RNA–Protein interactions for RNA: ENST00000488023.1

HFM1-208, Transcript of HFM1, ATP dependent DNA helicase homolog, humanhuman

TSL 5

Gene HFM1, Length 1,699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1-208ENST00000488023 ZNF496Q96IT1 587 aaPredicted RBP4.3□□□□□ -1.72
HFM1-208ENST00000488023 JAM3Q9BX67 310 aa4.3□□□□□ -1.72
HFM1-208ENST00000488023 PDGFDQ9GZP0 370 aaPredicted RBP4.3□□□□□ -1.72
HFM1-208ENST00000488023 ARFGAP3Q9NP61 516 aa4.3□□□□□ -1.72
HFM1-208ENST00000488023 PGAP2Q9UHJ9 254 aa4.3□□□□□ -1.72
HFM1-208ENST00000488023 SLC12A8A0AV02 714 aa4.29□□□□□ -1.72
HFM1-208ENST00000488023 ZNF561-AS1K7EIQ3 104 aa4.29□□□□□ -1.72
HFM1-208ENST00000488023 GOLIM4O00461 696 aa4.29□□□□□ -1.72
HFM1-208ENST00000488023 HGSO14964 777 aaPredicted RBP4.29□□□□□ -1.72
HFM1-208ENST00000488023 TADA3O75528 432 aa4.29□□□□□ -1.72
HFM1-208ENST00000488023 AMY2AP04746 511 aa4.29□□□□□ -1.72
HFM1-208ENST00000488023 AMY2BP19961 511 aa4.29□□□□□ -1.72
HFM1-208ENST00000488023 RRM1P23921 792 aa4.29□□□□□ -1.72
HFM1-208ENST00000488023 KIF11P52732 1056 aa4.29□□□□□ -1.72
HFM1-208ENST00000488023 LACTBP83111 547 aaPredicted RBP4.29□□□□□ -1.72
HFM1-208ENST00000488023 TNFAIP2Q03169 654 aa4.29□□□□□ -1.72
HFM1-208ENST00000488023 ZNF174Q15697 407 aa4.29□□□□□ -1.72
HFM1-208ENST00000488023 CT83Q5H943 113 aa4.29□□□□□ -1.72
HFM1-208ENST00000488023 EMC4Q5J8M3 183 aa4.29□□□□□ -1.72
HFM1-208ENST00000488023 DACT2Q5SW24 774 aa4.29□□□□□ -1.72
HFM1-208ENST00000488023 TLDC1Q6P9B6 456 aa4.29□□□□□ -1.72
HFM1-208ENST00000488023 CD300LDQ6UXZ3 194 aa4.29□□□□□ -1.72
HFM1-208ENST00000488023 LIMS2Q7Z4I7 341 aa4.29□□□□□ -1.72
HFM1-208ENST00000488023 MILR1Q7Z6M3 343 aa4.29□□□□□ -1.72
HFM1-208ENST00000488023 DRC7Q8IY82 874 aa4.29□□□□□ -1.72
HFM1-208ENST00000488023 KYQ8NBH2 561 aa4.29□□□□□ -1.72
HFM1-208ENST00000488023 NSUN6Q8TEA1 469 aaKnown RBP4.29□□□□□ -1.72
HFM1-208ENST00000488023 SH3RF2Q8TEC5 729 aa4.29□□□□□ -1.72
HFM1-208ENST00000488023 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.29□□□□□ -1.72
HFM1-208ENST00000488023 C1GALT1C1Q96EU7 318 aa4.29□□□□□ -1.72
HFM1-208ENST00000488023 CHAMP1Q96JM3 812 aa4.29□□□□□ -1.72
HFM1-208ENST00000488023 C11orf84Q9BUA3 381 aaPredicted RBP4.29□□□□□ -1.72
HFM1-208ENST00000488023 MYLK2Q9H1R3 596 aa4.29□□□□□ -1.72
HFM1-208ENST00000488023 EPB41L1Q9H4G0 881 aa4.29□□□□□ -1.72
HFM1-208ENST00000488023 CERS4Q9HA82 394 aa4.29□□□□□ -1.72
HFM1-208ENST00000488023 DMRT3Q9NQL9 472 aa4.29□□□□□ -1.72
HFM1-208ENST00000488023 CLDND1Q9NY35 253 aa4.29□□□□□ -1.72
HFM1-208ENST00000488023 CLIC5Q9NZA1 410 aa4.29□□□□□ -1.72
HFM1-208ENST00000488023 FBXO2Q9UK22 296 aaPredicted RBP4.29□□□□□ -1.72
HFM1-208ENST00000488023 CORO2BQ9UQ03 480 aa4.29□□□□□ -1.72
HFM1-208ENST00000488023 MROH6A6NGR9 719 aa4.29□□□□□ -1.72
HFM1-208ENST00000488023 J3KRW8 73 aa4.29□□□□□ -1.72
HFM1-208ENST00000488023 FZD7O75084 574 aa4.29□□□□□ -1.72
HFM1-208ENST00000488023 DGKIO75912 1065 aa4.29□□□□□ -1.72
HFM1-208ENST00000488023 ENPP1P22413 925 aa4.29□□□□□ -1.72
HFM1-208ENST00000488023 RPL13P26373 211 aaKnown RBP4.29□□□□□ -1.72
HFM1-208ENST00000488023 HTR1BP28222 390 aa4.29□□□□□ -1.72
HFM1-208ENST00000488023 THBS2P35442 1172 aa4.29□□□□□ -1.72
HFM1-208ENST00000488023 POU5F1Q01860 360 aaKnown RBP4.29□□□□□ -1.72
HFM1-208ENST00000488023 CNN3Q15417 329 aaKnown RBP4.29□□□□□ -1.72
HFM1-208ENST00000488023 CDSNQ15517 529 aa4.29□□□□□ -1.72
HFM1-208ENST00000488023 ANO4Q32M45 955 aa4.29□□□□□ -1.72
HFM1-208ENST00000488023 PGS1Q32NB8 556 aa4.29□□□□□ -1.72
HFM1-208ENST00000488023 FAM26FQ5R3K3 315 aa4.29□□□□□ -1.72
HFM1-208ENST00000488023 ICE2Q659A1 982 aa4.29□□□□□ -1.72
HFM1-208ENST00000488023 GLB1LQ6UWU2 654 aa4.29□□□□□ -1.72
HFM1-208ENST00000488023 FRMD7Q6ZUT3 714 aa4.29□□□□□ -1.72
HFM1-208ENST00000488023 PRR18Q8N4B5 295 aa4.29□□□□□ -1.72
HFM1-208ENST00000488023 PHOSPHO1Q8TCT1 267 aa4.29□□□□□ -1.72
HFM1-208ENST00000488023 RTF1Q92541 710 aaKnown RBP4.29□□□□□ -1.72
HFM1-208ENST00000488023 COA7Q96BR5 231 aa4.29□□□□□ -1.72
HFM1-208ENST00000488023 EAF2Q96CJ1 260 aaPredicted RBP4.29□□□□□ -1.72
HFM1-208ENST00000488023 GCC1Q96CN9 775 aa4.29□□□□□ -1.72
HFM1-208ENST00000488023 ERP27Q96DN0 273 aa4.29□□□□□ -1.72
HFM1-208ENST00000488023 TBATAQ96M53 351 aa4.29□□□□□ -1.72
HFM1-208ENST00000488023 GORASP1Q9BQQ3 440 aa4.29□□□□□ -1.72
HFM1-208ENST00000488023 ANO3Q9BYT9 981 aa4.29□□□□□ -1.72
HFM1-208ENST00000488023 SEMA4AQ9H3S1 761 aa4.29□□□□□ -1.72
HFM1-208ENST00000488023 PCIF1Q9H4Z3 704 aa4.29□□□□□ -1.72
HFM1-208ENST00000488023 AGO4Q9HCK5 861 aaKnown RBP4.29□□□□□ -1.72
HFM1-208ENST00000488023 RABGAP1Q9Y3P9 1069 aa4.29□□□□□ -1.72
HFM1-208ENST00000488023 TSC22D4Q9Y3Q8 395 aa4.29□□□□□ -1.72
HFM1-208ENST00000488023 PCDHB4Q9Y5E5 795 aa4.29□□□□□ -1.72
HFM1-208ENST00000488023 ZNF536O15090 1300 aa4.28□□□□□ -1.72
HFM1-208ENST00000488023 A0A087WV62 115 aa4.28□□□□□ -1.72
HFM1-208ENST00000488023 A6NCN8 305 aa4.28□□□□□ -1.72
HFM1-208ENST00000488023 NKRFO15226 690 aaKnown RBP eCLIP4.28□□□□□ -1.722e-12■■□□□ 14.5
HFM1-208ENST00000488023 MAFKO60675 156 aa4.28□□□□□ -1.72
HFM1-208ENST00000488023 DDIT3P35638 169 aa4.28□□□□□ -1.72
HFM1-208ENST00000488023 NKX3-2P78367 333 aa4.28□□□□□ -1.72
HFM1-208ENST00000488023 BTKQ06187 659 aa4.28□□□□□ -1.72
HFM1-208ENST00000488023 FSCN1Q16658 493 aaKnown RBP4.28□□□□□ -1.72
HFM1-208ENST00000488023 CCDC38Q502W7 563 aa4.28□□□□□ -1.72
HFM1-208ENST00000488023 FAM209BQ5JX69 171 aa4.28□□□□□ -1.72
HFM1-208ENST00000488023 STEAP3Q658P3 488 aa4.28□□□□□ -1.72
HFM1-208ENST00000488023 CYP4F22Q6NT55 531 aa4.28□□□□□ -1.72
HFM1-208ENST00000488023 FAM180BQ6P0A1 224 aa4.28□□□□□ -1.72
HFM1-208ENST00000488023 CFAP161Q6P656 301 aa4.28□□□□□ -1.72
HFM1-208ENST00000488023 BORAQ6PGQ7 559 aa4.28□□□□□ -1.72
HFM1-208ENST00000488023 USP51Q70EK9 711 aa4.28□□□□□ -1.72
HFM1-208ENST00000488023 RSRC2Q7L4I2 434 aaKnown RBP4.28□□□□□ -1.72
HFM1-208ENST00000488023 KCNK18Q7Z418 384 aa4.28□□□□□ -1.72
HFM1-208ENST00000488023 KRT78Q8N1N4 520 aa4.28□□□□□ -1.72
HFM1-208ENST00000488023 TRIM63Q969Q1 353 aa4.28□□□□□ -1.72
HFM1-208ENST00000488023 TBC1D20Q96BZ9 403 aa4.28□□□□□ -1.72
HFM1-208ENST00000488023 SYT3Q9BQG1 590 aa4.28□□□□□ -1.72
HFM1-208ENST00000488023 CENPOQ9BU64 300 aa4.28□□□□□ -1.72
HFM1-208ENST00000488023 ISCA1Q9BUE6 129 aa4.28□□□□□ -1.72
HFM1-208ENST00000488023 NUP62CLQ9H1M0 184 aa4.28□□□□□ -1.72
HFM1-208ENST00000488023 SMC4Q9NTJ3 1288 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms