RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 C14orf119Q9NWQ9 140 aa4.75□□□□□ -1.65
SNRNP27-204ENST00000487029 USP36Q9P275 1121 aaKnown RBP4.75□□□□□ -1.65
SNRNP27-204ENST00000487029 COX11Q9Y6N1 276 aa4.75□□□□□ -1.65
SNRNP27-204ENST00000487029 ARHGEF17Q96PE2 2063 aaPredicted RBP4.74□□□□□ -1.65
SNRNP27-204ENST00000487029 A0A0A6YYK5 440 aaPredicted RBP4.74□□□□□ -1.65
SNRNP27-204ENST00000487029 CENPVL1A0A0U1RR11 272 aa4.74□□□□□ -1.65
SNRNP27-204ENST00000487029 KDM1AO60341 852 aa4.74□□□□□ -1.65
SNRNP27-204ENST00000487029 TOX4O94842 621 aa4.74□□□□□ -1.65
SNRNP27-204ENST00000487029 PARNO95453 639 aaKnown RBP4.74□□□□□ -1.65
SNRNP27-204ENST00000487029 RGS3P49796 1198 aa4.74□□□□□ -1.65
SNRNP27-204ENST00000487029 SESN2P58004 480 aaPredicted RBP4.74□□□□□ -1.65
SNRNP27-204ENST00000487029 ALDH6A1Q02252 535 aaKnown RBP4.74□□□□□ -1.65
SNRNP27-204ENST00000487029 MCL1Q07820 350 aa4.74□□□□□ -1.65
SNRNP27-204ENST00000487029 MAP3K12Q12852 859 aa4.74□□□□□ -1.65
SNRNP27-204ENST00000487029 ABCB5Q2M3G0 1257 aa4.74□□□□□ -1.65
SNRNP27-204ENST00000487029 INAVAQ3KP66 663 aa4.74□□□□□ -1.65
SNRNP27-204ENST00000487029 GAGE13Q4V321 117 aa4.74□□□□□ -1.65
SNRNP27-204ENST00000487029 Q6YL49 198 aa4.74□□□□□ -1.65
SNRNP27-204ENST00000487029 RD3Q7Z3Z2 195 aa4.74□□□□□ -1.65
SNRNP27-204ENST00000487029 CLEC14AQ86T13 490 aa4.74□□□□□ -1.65
SNRNP27-204ENST00000487029 RTF1Q92541 710 aaKnown RBP4.74□□□□□ -1.65
SNRNP27-204ENST00000487029 E2F7Q96AV8 911 aa4.74□□□□□ -1.65
SNRNP27-204ENST00000487029 CHMP4CQ96CF2 233 aa4.74□□□□□ -1.65
SNRNP27-204ENST00000487029 MS4A5Q9H3V2 200 aa4.74□□□□□ -1.65
SNRNP27-204ENST00000487029 TCEAL9Q9UHQ7 104 aa4.74□□□□□ -1.65
SNRNP27-204ENST00000487029 MSRAQ9UJ68 235 aa4.74□□□□□ -1.65
SNRNP27-204ENST00000487029 EID1Q9Y6B2 187 aa4.74□□□□□ -1.65
SNRNP27-204ENST00000487029 SETD1BQ9UPS6 1966 aaKnown RBP4.74□□□□□ -1.65
SNRNP27-204ENST00000487029 TNKSO95271 1327 aa4.73□□□□□ -1.65
SNRNP27-204ENST00000487029 UBA6A0AVT1 1052 aaPredicted RBP4.73□□□□□ -1.65
SNRNP27-204ENST00000487029 SHTN1A0MZ66 631 aa4.73□□□□□ -1.65
SNRNP27-204ENST00000487029 MFAP3LO75121 409 aa4.73□□□□□ -1.65
SNRNP27-204ENST00000487029 VSIG10L2P0DP72 767 aa4.73□□□□□ -1.65
SNRNP27-204ENST00000487029 MYBL2P10244 700 aa4.73□□□□□ -1.65
SNRNP27-204ENST00000487029 ITGB6P18564 788 aa4.73□□□□□ -1.65
SNRNP27-204ENST00000487029 HK1P19367 917 aa4.73□□□□□ -1.65
SNRNP27-204ENST00000487029 ZEB1P37275 1124 aaPredicted RBP4.73□□□□□ -1.65
SNRNP27-204ENST00000487029 IARSP41252 1262 aaKnown RBP4.73□□□□□ -1.65
SNRNP27-204ENST00000487029 PTH2RP49190 550 aa4.73□□□□□ -1.65
SNRNP27-204ENST00000487029 FAM189BP81408 668 aa4.73□□□□□ -1.65
SNRNP27-204ENST00000487029 TTC38Q5R3I4 469 aa4.73□□□□□ -1.65
SNRNP27-204ENST00000487029 ZBTB46Q86UZ6 589 aa4.73□□□□□ -1.65
SNRNP27-204ENST00000487029 PHYKPLQ8IUZ5 450 aa4.73□□□□□ -1.65
SNRNP27-204ENST00000487029 C7orf31Q8N865 590 aa4.73□□□□□ -1.65
SNRNP27-204ENST00000487029 PLA2G15Q8NCC3 412 aa4.73□□□□□ -1.65
SNRNP27-204ENST00000487029 OR5AN1Q8NGI8 311 aa4.73□□□□□ -1.65
SNRNP27-204ENST00000487029 ZNF496Q96IT1 587 aaPredicted RBP4.73□□□□□ -1.65
SNRNP27-204ENST00000487029 RCAN3Q9UKA8 241 aa4.73□□□□□ -1.65
SNRNP27-204ENST00000487029 E2F8A0AVK6 867 aa4.72□□□□□ -1.65
SNRNP27-204ENST00000487029 LCHNA4D1U4 455 aa4.72□□□□□ -1.65
SNRNP27-204ENST00000487029 GOLGA8AA7E2F4 631 aa4.72□□□□□ -1.65
SNRNP27-204ENST00000487029 AHRRA9YTQ3 701 aa4.72□□□□□ -1.65
SNRNP27-204ENST00000487029 ZNF185O15231 689 aa4.72□□□□□ -1.65
SNRNP27-204ENST00000487029 SCAF4O95104 1147 aaKnown RBP4.72□□□□□ -1.65
SNRNP27-204ENST00000487029 CFBP00751 764 aa4.72□□□□□ -1.65
SNRNP27-204ENST00000487029 SCAND1P57086 179 aa4.72□□□□□ -1.65
SNRNP27-204ENST00000487029 PDCD1Q15116 288 aa4.72□□□□□ -1.65
SNRNP27-204ENST00000487029 PTPN21Q16825 1174 aa4.72□□□□□ -1.65
SNRNP27-204ENST00000487029 TIGD2Q4W5G0 525 aa4.72□□□□□ -1.65
SNRNP27-204ENST00000487029 TIGD7Q6NT04 549 aaPredicted RBP4.72□□□□□ -1.65
SNRNP27-204ENST00000487029 ESPNLQ6ZVH7 1005 aa4.72□□□□□ -1.65
SNRNP27-204ENST00000487029 RAVER1Q8IY67 606 aaKnown RBP4.72□□□□□ -1.65
SNRNP27-204ENST00000487029 LMBR1Q8WVP7 490 aa4.72□□□□□ -1.65
SNRNP27-204ENST00000487029 ST8SIA2Q92186 375 aa4.72□□□□□ -1.65
SNRNP27-204ENST00000487029 FUBP3Q96I24 572 aaKnown RBP eCLIP4.72□□□□□ -1.65
SNRNP27-204ENST00000487029 ACAP3Q96P50 834 aa4.72□□□□□ -1.65
SNRNP27-204ENST00000487029 TUBGCP5Q96RT8 1024 aa4.72□□□□□ -1.65
SNRNP27-204ENST00000487029 FOXB1Q99853 325 aa4.72□□□□□ -1.65
SNRNP27-204ENST00000487029 SLC13A1Q9BZW2 595 aa4.72□□□□□ -1.65
SNRNP27-204ENST00000487029 AASDHPPTQ9NRN7 309 aa4.72□□□□□ -1.65
SNRNP27-204ENST00000487029 CHPF2Q9P2E5 772 aa4.72□□□□□ -1.65
SNRNP27-204ENST00000487029 ANKFY1Q9P2R3 1169 aa4.72□□□□□ -1.65
SNRNP27-204ENST00000487029 NCDNQ9UBB6 729 aa4.72□□□□□ -1.65
SNRNP27-204ENST00000487029 KCNG1Q9UIX4 513 aa4.72□□□□□ -1.65
SNRNP27-204ENST00000487029 MT-CO1P00395 513 aa4.71□□□□□ -1.66
SNRNP27-204ENST00000487029 PRLP01236 227 aa4.71□□□□□ -1.66
SNRNP27-204ENST00000487029 RBP3P10745 1247 aa4.71□□□□□ -1.66
SNRNP27-204ENST00000487029 HNRNPLP14866 589 aaKnown RBP eCLIP4.71□□□□□ -1.66
SNRNP27-204ENST00000487029 RAB27AP51159 221 aa4.71□□□□□ -1.66
SNRNP27-204ENST00000487029 KRT85P78386 507 aa4.71□□□□□ -1.66
SNRNP27-204ENST00000487029 ROM1Q03395 351 aa4.71□□□□□ -1.66
SNRNP27-204ENST00000487029 PIN1Q13526 163 aaPredicted RBP4.71□□□□□ -1.66
SNRNP27-204ENST00000487029 NFE2Q16621 373 aaPredicted RBP4.71□□□□□ -1.66
SNRNP27-204ENST00000487029 FAM214AQ32MH5 1076 aa4.71□□□□□ -1.66
SNRNP27-204ENST00000487029 LCE1AQ5T7P2 110 aa4.71□□□□□ -1.66
SNRNP27-204ENST00000487029 MFSD5Q6N075 450 aa4.71□□□□□ -1.66
SNRNP27-204ENST00000487029 FBXO42Q6P3S6 717 aa4.71□□□□□ -1.66
SNRNP27-204ENST00000487029 FMNL3Q8IVF7 1028 aa4.71□□□□□ -1.66
SNRNP27-204ENST00000487029 CMIPQ8IY22 773 aa4.71□□□□□ -1.66
SNRNP27-204ENST00000487029 C1orf162Q8NEQ5 155 aaPredicted RBP4.71□□□□□ -1.66
SNRNP27-204ENST00000487029 HOOK2Q96ED9 719 aa4.71□□□□□ -1.66
SNRNP27-204ENST00000487029 MAML3Q96JK9 1138 aa4.71□□□□□ -1.66
SNRNP27-204ENST00000487029 POFUT1Q9H488 388 aa4.71□□□□□ -1.66
SNRNP27-204ENST00000487029 SERHL2Q9H4I8 314 aa4.71□□□□□ -1.66
SNRNP27-204ENST00000487029 CYP4F11Q9HBI6 524 aa4.71□□□□□ -1.66
SNRNP27-204ENST00000487029 SPATA31A6Q5VVP1 1343 aa4.71□□□□□ -1.66
SNRNP27-204ENST00000487029 TRIM75PA6NK02 468 aa4.7□□□□□ -1.66
SNRNP27-204ENST00000487029 FZD9O00144 591 aa4.7□□□□□ -1.66
SNRNP27-204ENST00000487029 AKAP10O43572 662 aa4.7□□□□□ -1.66
SNRNP27-204ENST00000487029 IPO13O94829 963 aaKnown RBP4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms