RNA–Protein interactions for RNA: ENST00000487084.1

CDHR3-212, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 834 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-212ENST00000487084 XIRP2A4UGR9 3374 aa24.63■■□□□ 1.53
CDHR3-212ENST00000487084 PER2O15055 1255 aa24.63■■□□□ 1.53
CDHR3-212ENST00000487084 LINC01565O15544 149 aa24.63■■□□□ 1.53
CDHR3-212ENST00000487084 F13A1P00488 732 aa24.63■■□□□ 1.53
CDHR3-212ENST00000487084 BMP1P13497 986 aa24.63■■□□□ 1.53
CDHR3-212ENST00000487084 PDIA4P13667 645 aaKnown RBP24.63■■□□□ 1.53
CDHR3-212ENST00000487084 SMTNP53814 917 aa24.63■■□□□ 1.53
CDHR3-212ENST00000487084 PDE12Q6L8Q7 609 aaKnown RBP24.63■■□□□ 1.53
CDHR3-212ENST00000487084 IGSF21Q96ID5 467 aa24.63■■□□□ 1.53
CDHR3-212ENST00000487084 REEP2Q9BRK0 252 aa24.63■■□□□ 1.53
CDHR3-212ENST00000487084 TMEM134Q9H6X4 195 aa24.63■■□□□ 1.53
CDHR3-212ENST00000487084 MIOSQ9NXC5 875 aa24.63■■□□□ 1.53
CDHR3-212ENST00000487084 SNTG2Q9NY99 539 aa24.63■■□□□ 1.53
CDHR3-212ENST00000487084 VCANP13611 3396 aa24.63■■□□□ 1.53
CDHR3-212ENST00000487084 FAM13AO94988 1023 aa24.62■■□□□ 1.53
CDHR3-212ENST00000487084 OR1G1P47890 313 aa24.62■■□□□ 1.53
CDHR3-212ENST00000487084 NDUFV1P49821 464 aa24.62■■□□□ 1.53
CDHR3-212ENST00000487084 COL19A1Q14993 1142 aa24.62■■□□□ 1.53
CDHR3-212ENST00000487084 DCAF4L1Q3SXM0 396 aa24.62■■□□□ 1.53
CDHR3-212ENST00000487084 LEXMQ3ZCV2 418 aa24.62■■□□□ 1.53
CDHR3-212ENST00000487084 APBB1IPQ7Z5R6 666 aaPredicted RBP24.62■■□□□ 1.53
CDHR3-212ENST00000487084 BCL7CQ8WUZ0 217 aaPredicted RBP24.62■■□□□ 1.53
CDHR3-212ENST00000487084 SPIRE2Q8WWL2 714 aa24.62■■□□□ 1.53
CDHR3-212ENST00000487084 TMEM175Q9BSA9 504 aa24.62■■□□□ 1.53
CDHR3-212ENST00000487084 MRPL4Q9BYD3 311 aaKnown RBP24.62■■□□□ 1.53
CDHR3-212ENST00000487084 ZHX3Q9H4I2 956 aa24.62■■□□□ 1.53
CDHR3-212ENST00000487084 NGRNQ9NPE2 291 aaKnown RBP24.62■■□□□ 1.53
CDHR3-212ENST00000487084 FAN1Q9Y2M0 1017 aa24.62■■□□□ 1.53
CDHR3-212ENST00000487084 GDAQ9Y2T3 454 aa24.62■■□□□ 1.53
CDHR3-212ENST00000487084 PRG3Q9Y2Y8 225 aaPredicted RBP24.62■■□□□ 1.53
CDHR3-212ENST00000487084 INPPL1O15357 1258 aa24.61■■□□□ 1.53
CDHR3-212ENST00000487084 ALDH2P05091 517 aa24.61■■□□□ 1.53
CDHR3-212ENST00000487084 STRN3Q13033 797 aa24.61■■□□□ 1.53
CDHR3-212ENST00000487084 PKP1Q13835 747 aa24.61■■□□□ 1.53
CDHR3-212ENST00000487084 BMS1Q14692 1282 aaKnown RBP24.61■■□□□ 1.53
CDHR3-212ENST00000487084 CLUL1Q15846 466 aa24.61■■□□□ 1.53
CDHR3-212ENST00000487084 RRAGBQ5VZM2 374 aa24.61■■□□□ 1.53
CDHR3-212ENST00000487084 TAS1R3Q7RTX0 852 aa24.61■■□□□ 1.53
CDHR3-212ENST00000487084 VPS52Q8N1B4 723 aa24.61■■□□□ 1.53
CDHR3-212ENST00000487084 LINC00301Q8NCQ3 95 aa24.61■■□□□ 1.53
CDHR3-212ENST00000487084 UHRF1Q96T88 793 aaPredicted RBP24.61■■□□□ 1.53
CDHR3-212ENST00000487084 LARSQ9P2J5 1176 aaKnown RBP24.61■■□□□ 1.53
CDHR3-212ENST00000487084 KCNG1Q9UIX4 513 aa24.61■■□□□ 1.53
CDHR3-212ENST00000487084 ODF2LQ9ULJ1 636 aa24.61■■□□□ 1.53
CDHR3-212ENST00000487084 TNFSF13BQ9Y275 285 aa24.61■■□□□ 1.53
CDHR3-212ENST00000487084 HIDE1A8MVS5 230 aa24.6■■□□□ 1.53
CDHR3-212ENST00000487084 NRP1O14786 923 aa24.6■■□□□ 1.53
CDHR3-212ENST00000487084 SPTLC2O15270 562 aa24.6■■□□□ 1.53
CDHR3-212ENST00000487084 TBCAO75347 108 aaKnown RBP24.6■■□□□ 1.53
CDHR3-212ENST00000487084 RECQL4O94761 1208 aa24.6■■□□□ 1.53
CDHR3-212ENST00000487084 DDIT3P35638 169 aa24.6■■□□□ 1.53
CDHR3-212ENST00000487084 DLX2Q07687 328 aaPredicted RBP24.6■■□□□ 1.53
CDHR3-212ENST00000487084 SMC1AQ14683 1233 aaKnown RBP24.6■■□□□ 1.53
CDHR3-212ENST00000487084 CTC1Q2NKJ3 1217 aa24.6■■□□□ 1.53
CDHR3-212ENST00000487084 ZNF568Q3ZCX4 644 aa24.6■■□□□ 1.53
CDHR3-212ENST00000487084 COLGALT2Q8IYK4 626 aa24.6■■□□□ 1.53
CDHR3-212ENST00000487084 MYCT1Q8N699 235 aa24.6■■□□□ 1.53
CDHR3-212ENST00000487084 EFHBQ8N7U6 833 aa24.6■■□□□ 1.53
CDHR3-212ENST00000487084 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.6■■□□□ 1.53
CDHR3-212ENST00000487084 NECAB3Q96P71 396 aaPredicted RBP24.6■■□□□ 1.53
CDHR3-212ENST00000487084 ACO2Q99798 780 aaKnown RBP24.6■■□□□ 1.53
CDHR3-212ENST00000487084 TARS2Q9BW92 718 aaKnown RBP24.6■■□□□ 1.53
CDHR3-212ENST00000487084 DAXXQ9UER7 740 aaPredicted RBP24.6■■□□□ 1.53
CDHR3-212ENST00000487084 MORC2Q9Y6X9 1032 aaPredicted RBP24.6■■□□□ 1.53
CDHR3-212ENST00000487084 CUL9Q8IWT3 2517 aa24.6■■□□□ 1.53
CDHR3-212ENST00000487084 TBX10O75333 385 aa24.59■■□□□ 1.53
CDHR3-212ENST00000487084 NR1I2O75469 434 aa24.59■■□□□ 1.53
CDHR3-212ENST00000487084 LTBRP36941 435 aa24.59■■□□□ 1.53
CDHR3-212ENST00000487084 GRIK3Q13003 919 aa24.59■■□□□ 1.53
CDHR3-212ENST00000487084 ADAM15Q13444 863 aa24.59■■□□□ 1.53
CDHR3-212ENST00000487084 DUSP6Q16828 381 aa24.59■■□□□ 1.53
CDHR3-212ENST00000487084 PTCRAQ6ISU1 281 aaPredicted RBP24.59■■□□□ 1.53
CDHR3-212ENST00000487084 ZBTB33Q86T24 672 aa24.59■■□□□ 1.53
CDHR3-212ENST00000487084 DDX53Q86TM3 631 aaKnown RBP24.59■■□□□ 1.53
CDHR3-212ENST00000487084 TMEM161BQ8NDZ6 487 aa24.59■■□□□ 1.53
CDHR3-212ENST00000487084 NTPCRQ9BSD7 190 aaKnown RBP24.59■■□□□ 1.53
CDHR3-212ENST00000487084 TCHPQ9BT92 498 aa24.59■■□□□ 1.53
CDHR3-212ENST00000487084 PANK2Q9BZ23 570 aa24.59■■□□□ 1.53
CDHR3-212ENST00000487084 STK17AQ9UEE5 414 aa24.59■■□□□ 1.53
CDHR3-212ENST00000487084 MAPTP10636 758 aaKnown RBP24.58■■□□□ 1.53
CDHR3-212ENST00000487084 HARSP12081 509 aaKnown RBP24.58■■□□□ 1.53
CDHR3-212ENST00000487084 DSC1Q08554 894 aa24.58■■□□□ 1.53
CDHR3-212ENST00000487084 GIT2Q14161 759 aa24.58■■□□□ 1.53
CDHR3-212ENST00000487084 TMEM87AQ8NBN3 555 aa24.58■■□□□ 1.53
CDHR3-212ENST00000487084 GSTCDQ8NEC7 633 aa24.58■■□□□ 1.53
CDHR3-212ENST00000487084 AUTS2Q8WXX7 1259 aa24.58■■□□□ 1.53
CDHR3-212ENST00000487084 CDCA3Q99618 268 aaPredicted RBP24.58■■□□□ 1.53
CDHR3-212ENST00000487084 ZBP1Q9H171 429 aa24.58■■□□□ 1.53
CDHR3-212ENST00000487084 PARVGQ9HBI0 331 aa24.58■■□□□ 1.53
CDHR3-212ENST00000487084 TTC28Q96AY4 2481 aa24.57■■□□□ 1.52
CDHR3-212ENST00000487084 ZMYM2Q9UBW7 1377 aa24.57■■□□□ 1.52
CDHR3-212ENST00000487084 TCF20Q9UGU0 1960 aaKnown RBP24.57■■□□□ 1.52
CDHR3-212ENST00000487084 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP24.57■■□□□ 1.52
CDHR3-212ENST00000487084 H0YCG3 227 aa24.57■■□□□ 1.52
CDHR3-212ENST00000487084 K7ENM7 598 aa24.57■■□□□ 1.52
CDHR3-212ENST00000487084 YEATS4O95619 227 aa24.57■■□□□ 1.52
CDHR3-212ENST00000487084 CXCL14O95715 111 aa24.57■■□□□ 1.52
CDHR3-212ENST00000487084 STAT6P42226 847 aa24.57■■□□□ 1.52
CDHR3-212ENST00000487084 OSTNP61366 133 aa24.57■■□□□ 1.52
CDHR3-212ENST00000487084 LLGL2Q6P1M3 1020 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms