RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 OSTNP61366 133 aa13.45□□□□□ -0.26
TRAIP-209ENST00000488860 ZCWPW2Q504Y3 356 aa13.45□□□□□ -0.26
TRAIP-209ENST00000488860 SEZ6Q53EL9 994 aa13.45□□□□□ -0.26
TRAIP-209ENST00000488860 TTI2Q6NXR4 508 aa13.45□□□□□ -0.26
TRAIP-209ENST00000488860 THNSL1Q8IYQ7 743 aa13.45□□□□□ -0.26
TRAIP-209ENST00000488860 RPUSD2Q8IZ73 545 aaKnown RBP13.45□□□□□ -0.26
TRAIP-209ENST00000488860 CSGALNACT2Q8N6G5 542 aa13.45□□□□□ -0.26
TRAIP-209ENST00000488860 CEP120Q8N960 986 aa13.45□□□□□ -0.26
TRAIP-209ENST00000488860 RNF169Q8NCN4 708 aa13.45□□□□□ -0.26
TRAIP-209ENST00000488860 LINC01599Q8WXQ3 324 aa13.45□□□□□ -0.26
TRAIP-209ENST00000488860 EEF2KMTQ96G04 330 aa13.45□□□□□ -0.26
TRAIP-209ENST00000488860 FTHL17Q9BXU8 183 aa13.45□□□□□ -0.26
TRAIP-209ENST00000488860 NXF3Q9H4D5 531 aaKnown RBP13.45□□□□□ -0.26
TRAIP-209ENST00000488860 IL23AQ9NPF7 189 aa13.45□□□□□ -0.26
TRAIP-209ENST00000488860 CHST12Q9NRB3 414 aa13.45□□□□□ -0.26
TRAIP-209ENST00000488860 HSPBP1Q9NZL4 362 aa13.45□□□□□ -0.26
TRAIP-209ENST00000488860 CGNQ9P2M7 1197 aaKnown RBP13.45□□□□□ -0.26
TRAIP-209ENST00000488860 AGO2Q9UKV8 859 aaKnown RBP13.45□□□□□ -0.26
TRAIP-209ENST00000488860 TRAF3IP3Q9Y228 551 aa13.45□□□□□ -0.26
TRAIP-209ENST00000488860 NR2E3Q9Y5X4 410 aa13.45□□□□□ -0.26
TRAIP-209ENST00000488860 FNDC1Q4ZHG4 1894 aaPredicted RBP13.44□□□□□ -0.26
TRAIP-209ENST00000488860 GBF1Q92538 1859 aa13.44□□□□□ -0.26
TRAIP-209ENST00000488860 ABLIM1O14639 778 aa13.44□□□□□ -0.26
TRAIP-209ENST00000488860 EXOC3O60645 756 aa13.44□□□□□ -0.26
TRAIP-209ENST00000488860 PFKMP08237 780 aa13.44□□□□□ -0.26
TRAIP-209ENST00000488860 RPL13P26373 211 aaKnown RBP13.44□□□□□ -0.26
TRAIP-209ENST00000488860 ADSSP30520 456 aa13.44□□□□□ -0.26
TRAIP-209ENST00000488860 SNRPFP62306 86 aaKnown RBP13.44□□□□□ -0.26
TRAIP-209ENST00000488860 MYL5Q02045 173 aa13.44□□□□□ -0.26
TRAIP-209ENST00000488860 MCL1Q07820 350 aa13.44□□□□□ -0.26
TRAIP-209ENST00000488860 DSC3Q14574 896 aa13.44□□□□□ -0.26
TRAIP-209ENST00000488860 EDRF1Q3B7T1 1238 aa13.44□□□□□ -0.26
TRAIP-209ENST00000488860 HSP90AA4PQ58FG1 418 aa13.44□□□□□ -0.26
TRAIP-209ENST00000488860 CT47A1Q5JQC4 288 aaPredicted RBP13.44□□□□□ -0.26
TRAIP-209ENST00000488860 ZBTB41Q5SVQ8 909 aa13.44□□□□□ -0.26
TRAIP-209ENST00000488860 UBXN11Q5T124 520 aa13.44□□□□□ -0.26
TRAIP-209ENST00000488860 C12orf56Q8IXR9 622 aa13.44□□□□□ -0.26
TRAIP-209ENST00000488860 ZSWIM2Q8NEG5 633 aa13.44□□□□□ -0.26
TRAIP-209ENST00000488860 DUSP9Q99956 384 aaKnown RBP13.44□□□□□ -0.26
TRAIP-209ENST00000488860 FAM213AQ9BRX8 229 aa13.44□□□□□ -0.26
TRAIP-209ENST00000488860 CBX8Q9HC52 389 aa13.44□□□□□ -0.26
TRAIP-209ENST00000488860 PTPRHQ9HD43 1115 aa13.44□□□□□ -0.26
TRAIP-209ENST00000488860 FAM105AQ9NUU6 356 aa13.44□□□□□ -0.26
TRAIP-209ENST00000488860 A0A0B4J269 797 aa13.43□□□□□ -0.26
TRAIP-209ENST00000488860 ZBBXA8MT70 800 aa13.43□□□□□ -0.26
TRAIP-209ENST00000488860 BECN2A8MW95 431 aa13.43□□□□□ -0.26
TRAIP-209ENST00000488860 CETN3O15182 167 aa13.43□□□□□ -0.26
TRAIP-209ENST00000488860 OGTO15294 1046 aa13.43□□□□□ -0.26
TRAIP-209ENST00000488860 ACTN1P12814 892 aa13.43□□□□□ -0.26
TRAIP-209ENST00000488860 TNFSF9P41273 254 aa13.43□□□□□ -0.26
TRAIP-209ENST00000488860 ACOT2P49753 483 aa13.43□□□□□ -0.26
TRAIP-209ENST00000488860 RAB27AP51159 221 aa13.43□□□□□ -0.26
TRAIP-209ENST00000488860 TTC3P53804 2025 aa13.43□□□□□ -0.26
TRAIP-209ENST00000488860 FKBP3Q00688 224 aaKnown RBP13.43□□□□□ -0.26
TRAIP-209ENST00000488860 ADAM9Q13443 819 aa13.43□□□□□ -0.26
TRAIP-209ENST00000488860 IKBKEQ14164 716 aa13.43□□□□□ -0.26
TRAIP-209ENST00000488860 CREBRFQ8IUR6 639 aa13.43□□□□□ -0.26
TRAIP-209ENST00000488860 GPD1LQ8N335 351 aa13.43□□□□□ -0.26
TRAIP-209ENST00000488860 XXYLT1Q8NBI6 393 aa13.43□□□□□ -0.26
TRAIP-209ENST00000488860 RDH13Q8NBN7 331 aa13.43□□□□□ -0.26
TRAIP-209ENST00000488860 RNF214Q8ND24 703 aa13.43□□□□□ -0.26
TRAIP-209ENST00000488860 BPIFA3Q9BQP9 254 aa13.43□□□□□ -0.26
TRAIP-209ENST00000488860 CCDC94Q9BW85 323 aaPredicted RBP13.43□□□□□ -0.26
TRAIP-209ENST00000488860 SRRTQ9BXP5 876 aaKnown RBP13.43□□□□□ -0.26
TRAIP-209ENST00000488860 RGS18Q9NS28 235 aa13.43□□□□□ -0.26
TRAIP-209ENST00000488860 C1orf112Q9NSG2 853 aa13.43□□□□□ -0.26
TRAIP-209ENST00000488860 SNTG2Q9NY99 539 aa13.43□□□□□ -0.26
TRAIP-209ENST00000488860 FRMD4BQ9Y2L6 1034 aa13.43□□□□□ -0.26
TRAIP-209ENST00000488860 NFE2L3Q9Y4A8 694 aa13.43□□□□□ -0.26
TRAIP-209ENST00000488860 HES2Q9Y543 173 aa13.43□□□□□ -0.26
TRAIP-209ENST00000488860 IPPQ9Y573 584 aa13.43□□□□□ -0.26
TRAIP-209ENST00000488860 PCDHB2Q9Y5E7 798 aa13.43□□□□□ -0.26
TRAIP-209ENST00000488860 STYXL1Q9Y6J8 313 aa13.43□□□□□ -0.26
TRAIP-209ENST00000488860 KIAA1671Q9BY89 1806 aa13.42□□□□□ -0.26
TRAIP-209ENST00000488860 KIAA0391O15091 583 aaKnown RBP13.42□□□□□ -0.26
TRAIP-209ENST00000488860 EXTL3O43909 919 aa13.42□□□□□ -0.26
TRAIP-209ENST00000488860 FGFR1OPO95684 399 aaKnown RBP13.42□□□□□ -0.26
TRAIP-209ENST00000488860 STAG3L1P0CL83 205 aa13.42□□□□□ -0.26
TRAIP-209ENST00000488860 EPB41P11171 864 aaKnown RBP13.42□□□□□ -0.26
TRAIP-209ENST00000488860 AKAP5P24588 427 aa13.42□□□□□ -0.26
TRAIP-209ENST00000488860 GRM5P41594 1212 aa13.42□□□□□ -0.26
TRAIP-209ENST00000488860 CASP4P49662 377 aa13.42□□□□□ -0.26
TRAIP-209ENST00000488860 NFIL3Q16649 462 aa13.42□□□□□ -0.26
TRAIP-209ENST00000488860 CCDC40Q4G0X9 1142 aa13.42□□□□□ -0.26
TRAIP-209ENST00000488860 SPATA1Q5VX52 437 aa13.42□□□□□ -0.26
TRAIP-209ENST00000488860 PSRC1Q6PGN9 363 aaPredicted RBP13.42□□□□□ -0.26
TRAIP-209ENST00000488860 LRRC55Q6ZSA7 311 aa13.42□□□□□ -0.26
TRAIP-209ENST00000488860 OTOP2Q7RTS6 562 aa13.42□□□□□ -0.26
TRAIP-209ENST00000488860 LUZP1Q86V48 1076 aa13.42□□□□□ -0.26
TRAIP-209ENST00000488860 CBWD2Q8IUF1 395 aa13.42□□□□□ -0.26
TRAIP-209ENST00000488860 SLC9A9Q8IVB4 645 aa13.42□□□□□ -0.26
TRAIP-209ENST00000488860 DHX40Q8IX18 779 aaKnown RBP13.42□□□□□ -0.26
TRAIP-209ENST00000488860 TMEM192Q8IY95 271 aa13.42□□□□□ -0.26
TRAIP-209ENST00000488860 FAM186BQ8IYM0 893 aa13.42□□□□□ -0.26
TRAIP-209ENST00000488860 HACE1Q8IYU2 909 aa13.42□□□□□ -0.26
TRAIP-209ENST00000488860 ENOX1Q8TC92 643 aaKnown RBP13.42□□□□□ -0.26
TRAIP-209ENST00000488860 FAM200AQ8TCP9 573 aa13.42□□□□□ -0.26
TRAIP-209ENST00000488860 LPPQ93052 612 aa13.42□□□□□ -0.26
TRAIP-209ENST00000488860 VWCEQ96DN2 955 aa13.42□□□□□ -0.26
TRAIP-209ENST00000488860 FAM212AQ96EL1 285 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms