RNA–Protein interactions for RNA: ENST00000487118.1

NUDCD3-209, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-209ENST00000487118 DAAM1Q9Y4D1 1078 aa9.36□□□□□ -0.91
NUDCD3-209ENST00000487118 PTCH2Q9Y6C5 1203 aa9.36□□□□□ -0.91
NUDCD3-209ENST00000487118 SMIM35A0A1B0GVV1 85 aa9.35□□□□□ -0.91
NUDCD3-209ENST00000487118 MYADML2A6NDP7 307 aa9.35□□□□□ -0.91
NUDCD3-209ENST00000487118 ZNF233A6NK53 670 aa9.35□□□□□ -0.91
NUDCD3-209ENST00000487118 CEP290O15078 2479 aa9.35□□□□□ -0.91
NUDCD3-209ENST00000487118 ADAMTS4O75173 837 aa9.35□□□□□ -0.91
NUDCD3-209ENST00000487118 TOM1L1O75674 476 aa9.35□□□□□ -0.91
NUDCD3-209ENST00000487118 LDHAP00338 332 aaKnown RBP9.35□□□□□ -0.91
NUDCD3-209ENST00000487118 HMGCRP04035 888 aa9.35□□□□□ -0.91
NUDCD3-209ENST00000487118 RARBP10826 455 aa9.35□□□□□ -0.91
NUDCD3-209ENST00000487118 SLC9A1P19634 815 aa9.35□□□□□ -0.91
NUDCD3-209ENST00000487118 PROZP22891 400 aa9.35□□□□□ -0.91
NUDCD3-209ENST00000487118 CST5P28325 142 aaPredicted RBP9.35□□□□□ -0.91
NUDCD3-209ENST00000487118 GTF2H1P32780 548 aa9.35□□□□□ -0.91
NUDCD3-209ENST00000487118 GPC3P51654 580 aa9.35□□□□□ -0.91
NUDCD3-209ENST00000487118 PRMT2P55345 433 aa9.35□□□□□ -0.91
NUDCD3-209ENST00000487118 DLG4P78352 724 aa9.35□□□□□ -0.91
NUDCD3-209ENST00000487118 CLDN10P78369 228 aa9.35□□□□□ -0.91
NUDCD3-209ENST00000487118 CDC42EP1Q00587 391 aa9.35□□□□□ -0.91
NUDCD3-209ENST00000487118 MYL7Q01449 175 aa9.35□□□□□ -0.91
NUDCD3-209ENST00000487118 PPP3CAQ08209 521 aa9.35□□□□□ -0.91
NUDCD3-209ENST00000487118 HIC1Q14526 733 aa9.35□□□□□ -0.91
NUDCD3-209ENST00000487118 PSMD6Q15008 389 aa9.35□□□□□ -0.91
NUDCD3-209ENST00000487118 AMHR2Q16671 573 aa9.35□□□□□ -0.91
NUDCD3-209ENST00000487118 CBWD6Q4V339 395 aa9.35□□□□□ -0.91
NUDCD3-209ENST00000487118 CBWD3Q5JTY5 395 aa9.35□□□□□ -0.91
NUDCD3-209ENST00000487118 CBWD5Q5RIA9 395 aa9.35□□□□□ -0.91
NUDCD3-209ENST00000487118 KLHDC7AQ5VTJ3 777 aa9.35□□□□□ -0.91
NUDCD3-209ENST00000487118 NFRKBQ6P4R8 1299 aa9.35□□□□□ -0.91
NUDCD3-209ENST00000487118 WDR59Q6PJI9 974 aa9.35□□□□□ -0.91
NUDCD3-209ENST00000487118 CRELD2Q6UXH1 353 aaPredicted RBP9.35□□□□□ -0.91
NUDCD3-209ENST00000487118 CYP26C1Q6V0L0 522 aa9.35□□□□□ -0.91
NUDCD3-209ENST00000487118 RAD9BQ6WBX8 426 aa9.35□□□□□ -0.91
NUDCD3-209ENST00000487118 TSHZ1Q6ZSZ6 1077 aa9.35□□□□□ -0.91
NUDCD3-209ENST00000487118 KIAA0319LQ8IZA0 1049 aa9.35□□□□□ -0.91
NUDCD3-209ENST00000487118 CCAR2Q8N163 923 aaKnown RBP9.35□□□□□ -0.91
NUDCD3-209ENST00000487118 PXYLP1Q8TE99 480 aa9.35□□□□□ -0.91
NUDCD3-209ENST00000487118 PARD3BQ8TEW8 1205 aa9.35□□□□□ -0.91
NUDCD3-209ENST00000487118 SH3TC2Q8TF17 1288 aa9.35□□□□□ -0.91
NUDCD3-209ENST00000487118 SYN2Q92777 582 aaPredicted RBP9.35□□□□□ -0.91
NUDCD3-209ENST00000487118 ARMC5Q96C12 935 aa9.35□□□□□ -0.91
NUDCD3-209ENST00000487118 ERO1AQ96HE7 468 aa9.35□□□□□ -0.91
NUDCD3-209ENST00000487118 ZBTB45Q96K62 511 aaPredicted RBP9.35□□□□□ -0.91
NUDCD3-209ENST00000487118 NLRP4Q96MN2 994 aa9.35□□□□□ -0.91
NUDCD3-209ENST00000487118 MAP7D2Q96T17 732 aa9.35□□□□□ -0.91
NUDCD3-209ENST00000487118 CRACR2AQ9BSW2 395 aa9.35□□□□□ -0.91
NUDCD3-209ENST00000487118 MTG1Q9BT17 334 aaPredicted RBP9.35□□□□□ -0.91
NUDCD3-209ENST00000487118 NUCKS1Q9H1E3 243 aaKnown RBP9.35□□□□□ -0.91
NUDCD3-209ENST00000487118 SPC25Q9HBM1 224 aa9.35□□□□□ -0.91
NUDCD3-209ENST00000487118 PTPRHQ9HD43 1115 aa9.35□□□□□ -0.91
NUDCD3-209ENST00000487118 PRMT7Q9NVM4 692 aaPredicted RBP9.35□□□□□ -0.91
NUDCD3-209ENST00000487118 AGO2Q9UKV8 859 aaKnown RBP9.35□□□□□ -0.91
NUDCD3-209ENST00000487118 MYO6Q9UM54 1294 aa9.35□□□□□ -0.91
NUDCD3-209ENST00000487118 UNC80Q8N2C7 3258 aa9.35□□□□□ -0.91
NUDCD3-209ENST00000487118 ALPK3Q96L96 1907 aa9.35□□□□□ -0.91
NUDCD3-209ENST00000487118 CNTNAP2Q9UHC6 1331 aa9.34□□□□□ -0.91
NUDCD3-209ENST00000487118 A0A087WZ62 844 aa9.34□□□□□ -0.91
NUDCD3-209ENST00000487118 SOWAHDA6NJG2 315 aa9.34□□□□□ -0.91
NUDCD3-209ENST00000487118 TTLL13PA6NNM8 815 aa9.34□□□□□ -0.91
NUDCD3-209ENST00000487118 LRRIQ3A6PVS8 624 aaPredicted RBP9.34□□□□□ -0.91
NUDCD3-209ENST00000487118 INO80B-WBP1J3KQ70 363 aa9.34□□□□□ -0.91
NUDCD3-209ENST00000487118 CCP110O43303 1012 aa9.34□□□□□ -0.91
NUDCD3-209ENST00000487118 ZEB2O60315 1214 aa9.34□□□□□ -0.91
NUDCD3-209ENST00000487118 FAM189A1O60320 539 aa9.34□□□□□ -0.91
NUDCD3-209ENST00000487118 VTNP04004 478 aa9.34□□□□□ -0.91
NUDCD3-209ENST00000487118 C6orf222P0C671 652 aaPredicted RBP9.34□□□□□ -0.91
NUDCD3-209ENST00000487118 PRKAR2AP13861 404 aaKnown RBP9.34□□□□□ -0.91
NUDCD3-209ENST00000487118 ELNP15502 786 aa9.34□□□□□ -0.91
NUDCD3-209ENST00000487118 CCND3P30281 292 aaPredicted RBP9.34□□□□□ -0.91
NUDCD3-209ENST00000487118 NLRP11P59045 1033 aaKnown RBP9.34□□□□□ -0.91
NUDCD3-209ENST00000487118 MCL1Q07820 350 aa9.34□□□□□ -0.91
NUDCD3-209ENST00000487118 ARHGEF6Q15052 776 aa9.34□□□□□ -0.91
NUDCD3-209ENST00000487118 TSR1Q2NL82 804 aaKnown RBP9.34□□□□□ -0.91
NUDCD3-209ENST00000487118 EPC2Q52LR7 807 aa9.34□□□□□ -0.91
NUDCD3-209ENST00000487118 TRIM65Q6PJ69 517 aa9.34□□□□□ -0.91
NUDCD3-209ENST00000487118 CACNA2D4Q7Z3S7 1137 aa9.34□□□□□ -0.91
NUDCD3-209ENST00000487118 SRGAP1Q7Z6B7 1085 aa9.34□□□□□ -0.91
NUDCD3-209ENST00000487118 USP37Q86T82 979 aa9.34□□□□□ -0.91
NUDCD3-209ENST00000487118 KLHDC9Q8NEP7 349 aa9.34□□□□□ -0.91
NUDCD3-209ENST00000487118 LMO3Q8TAP4 145 aa9.34□□□□□ -0.91
NUDCD3-209ENST00000487118 ZNF333Q96JL9 665 aa9.34□□□□□ -0.91
NUDCD3-209ENST00000487118 PRIMPOLQ96LW4 560 aa9.34□□□□□ -0.91
NUDCD3-209ENST00000487118 FDXACB1Q9BRP7 624 aaPredicted RBP9.34□□□□□ -0.91
NUDCD3-209ENST00000487118 FAM213AQ9BRX8 229 aa9.34□□□□□ -0.91
NUDCD3-209ENST00000487118 MSTO1Q9BUK6 570 aa9.34□□□□□ -0.91
NUDCD3-209ENST00000487118 INO80BQ9C086 356 aaPredicted RBP9.34□□□□□ -0.91
NUDCD3-209ENST00000487118 INTS2Q9H0H0 1204 aaKnown RBP9.34□□□□□ -0.91
NUDCD3-209ENST00000487118 ADAMTS10Q9H324 1103 aa9.34□□□□□ -0.91
NUDCD3-209ENST00000487118 MINDY3Q9H8M7 445 aa9.34□□□□□ -0.91
NUDCD3-209ENST00000487118 TMEM8AQ9HCN3 771 aa9.34□□□□□ -0.91
NUDCD3-209ENST00000487118 GCNT4Q9P109 453 aa9.34□□□□□ -0.91
NUDCD3-209ENST00000487118 PLAGL2Q9UPG8 496 aa9.34□□□□□ -0.91
NUDCD3-209ENST00000487118 AKT3Q9Y243 479 aa9.34□□□□□ -0.91
NUDCD3-209ENST00000487118 TNFSF13BQ9Y275 285 aa9.34□□□□□ -0.91
NUDCD3-209ENST00000487118 COQ4Q9Y3A0 265 aa9.34□□□□□ -0.91
NUDCD3-209ENST00000487118 C17orf102A2RUQ5 167 aa9.33□□□□□ -0.92
NUDCD3-209ENST00000487118 LRRC53A6NM62 1247 aa9.33□□□□□ -0.92
NUDCD3-209ENST00000487118 USP27XA6NNY8 438 aa9.33□□□□□ -0.92
NUDCD3-209ENST00000487118 OGTO15294 1046 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms