RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 ZCRB1Q8TBF4 217 aaKnown RBP5.48□□□□□ -1.53
SNRNP40-205ENST00000486941 NEU4Q8WWR8 484 aaPredicted RBP5.48□□□□□ -1.53
SNRNP40-205ENST00000486941 LTV1Q96GA3 475 aaPredicted RBP5.48□□□□□ -1.53
SNRNP40-205ENST00000486941 TESK2Q96S53 571 aa5.48□□□□□ -1.53
SNRNP40-205ENST00000486941 CELF4Q9BZC1 486 aaKnown RBP5.48□□□□□ -1.53
SNRNP40-205ENST00000486941 KCNH7Q9NS40 1196 aa5.48□□□□□ -1.53
SNRNP40-205ENST00000486941 TFCP2L1Q9NZI6 479 aa5.48□□□□□ -1.53
SNRNP40-205ENST00000486941 NDOR1Q9UHB4 597 aa5.48□□□□□ -1.53
SNRNP40-205ENST00000486941 CTDP1Q9Y5B0 961 aaPredicted RBP5.48□□□□□ -1.53
SNRNP40-205ENST00000486941 SHANK3Q9BYB0 1731 aa5.48□□□□□ -1.53
SNRNP40-205ENST00000486941 CGNL1Q0VF96 1302 aa5.48□□□□□ -1.53
SNRNP40-205ENST00000486941 MAP3K19Q56UN5 1328 aa5.48□□□□□ -1.53
SNRNP40-205ENST00000486941 PNPLA7Q6ZV29 1317 aa5.48□□□□□ -1.53
SNRNP40-205ENST00000486941 UTRNP46939 3433 aa5.47□□□□□ -1.53
SNRNP40-205ENST00000486941 TONSLQ96HA7 1378 aa5.47□□□□□ -1.53
SNRNP40-205ENST00000486941 ST20-MTHFSA0A0A6YYL1 179 aa5.47□□□□□ -1.53
SNRNP40-205ENST00000486941 KRTAP23-1A1A580 65 aa5.47□□□□□ -1.53
SNRNP40-205ENST00000486941 C2orf78A6NCI8 922 aa5.47□□□□□ -1.53
SNRNP40-205ENST00000486941 DVL2O14641 736 aa5.47□□□□□ -1.53
SNRNP40-205ENST00000486941 FOXP2O15409 715 aa5.47□□□□□ -1.53
SNRNP40-205ENST00000486941 SLC26A4O43511 780 aa5.47□□□□□ -1.53
SNRNP40-205ENST00000486941 C1QTNF8P60827 252 aa5.47□□□□□ -1.53
SNRNP40-205ENST00000486941 RIN1Q13671 783 aa5.47□□□□□ -1.53
SNRNP40-205ENST00000486941 NAALADL2Q58DX5 795 aa5.47□□□□□ -1.53
SNRNP40-205ENST00000486941 TRIM61Q5EBN2 209 aa5.47□□□□□ -1.53
SNRNP40-205ENST00000486941 FAM47CQ5HY64 1035 aa5.47□□□□□ -1.53
SNRNP40-205ENST00000486941 RTKN2Q8IZC4 609 aa5.47□□□□□ -1.53
SNRNP40-205ENST00000486941 SHCBP1Q8NEM2 672 aa5.47□□□□□ -1.53
SNRNP40-205ENST00000486941 SLC2A4RGQ9NR83 387 aa5.47□□□□□ -1.53
SNRNP40-205ENST00000486941 CCNL1Q9UK58 526 aaPredicted RBP5.47□□□□□ -1.53
SNRNP40-205ENST00000486941 DOT1LQ8TEK3 1739 aa5.47□□□□□ -1.53
SNRNP40-205ENST00000486941 RTL1A6NKG5 1358 aa5.46□□□□□ -1.54
SNRNP40-205ENST00000486941 NSD2O96028 1365 aa5.46□□□□□ -1.54
SNRNP40-205ENST00000486941 TCRBV16S1A1N1A0A5B0 115 aa5.46□□□□□ -1.54
SNRNP40-205ENST00000486941 PMS2P1A4D2B8 440 aa5.46□□□□□ -1.54
SNRNP40-205ENST00000486941 FYB1O15117 783 aa5.46□□□□□ -1.54
SNRNP40-205ENST00000486941 MCM7P33993 719 aa5.46□□□□□ -1.54
SNRNP40-205ENST00000486941 RBM25P49756 843 aaKnown RBP5.46□□□□□ -1.54
SNRNP40-205ENST00000486941 SCNN1GP51170 649 aa5.46□□□□□ -1.54
SNRNP40-205ENST00000486941 ADCY7P51828 1080 aa5.46□□□□□ -1.54
SNRNP40-205ENST00000486941 ATP2C1P98194 919 aaPredicted RBP5.46□□□□□ -1.54
SNRNP40-205ENST00000486941 TUBA3CQ13748 450 aa5.46□□□□□ -1.54
SNRNP40-205ENST00000486941 RRP1BQ14684 758 aaKnown RBP5.46□□□□□ -1.54
SNRNP40-205ENST00000486941 LONRF2Q1L5Z9 754 aa5.46□□□□□ -1.54
SNRNP40-205ENST00000486941 NBPF6Q5VWK0 638 aa5.46□□□□□ -1.54
SNRNP40-205ENST00000486941 TUBA3EQ6PEY2 450 aa5.46□□□□□ -1.54
SNRNP40-205ENST00000486941 SGMS1Q86VZ5 419 aa5.46□□□□□ -1.54
SNRNP40-205ENST00000486941 TMPRSS6Q8IU80 811 aa5.46□□□□□ -1.54
SNRNP40-205ENST00000486941 D2HGDHQ8N465 521 aa5.46□□□□□ -1.54
SNRNP40-205ENST00000486941 JMYQ8N9B5 988 aa5.46□□□□□ -1.54
SNRNP40-205ENST00000486941 NBPF4Q96M43 638 aa5.46□□□□□ -1.54
SNRNP40-205ENST00000486941 GPHA2Q96T91 129 aa5.46□□□□□ -1.54
SNRNP40-205ENST00000486941 NELFAQ9H3P2 528 aa5.46□□□□□ -1.54
SNRNP40-205ENST00000486941 ASB1Q9Y576 335 aa5.46□□□□□ -1.54
SNRNP40-205ENST00000486941 TAF1LQ8IZX4 1826 aa5.46□□□□□ -1.54
SNRNP40-205ENST00000486941 KIF24Q5T7B8 1368 aa5.45□□□□□ -1.54
SNRNP40-205ENST00000486941 USP47Q96K76 1375 aa5.45□□□□□ -1.54
SNRNP40-205ENST00000486941 MEGF6O75095 1541 aa5.45□□□□□ -1.54
SNRNP40-205ENST00000486941 GSTA4O15217 222 aa5.45□□□□□ -1.54
SNRNP40-205ENST00000486941 MAFO75444 373 aaPredicted RBP5.45□□□□□ -1.54
SNRNP40-205ENST00000486941 MEOX1P50221 254 aa5.45□□□□□ -1.54
SNRNP40-205ENST00000486941 COL10A1Q03692 680 aa5.45□□□□□ -1.54
SNRNP40-205ENST00000486941 TMEM132BQ14DG7 1078 aa5.45□□□□□ -1.54
SNRNP40-205ENST00000486941 RRS1Q15050 365 aaKnown RBP5.45□□□□□ -1.54
SNRNP40-205ENST00000486941 Q6ZRM9 215 aa5.45□□□□□ -1.54
SNRNP40-205ENST00000486941 EP400NLQ6ZTU2 488 aa5.45□□□□□ -1.54
SNRNP40-205ENST00000486941 ADGRE4PQ86SQ3 457 aa5.45□□□□□ -1.54
SNRNP40-205ENST00000486941 COL23A1Q86Y22 540 aaPredicted RBP5.45□□□□□ -1.54
SNRNP40-205ENST00000486941 HIPK4Q8NE63 616 aa5.45□□□□□ -1.54
SNRNP40-205ENST00000486941 RAPGEF4Q8WZA2 1011 aa5.45□□□□□ -1.54
SNRNP40-205ENST00000486941 AGAP2Q99490 1192 aa5.45□□□□□ -1.54
SNRNP40-205ENST00000486941 TRIM39Q9HCM9 518 aa5.45□□□□□ -1.54
SNRNP40-205ENST00000486941 SIRPGQ9P1W8 387 aa5.45□□□□□ -1.54
SNRNP40-205ENST00000486941 FAM184BQ9ULE4 1060 aa5.45□□□□□ -1.54
SNRNP40-205ENST00000486941 ITGB4P16144 1822 aa5.45□□□□□ -1.54
SNRNP40-205ENST00000486941 INSRP06213 1382 aa5.44□□□□□ -1.54
SNRNP40-205ENST00000486941 C5P01031 1676 aa5.44□□□□□ -1.54
SNRNP40-205ENST00000486941 MECP2P51608 486 aaKnown RBP5.44□□□□□ -1.54
SNRNP40-205ENST00000486941 TMF1P82094 1093 aa5.44□□□□□ -1.54
SNRNP40-205ENST00000486941 ALDH6A1Q02252 535 aaKnown RBP5.44□□□□□ -1.54
SNRNP40-205ENST00000486941 SMN1Q16637 294 aaKnown RBP5.44□□□□□ -1.54
SNRNP40-205ENST00000486941 HSP90AB2PQ58FF8 381 aa5.44□□□□□ -1.54
SNRNP40-205ENST00000486941 BRAPQ7Z569 592 aa5.44□□□□□ -1.54
SNRNP40-205ENST00000486941 SMG6Q86US8 1419 aaKnown RBP5.44□□□□□ -1.54
SNRNP40-205ENST00000486941 IGSF22Q8N9C0 903 aa5.44□□□□□ -1.54
SNRNP40-205ENST00000486941 ERCC4Q92889 916 aaPredicted RBP5.44□□□□□ -1.54
SNRNP40-205ENST00000486941 DNAJC7Q99615 494 aa5.44□□□□□ -1.54
SNRNP40-205ENST00000486941 MSL2Q9HCI7 577 aa5.44□□□□□ -1.54
SNRNP40-205ENST00000486941 SNTG2Q9NY99 539 aa5.44□□□□□ -1.54
SNRNP40-205ENST00000486941 GPRC5BQ9NZH0 403 aa5.44□□□□□ -1.54
SNRNP40-205ENST00000486941 CD2APQ9Y5K6 639 aa5.44□□□□□ -1.54
SNRNP40-205ENST00000486941 PCDH11XQ9BZA7 1347 aa5.44□□□□□ -1.54
SNRNP40-205ENST00000486941 PCDH11YQ9BZA8 1340 aa5.44□□□□□ -1.54
SNRNP40-205ENST00000486941 WDR33Q9C0J8 1336 aaKnown RBP5.44□□□□□ -1.54
SNRNP40-205ENST00000486941 MAP2P11137 1827 aaKnown RBP5.44□□□□□ -1.54
SNRNP40-205ENST00000486941 KIF20BQ96Q89 1820 aa5.44□□□□□ -1.54
SNRNP40-205ENST00000486941 FLT4P35916 1363 aa5.43□□□□□ -1.54
SNRNP40-205ENST00000486941 SLC12A8A0AV02 714 aa5.43□□□□□ -1.54
SNRNP40-205ENST00000486941 CAPN14A8MX76 684 aa5.43□□□□□ -1.54
SNRNP40-205ENST00000486941 CYP27B1O15528 508 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms