RNA–Protein interactions for RNA: ENST00000487572.5

SEC22A-208, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 870 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-208ENST00000487572 PARP2Q9UGN5 583 aa21.45■■□□□ 1.02
SEC22A-208ENST00000487572 PCDHB13Q9Y5F0 798 aa21.45■■□□□ 1.02
SEC22A-208ENST00000487572 MRPL42Q9Y6G3 142 aaKnown RBP21.45■■□□□ 1.02
SEC22A-208ENST00000487572 TMEM265A0A087WTH1 108 aa21.44■■□□□ 1.02
SEC22A-208ENST00000487572 TOM1L1O75674 476 aa21.44■■□□□ 1.02
SEC22A-208ENST00000487572 PPP1R37O75864 691 aa21.44■■□□□ 1.02
SEC22A-208ENST00000487572 PRPF6O94906 941 aaKnown RBP21.44■■□□□ 1.02
SEC22A-208ENST00000487572 MYL1P05976 194 aa21.44■■□□□ 1.02
SEC22A-208ENST00000487572 KCNA1Q09470 495 aa21.44■■□□□ 1.02
SEC22A-208ENST00000487572 POSTNQ15063 836 aa21.44■■□□□ 1.02
SEC22A-208ENST00000487572 SPOUT1Q5T280 376 aaKnown RBP21.44■■□□□ 1.02
SEC22A-208ENST00000487572 GPR153Q6NV75 609 aa21.44■■□□□ 1.02
SEC22A-208ENST00000487572 CLEC17AQ6ZS10 378 aa21.44■■□□□ 1.02
SEC22A-208ENST00000487572 DEFB123Q8N688 67 aa21.44■■□□□ 1.02
SEC22A-208ENST00000487572 ARNTL2Q8WYA1 636 aa21.44■■□□□ 1.02
SEC22A-208ENST00000487572 KCNN1Q92952 543 aa21.44■■□□□ 1.02
SEC22A-208ENST00000487572 HVCN1Q96D96 273 aa21.44■■□□□ 1.02
SEC22A-208ENST00000487572 TGS1Q96RS0 853 aaKnown RBP21.44■■□□□ 1.02
SEC22A-208ENST00000487572 C17orf80Q9BSJ5 609 aa21.44■■□□□ 1.02
SEC22A-208ENST00000487572 IKZF4Q9H2S9 585 aa21.44■■□□□ 1.02
SEC22A-208ENST00000487572 SEMA6BQ9H3T3 888 aa21.44■■□□□ 1.02
SEC22A-208ENST00000487572 SNTG2Q9NY99 539 aa21.44■■□□□ 1.02
SEC22A-208ENST00000487572 HCSTQ9UBK5 93 aa21.44■■□□□ 1.02
SEC22A-208ENST00000487572 GDAQ9Y2T3 454 aa21.44■■□□□ 1.02
SEC22A-208ENST00000487572 KLRC4O43908 158 aa21.43■■□□□ 1.02
SEC22A-208ENST00000487572 KINO60870 393 aaKnown RBP21.43■■□□□ 1.02
SEC22A-208ENST00000487572 OFD1O75665 1012 aa21.43■■□□□ 1.02
SEC22A-208ENST00000487572 RPN1P04843 607 aaKnown RBP21.43■■□□□ 1.02
SEC22A-208ENST00000487572 PROZP22891 400 aa21.43■■□□□ 1.02
SEC22A-208ENST00000487572 MLH1P40692 756 aa21.43■■□□□ 1.02
SEC22A-208ENST00000487572 OSTNP61366 133 aa21.43■■□□□ 1.02
SEC22A-208ENST00000487572 DPYDQ12882 1025 aa21.43■■□□□ 1.02
SEC22A-208ENST00000487572 PNOCQ13519 176 aa21.43■■□□□ 1.02
SEC22A-208ENST00000487572 ALCAMQ13740 583 aa21.43■■□□□ 1.02
SEC22A-208ENST00000487572 NOLC1Q14978 699 aaKnown RBP eCLIP21.43■■□□□ 1.02
SEC22A-208ENST00000487572 KMT5BQ4FZB7 885 aa21.43■■□□□ 1.02
SEC22A-208ENST00000487572 L1TD1Q5T7N2 865 aaKnown RBP21.43■■□□□ 1.02
SEC22A-208ENST00000487572 STXBP4Q6ZWJ1 553 aa21.43■■□□□ 1.02
SEC22A-208ENST00000487572 SYCP3Q8IZU3 236 aa21.43■■□□□ 1.02
SEC22A-208ENST00000487572 LRRC43Q8N309 656 aa21.43■■□□□ 1.02
SEC22A-208ENST00000487572 URGCPQ8TCY9 931 aa21.43■■□□□ 1.02
SEC22A-208ENST00000487572 ACCSQ96QU6 501 aa21.43■■□□□ 1.02
SEC22A-208ENST00000487572 STRA6Q9BX79 667 aa21.43■■□□□ 1.02
SEC22A-208ENST00000487572 SLC39A2Q9NP94 309 aa21.43■■□□□ 1.02
SEC22A-208ENST00000487572 UBN1Q9NPG3 1134 aa21.43■■□□□ 1.02
SEC22A-208ENST00000487572 TYW1Q9NV66 732 aaKnown RBP21.43■■□□□ 1.02
SEC22A-208ENST00000487572 KLK14Q9P0G3 267 aa21.43■■□□□ 1.02
SEC22A-208ENST00000487572 TISP43B9A030 160 aa21.42■■□□□ 1.02
SEC22A-208ENST00000487572 ABLIM1O14639 778 aa21.42■■□□□ 1.02
SEC22A-208ENST00000487572 CLDN3O15551 220 aa21.42■■□□□ 1.02
SEC22A-208ENST00000487572 MCF2P10911 925 aa21.42■■□□□ 1.02
SEC22A-208ENST00000487572 EHHADHQ08426 723 aa21.42■■□□□ 1.02
SEC22A-208ENST00000487572 NOMO2Q5JPE7 1267 aa21.42■■□□□ 1.02
SEC22A-208ENST00000487572 THNSL1Q8IYQ7 743 aa21.42■■□□□ 1.02
SEC22A-208ENST00000487572 CEP120Q8N960 986 aa21.42■■□□□ 1.02
SEC22A-208ENST00000487572 ZFP42Q96MM3 310 aa21.42■■□□□ 1.02
SEC22A-208ENST00000487572 GAD1Q99259 594 aa21.42■■□□□ 1.02
SEC22A-208ENST00000487572 MRPL9Q9BYD2 267 aaKnown RBP21.42■■□□□ 1.02
SEC22A-208ENST00000487572 EXOC7Q9UPT5 735 aa21.42■■□□□ 1.02
SEC22A-208ENST00000487572 ARL5CA6NH57 179 aa21.41■■□□□ 1.02
SEC22A-208ENST00000487572 ANKRD63C9JTQ0 380 aa21.41■■□□□ 1.02
SEC22A-208ENST00000487572 RECQL4O94761 1208 aa21.41■■□□□ 1.02
SEC22A-208ENST00000487572 POMCP01189 267 aa21.41■■□□□ 1.02
SEC22A-208ENST00000487572 PIGRP01833 764 aa21.41■■□□□ 1.02
SEC22A-208ENST00000487572 CTNNB1P35222 781 aa21.41■■□□□ 1.02
SEC22A-208ENST00000487572 AFF1P51825 1210 aaKnown RBP21.41■■□□□ 1.02
SEC22A-208ENST00000487572 ERVK-21P61565 698 aa21.41■■□□□ 1.02
SEC22A-208ENST00000487572 RNASELQ05823 741 aaKnown RBP21.41■■□□□ 1.02
SEC22A-208ENST00000487572 GRIN2CQ14957 1233 aa21.41■■□□□ 1.02
SEC22A-208ENST00000487572 SEZ6Q53EL9 994 aa21.41■■□□□ 1.02
SEC22A-208ENST00000487572 SLC39A4Q6P5W5 647 aa21.41■■□□□ 1.02
SEC22A-208ENST00000487572 LRRC55Q6ZSA7 311 aa21.41■■□□□ 1.02
SEC22A-208ENST00000487572 TMEM192Q8IY95 271 aa21.41■■□□□ 1.02
SEC22A-208ENST00000487572 CCDC47Q96A33 483 aaKnown RBP21.41■■□□□ 1.02
SEC22A-208ENST00000487572 TIGD1Q96MW7 591 aa21.41■■□□□ 1.02
SEC22A-208ENST00000487572 HAPLN2Q9GZV7 340 aa21.41■■□□□ 1.02
SEC22A-208ENST00000487572 GBP3Q9H0R5 595 aa21.41■■□□□ 1.02
SEC22A-208ENST00000487572 PRDM12Q9H4Q4 367 aa21.41■■□□□ 1.02
SEC22A-208ENST00000487572 TBC1D13Q9NVG8 400 aa21.41■■□□□ 1.02
SEC22A-208ENST00000487572 GIT1Q9Y2X7 761 aa21.41■■□□□ 1.02
SEC22A-208ENST00000487572 FNDC1Q4ZHG4 1894 aaPredicted RBP21.41■■□□□ 1.02
SEC22A-208ENST00000487572 SCNN1GP51170 649 aa21.4■■□□□ 1.02
SEC22A-208ENST00000487572 MCL1Q07820 350 aa21.4■■□□□ 1.02
SEC22A-208ENST00000487572 EPC2Q52LR7 807 aa21.4■■□□□ 1.02
SEC22A-208ENST00000487572 ERCC4Q92889 916 aaPredicted RBP21.4■■□□□ 1.02
SEC22A-208ENST00000487572 MSTO1Q9BUK6 570 aa21.4■■□□□ 1.02
SEC22A-208ENST00000487572 CCDC94Q9BW85 323 aaPredicted RBP21.4■■□□□ 1.02
SEC22A-208ENST00000487572 HOOK1Q9UJC3 728 aaKnown RBP21.4■■□□□ 1.02
SEC22A-208ENST00000487572 EPOPA6NHQ4 379 aa21.39■■□□□ 1.01
SEC22A-208ENST00000487572 RFXAPO00287 272 aa21.39■■□□□ 1.01
SEC22A-208ENST00000487572 EIF3DO15371 548 aaKnown RBP eCLIP21.39■■□□□ 1.01
SEC22A-208ENST00000487572 LINC00271P0C7V0 271 aa21.39■■□□□ 1.01
SEC22A-208ENST00000487572 GRM5P41594 1212 aa21.39■■□□□ 1.01
SEC22A-208ENST00000487572 EPM2AIP1Q7L775 607 aaPredicted RBP21.39■■□□□ 1.01
SEC22A-208ENST00000487572 NELFCDQ8IXH7 590 aa21.39■■□□□ 1.01
SEC22A-208ENST00000487572 FBXO22Q8NEZ5 403 aa21.39■■□□□ 1.01
SEC22A-208ENST00000487572 CLP1Q92989 425 aaKnown RBP21.39■■□□□ 1.01
SEC22A-208ENST00000487572 RPS6KC1Q96S38 1066 aa21.39■■□□□ 1.01
SEC22A-208ENST00000487572 CWH43Q9H720 699 aa21.39■■□□□ 1.01
SEC22A-208ENST00000487572 TMEM206Q9H813 350 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms