RNA–Protein interactions for RNA: ENST00000487068.1

NEK4-204, Transcript of NIMA related kinase 4, humanhuman

TSL 2

Gene NEK4, Length 631 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-204ENST00000487068 H0YCG3 227 aa11.23□□□□□ -0.61
NEK4-204ENST00000487068 ACKR2O00590 384 aa11.23□□□□□ -0.61
NEK4-204ENST00000487068 GRM6O15303 877 aa11.23□□□□□ -0.61
NEK4-204ENST00000487068 LPXNO60711 386 aa11.23□□□□□ -0.61
NEK4-204ENST00000487068 BRD1O95696 1058 aa11.23□□□□□ -0.61
NEK4-204ENST00000487068 POMCP01189 267 aa11.23□□□□□ -0.61
NEK4-204ENST00000487068 IDEP14735 1019 aa11.23□□□□□ -0.61
NEK4-204ENST00000487068 AKAP5P24588 427 aa11.23□□□□□ -0.61
NEK4-204ENST00000487068 PPM1AP35813 382 aa11.23□□□□□ -0.61
NEK4-204ENST00000487068 ANP32AP39687 249 aaKnown RBP11.23□□□□□ -0.61
NEK4-204ENST00000487068 ALDH7A1P49419 539 aaKnown RBP11.23□□□□□ -0.61
NEK4-204ENST00000487068 MAPK7Q13164 816 aa11.23□□□□□ -0.61
NEK4-204ENST00000487068 FAM187BQ17R55 369 aa11.23□□□□□ -0.61
NEK4-204ENST00000487068 CSPP1Q1MSJ5 1256 aa11.23□□□□□ -0.61
NEK4-204ENST00000487068 ATF7IP2Q5U623 682 aa11.23□□□□□ -0.61
NEK4-204ENST00000487068 KCNT2Q6UVM3 1135 aa11.23□□□□□ -0.61
NEK4-204ENST00000487068 SV2BQ7L1I2 683 aa11.23□□□□□ -0.61
NEK4-204ENST00000487068 LRRC15Q8TF66 581 aa11.23□□□□□ -0.61
NEK4-204ENST00000487068 RSPH1Q8WYR4 309 aa11.23□□□□□ -0.61
NEK4-204ENST00000487068 P2RX5Q93086 422 aa11.23□□□□□ -0.61
NEK4-204ENST00000487068 DHX58Q96C10 678 aa11.23□□□□□ -0.61
NEK4-204ENST00000487068 TCHPQ9BT92 498 aa11.23□□□□□ -0.61
NEK4-204ENST00000487068 MRPL4Q9BYD3 311 aaKnown RBP11.23□□□□□ -0.61
NEK4-204ENST00000487068 FZD8Q9H461 694 aa11.23□□□□□ -0.61
NEK4-204ENST00000487068 PDZD7Q9H5P4 517 aa11.23□□□□□ -0.61
NEK4-204ENST00000487068 CWH43Q9H720 699 aa11.23□□□□□ -0.61
NEK4-204ENST00000487068 PARVGQ9HBI0 331 aa11.23□□□□□ -0.61
NEK4-204ENST00000487068 UBN1Q9NPG3 1134 aa11.23□□□□□ -0.61
NEK4-204ENST00000487068 TBC1D13Q9NVG8 400 aa11.23□□□□□ -0.61
NEK4-204ENST00000487068 LMCD1Q9NZU5 365 aa11.23□□□□□ -0.61
NEK4-204ENST00000487068 KCNG1Q9UIX4 513 aa11.23□□□□□ -0.61
NEK4-204ENST00000487068 RBM19Q9Y4C8 960 aaKnown RBP11.23□□□□□ -0.61
NEK4-204ENST00000487068 XIRP2A4UGR9 3374 aa11.23□□□□□ -0.61
NEK4-204ENST00000487068 REV3LO60673 3130 aa11.22□□□□□ -0.61
NEK4-204ENST00000487068 A0A1B0GUA9 196 aa11.22□□□□□ -0.61
NEK4-204ENST00000487068 TTLL13PA6NNM8 815 aa11.22□□□□□ -0.61
NEK4-204ENST00000487068 NT5C1B-RDH14C9J2C7 533 aa11.22□□□□□ -0.61
NEK4-204ENST00000487068 ZNF623O75123 536 aa11.22□□□□□ -0.61
NEK4-204ENST00000487068 FGF18O76093 207 aa11.22□□□□□ -0.61
NEK4-204ENST00000487068 ITGB1P05556 798 aa11.22□□□□□ -0.61
NEK4-204ENST00000487068 LINC00271P0C7V0 271 aa11.22□□□□□ -0.61
NEK4-204ENST00000487068 DDIT3P35638 169 aa11.22□□□□□ -0.61
NEK4-204ENST00000487068 PLXNA3P51805 1871 aa11.22□□□□□ -0.61
NEK4-204ENST00000487068 BCAR1P56945 870 aa11.22□□□□□ -0.61
NEK4-204ENST00000487068 DCAF4L1Q3SXM0 396 aa11.22□□□□□ -0.61
NEK4-204ENST00000487068 NAALADL2Q58DX5 795 aa11.22□□□□□ -0.61
NEK4-204ENST00000487068 AGMOQ6ZNB7 445 aa11.22□□□□□ -0.61
NEK4-204ENST00000487068 ZBTB33Q86T24 672 aa11.22□□□□□ -0.61
NEK4-204ENST00000487068 FAM178BQ8IXR5 827 aa11.22□□□□□ -0.61
NEK4-204ENST00000487068 SMG8Q8ND04 991 aaKnown RBP11.22□□□□□ -0.61
NEK4-204ENST00000487068 MICAL1Q8TDZ2 1067 aa11.22□□□□□ -0.61
NEK4-204ENST00000487068 POF1BQ8WVV4 589 aa11.22□□□□□ -0.61
NEK4-204ENST00000487068 HLA-CQ95604 372 aa11.22□□□□□ -0.61
NEK4-204ENST00000487068 PPP2R3CQ969Q6 453 aa11.22□□□□□ -0.61
NEK4-204ENST00000487068 TMEM169Q96HH4 297 aa11.22□□□□□ -0.61
NEK4-204ENST00000487068 ZFP42Q96MM3 310 aa11.22□□□□□ -0.61
NEK4-204ENST00000487068 GAD1Q99259 594 aa11.22□□□□□ -0.61
NEK4-204ENST00000487068 LMAN2LQ9H0V9 348 aa11.22□□□□□ -0.61
NEK4-204ENST00000487068 NSUN3Q9H649 340 aaKnown RBP11.22□□□□□ -0.61
NEK4-204ENST00000487068 ENTPD7Q9NQZ7 604 aa11.22□□□□□ -0.61
NEK4-204ENST00000487068 TLR9Q9NR96 1032 aa11.22□□□□□ -0.61
NEK4-204ENST00000487068 KLK14Q9P0G3 267 aa11.22□□□□□ -0.61
NEK4-204ENST00000487068 ARHGAP28Q9P2N2 729 aa11.22□□□□□ -0.61
NEK4-204ENST00000487068 PUF60Q9UHX1 559 aaKnown RBP11.22□□□□□ -0.61
NEK4-204ENST00000487068 PLAGL2Q9UPG8 496 aa11.22□□□□□ -0.61
NEK4-204ENST00000487068 GDAQ9Y2T3 454 aa11.22□□□□□ -0.61
NEK4-204ENST00000487068 MORC2Q9Y6X9 1032 aaPredicted RBP11.22□□□□□ -0.61
NEK4-204ENST00000487068 VWA8A3KMH1 1905 aa11.21□□□□□ -0.61
NEK4-204ENST00000487068 MTCL1Q9Y4B5 1905 aaKnown RBP11.21□□□□□ -0.61
NEK4-204ENST00000487068 A0A087X0B3 334 aa11.21□□□□□ -0.61
NEK4-204ENST00000487068 ARL5CA6NH57 179 aa11.21□□□□□ -0.61
NEK4-204ENST00000487068 HNRNPDLO14979 420 aaKnown RBP11.21□□□□□ -0.61
NEK4-204ENST00000487068 OFD1O75665 1012 aa11.21□□□□□ -0.61
NEK4-204ENST00000487068 EDN1P05305 212 aa11.21□□□□□ -0.61
NEK4-204ENST00000487068 PYGBP11216 843 aa11.21□□□□□ -0.61
NEK4-204ENST00000487068 OR1G1P47890 313 aa11.21□□□□□ -0.61
NEK4-204ENST00000487068 LIG4P49917 911 aa11.21□□□□□ -0.61
NEK4-204ENST00000487068 SCNN1GP51170 649 aa11.21□□□□□ -0.61
NEK4-204ENST00000487068 OSTNP61366 133 aa11.21□□□□□ -0.61
NEK4-204ENST00000487068 KRT17Q04695 432 aa11.21□□□□□ -0.61
NEK4-204ENST00000487068 GIT2Q14161 759 aa11.21□□□□□ -0.61
NEK4-204ENST00000487068 ARSHQ5FYA8 562 aa11.21□□□□□ -0.61
NEK4-204ENST00000487068 PLPP4Q5VZY2 271 aa11.21□□□□□ -0.61
NEK4-204ENST00000487068 EEF1DP3Q658K8 133 aa11.21□□□□□ -0.61
NEK4-204ENST00000487068 LRRC55Q6ZSA7 311 aa11.21□□□□□ -0.61
NEK4-204ENST00000487068 MRPL10Q7Z7H8 261 aaKnown RBP11.21□□□□□ -0.61
NEK4-204ENST00000487068 SPIRE2Q8WWL2 714 aa11.21□□□□□ -0.61
NEK4-204ENST00000487068 DDX12PQ92771 950 aa11.21□□□□□ -0.61
NEK4-204ENST00000487068 TARS2Q9BW92 718 aaKnown RBP11.21□□□□□ -0.61
NEK4-204ENST00000487068 TMEM134Q9H6X4 195 aa11.21□□□□□ -0.61
NEK4-204ENST00000487068 SNTG2Q9NY99 539 aa11.21□□□□□ -0.61
NEK4-204ENST00000487068 SPG21Q9NZD8 308 aa11.21□□□□□ -0.61
NEK4-204ENST00000487068 KANSL3Q9P2N6 904 aa11.21□□□□□ -0.61
NEK4-204ENST00000487068 DNAJB4Q9UDY4 337 aa11.21□□□□□ -0.61
NEK4-204ENST00000487068 PCDHA7Q9UN72 937 aa11.21□□□□□ -0.61
NEK4-204ENST00000487068 BDP1A6H8Y1 2624 aa11.21□□□□□ -0.62
NEK4-204ENST00000487068 CARNS1A5YM72 827 aa11.2□□□□□ -0.62
NEK4-204ENST00000487068 TRAK2O60296 914 aa11.2□□□□□ -0.62
NEK4-204ENST00000487068 GPR37L1O60883 481 aa11.2□□□□□ -0.62
NEK4-204ENST00000487068 NR1I2O75469 434 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms