RNA–Protein interactions for RNA: ENST00000487485.1

TOP3B-216, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 725 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-216ENST00000487485 TMX1Q9H3N1 280 aa11.75□□□□□ -0.53
TOP3B-216ENST00000487485 FZD8Q9H461 694 aa11.75□□□□□ -0.53
TOP3B-216ENST00000487485 TMEM134Q9H6X4 195 aa11.75□□□□□ -0.53
TOP3B-216ENST00000487485 PRMT7Q9NVM4 692 aaPredicted RBP11.75□□□□□ -0.53
TOP3B-216ENST00000487485 TBC1D7Q9P0N9 293 aa11.75□□□□□ -0.53
TOP3B-216ENST00000487485 ARHGAP28Q9P2N2 729 aa11.75□□□□□ -0.53
TOP3B-216ENST00000487485 SEL1LQ9UBV2 794 aa11.75□□□□□ -0.53
TOP3B-216ENST00000487485 USP34Q70CQ2 3546 aa11.74□□□□□ -0.53
TOP3B-216ENST00000487485 NLRC5Q86WI3 1866 aa11.74□□□□□ -0.53
TOP3B-216ENST00000487485 FAM186AA6NE01 2351 aa11.74□□□□□ -0.53
TOP3B-216ENST00000487485 DENND3A2RUS2 1198 aa11.74□□□□□ -0.53
TOP3B-216ENST00000487485 H0YCG3 227 aa11.74□□□□□ -0.53
TOP3B-216ENST00000487485 K7ENM7 598 aa11.74□□□□□ -0.53
TOP3B-216ENST00000487485 ENPP3O14638 875 aa11.74□□□□□ -0.53
TOP3B-216ENST00000487485 KLRC4O43908 158 aa11.74□□□□□ -0.53
TOP3B-216ENST00000487485 TSPAN1O60635 241 aa11.74□□□□□ -0.53
TOP3B-216ENST00000487485 PRKCBP05771 671 aa11.74□□□□□ -0.53
TOP3B-216ENST00000487485 MAPTP10636 758 aaKnown RBP11.74□□□□□ -0.53
TOP3B-216ENST00000487485 NMT1P30419 496 aaKnown RBP11.74□□□□□ -0.53
TOP3B-216ENST00000487485 MCM4P33991 863 aa11.74□□□□□ -0.53
TOP3B-216ENST00000487485 NCBP1Q09161 790 aaKnown RBP11.74□□□□□ -0.53
TOP3B-216ENST00000487485 DPYDQ12882 1025 aa11.74□□□□□ -0.53
TOP3B-216ENST00000487485 PNOCQ13519 176 aa11.74□□□□□ -0.53
TOP3B-216ENST00000487485 MAPK6Q16659 721 aa11.74□□□□□ -0.53
TOP3B-216ENST00000487485 AMHR2Q16671 573 aa11.74□□□□□ -0.53
TOP3B-216ENST00000487485 FAM187BQ17R55 369 aa11.74□□□□□ -0.53
TOP3B-216ENST00000487485 CTC1Q2NKJ3 1217 aa11.74□□□□□ -0.53
TOP3B-216ENST00000487485 IER5LQ5T953 404 aa11.74□□□□□ -0.53
TOP3B-216ENST00000487485 FAM43BQ6ZT52 329 aaPredicted RBP11.74□□□□□ -0.53
TOP3B-216ENST00000487485 ZNF720Q7Z2F6 126 aa11.74□□□□□ -0.53
TOP3B-216ENST00000487485 RTN4RL1Q86UN2 441 aaPredicted RBP11.74□□□□□ -0.53
TOP3B-216ENST00000487485 RNF135Q8IUD6 432 aa11.74□□□□□ -0.53
TOP3B-216ENST00000487485 ELOA2Q8IYF1 753 aaPredicted RBP11.74□□□□□ -0.53
TOP3B-216ENST00000487485 PRIMPOLQ96LW4 560 aa11.74□□□□□ -0.53
TOP3B-216ENST00000487485 CCDC113Q9H0I3 377 aa11.74□□□□□ -0.53
TOP3B-216ENST00000487485 MRPL44Q9H9J2 332 aaKnown RBP11.74□□□□□ -0.53
TOP3B-216ENST00000487485 CHST12Q9NRB3 414 aa11.74□□□□□ -0.53
TOP3B-216ENST00000487485 OLFML3Q9NRN5 406 aa11.74□□□□□ -0.53
TOP3B-216ENST00000487485 AGPAT5Q9NUQ2 364 aa11.74□□□□□ -0.53
TOP3B-216ENST00000487485 HOOK1Q9UJC3 728 aaKnown RBP11.74□□□□□ -0.53
TOP3B-216ENST00000487485 ACKR2O00590 384 aa11.73□□□□□ -0.53
TOP3B-216ENST00000487485 GRM6O15303 877 aa11.73□□□□□ -0.53
TOP3B-216ENST00000487485 B4GALT5O43286 388 aa11.73□□□□□ -0.53
TOP3B-216ENST00000487485 MBTPS2O43462 519 aa11.73□□□□□ -0.53
TOP3B-216ENST00000487485 NCK2O43639 380 aa11.73□□□□□ -0.53
TOP3B-216ENST00000487485 MGEA5O60502 916 aa11.73□□□□□ -0.53
TOP3B-216ENST00000487485 RPN1P04843 607 aaKnown RBP11.73□□□□□ -0.53
TOP3B-216ENST00000487485 LINC00271P0C7V0 271 aa11.73□□□□□ -0.53
TOP3B-216ENST00000487485 ARF4P18085 180 aaPredicted RBP11.73□□□□□ -0.53
TOP3B-216ENST00000487485 SCP2P22307 547 aa11.73□□□□□ -0.53
TOP3B-216ENST00000487485 AXLP30530 894 aa11.73□□□□□ -0.53
TOP3B-216ENST00000487485 HOXA11P31270 313 aaPredicted RBP11.73□□□□□ -0.53
TOP3B-216ENST00000487485 GTF2F1P35269 517 aaKnown RBP eCLIP11.73□□□□□ -0.53
TOP3B-216ENST00000487485 GTF2BQ00403 316 aa11.73□□□□□ -0.53
TOP3B-216ENST00000487485 HYAL1Q12794 435 aa11.73□□□□□ -0.53
TOP3B-216ENST00000487485 STRN3Q13033 797 aa11.73□□□□□ -0.53
TOP3B-216ENST00000487485 PRPF4BQ13523 1007 aaKnown RBP11.73□□□□□ -0.53
TOP3B-216ENST00000487485 DSC3Q14574 896 aa11.73□□□□□ -0.53
TOP3B-216ENST00000487485 SMAD2Q15796 467 aaKnown RBP11.73□□□□□ -0.53
TOP3B-216ENST00000487485 ATG2AQ2TAZ0 1938 aa11.73□□□□□ -0.53
TOP3B-216ENST00000487485 KMT5BQ4FZB7 885 aa11.73□□□□□ -0.53
TOP3B-216ENST00000487485 ZC2HC1CQ53FD0 456 aaPredicted RBP11.73□□□□□ -0.53
TOP3B-216ENST00000487485 PPP4R3CPQ6ZMV5 832 aa11.73□□□□□ -0.53
TOP3B-216ENST00000487485 PHLPP2Q6ZVD8 1323 aa11.73□□□□□ -0.53
TOP3B-216ENST00000487485 TAS1R3Q7RTX0 852 aa11.73□□□□□ -0.53
TOP3B-216ENST00000487485 PRSS33Q8NF86 280 aa11.73□□□□□ -0.53
TOP3B-216ENST00000487485 LINC01599Q8WXQ3 324 aa11.73□□□□□ -0.53
TOP3B-216ENST00000487485 HPS3Q969F9 1004 aa11.73□□□□□ -0.53
TOP3B-216ENST00000487485 CPB2Q96IY4 423 aa11.73□□□□□ -0.53
TOP3B-216ENST00000487485 ADAM2Q99965 735 aa11.73□□□□□ -0.53
TOP3B-216ENST00000487485 ST6GALNAC4Q9H4F1 302 aa11.73□□□□□ -0.53
TOP3B-216ENST00000487485 RGS18Q9NS28 235 aa11.73□□□□□ -0.53
TOP3B-216ENST00000487485 PIN4Q9Y237 131 aaKnown RBP11.73□□□□□ -0.53
TOP3B-216ENST00000487485 USP20Q9Y2K6 914 aa11.73□□□□□ -0.53
TOP3B-216ENST00000487485 TTLL13PA6NNM8 815 aa11.72□□□□□ -0.53
TOP3B-216ENST00000487485 GCNT3O95395 438 aa11.72□□□□□ -0.53
TOP3B-216ENST00000487485 EDN1P05305 212 aa11.72□□□□□ -0.53
TOP3B-216ENST00000487485 MYBP10242 640 aa11.72□□□□□ -0.53
TOP3B-216ENST00000487485 ABCD1P33897 745 aa11.72□□□□□ -0.53
TOP3B-216ENST00000487485 CTNNB1P35222 781 aa11.72□□□□□ -0.53
TOP3B-216ENST00000487485 BMPR1AP36894 532 aa11.72□□□□□ -0.53
TOP3B-216ENST00000487485 CASP5P51878 434 aa11.72□□□□□ -0.53
TOP3B-216ENST00000487485 EHHADHQ08426 723 aa11.72□□□□□ -0.53
TOP3B-216ENST00000487485 PSMD2Q13200 908 aa11.72□□□□□ -0.53
TOP3B-216ENST00000487485 CAMK4Q16566 473 aa11.72□□□□□ -0.53
TOP3B-216ENST00000487485 TMEM132AQ24JP5 1023 aa11.72□□□□□ -0.53
TOP3B-216ENST00000487485 FAM26FQ5R3K3 315 aa11.72□□□□□ -0.53
TOP3B-216ENST00000487485 NT5DC1Q5TFE4 455 aa11.72□□□□□ -0.53
TOP3B-216ENST00000487485 TWF2Q6IBS0 349 aaKnown RBP11.72□□□□□ -0.53
TOP3B-216ENST00000487485 CDR2LQ86X02 465 aaPredicted RBP11.72□□□□□ -0.53
TOP3B-216ENST00000487485 FIBCD1Q8N539 461 aa11.72□□□□□ -0.53
TOP3B-216ENST00000487485 GPT2Q8TD30 523 aa11.72□□□□□ -0.53
TOP3B-216ENST00000487485 EDAQ92838 391 aa11.72□□□□□ -0.53
TOP3B-216ENST00000487485 ERCC4Q92889 916 aaPredicted RBP11.72□□□□□ -0.53
TOP3B-216ENST00000487485 KCNN1Q92952 543 aa11.72□□□□□ -0.53
TOP3B-216ENST00000487485 CCDC47Q96A33 483 aaKnown RBP11.72□□□□□ -0.53
TOP3B-216ENST00000487485 STRA6Q9BX79 667 aa11.72□□□□□ -0.53
TOP3B-216ENST00000487485 FGFBP2Q9BYJ0 223 aa11.72□□□□□ -0.53
TOP3B-216ENST00000487485 IGFLR1Q9H665 355 aa11.72□□□□□ -0.53
TOP3B-216ENST00000487485 SLC39A2Q9NP94 309 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms