RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 COL1A2P08123 1366 aa12.93□□□□□ -0.34
PKP4-213ENST00000486254 ANKRD62A6NC57 917 aa12.93□□□□□ -0.34
PKP4-213ENST00000486254 ZBTB42B2RXF5 422 aa12.93□□□□□ -0.34
PKP4-213ENST00000486254 FOXN3O00409 490 aaPredicted RBP12.93□□□□□ -0.34
PKP4-213ENST00000486254 ASAP2O43150 1006 aa12.93□□□□□ -0.34
PKP4-213ENST00000486254 PEX10O60683 326 aa12.93□□□□□ -0.34
PKP4-213ENST00000486254 PALMO75781 387 aa12.93□□□□□ -0.34
PKP4-213ENST00000486254 PGK2P07205 417 aa12.93□□□□□ -0.34
PKP4-213ENST00000486254 SOX10P56693 466 aa12.93□□□□□ -0.34
PKP4-213ENST00000486254 POU5F1Q01860 360 aaKnown RBP12.93□□□□□ -0.34
PKP4-213ENST00000486254 LAMC2Q13753 1193 aa12.93□□□□□ -0.34
PKP4-213ENST00000486254 CAPSQ13938 189 aa12.93□□□□□ -0.34
PKP4-213ENST00000486254 LY6KQ17RY6 165 aa12.93□□□□□ -0.34
PKP4-213ENST00000486254 ZACNQ401N2 412 aa12.93□□□□□ -0.34
PKP4-213ENST00000486254 CCDC70Q6NSX1 233 aa12.93□□□□□ -0.34
PKP4-213ENST00000486254 CC2D1AQ6P1N0 951 aaPredicted RBP12.93□□□□□ -0.34
PKP4-213ENST00000486254 SV2AQ7L0J3 742 aa12.93□□□□□ -0.34
PKP4-213ENST00000486254 DHX37Q8IY37 1157 aaKnown RBP12.93□□□□□ -0.34
PKP4-213ENST00000486254 HELQQ8TDG4 1101 aa12.93□□□□□ -0.34
PKP4-213ENST00000486254 TMEM143Q96AN5 459 aa12.93□□□□□ -0.34
PKP4-213ENST00000486254 SAAL1Q96ER3 474 aa12.93□□□□□ -0.34
PKP4-213ENST00000486254 MMS19Q96T76 1030 aa12.93□□□□□ -0.34
PKP4-213ENST00000486254 PARK7Q99497 189 aaKnown RBP12.93□□□□□ -0.34
PKP4-213ENST00000486254 PACSIN1Q9BY11 444 aa12.93□□□□□ -0.34
PKP4-213ENST00000486254 ISCUQ9H1K1 167 aa12.93□□□□□ -0.34
PKP4-213ENST00000486254 ZCCHC17Q9NP64 241 aaKnown RBP12.93□□□□□ -0.34
PKP4-213ENST00000486254 UBE2TQ9NPD8 197 aaPredicted RBP12.93□□□□□ -0.34
PKP4-213ENST00000486254 ZNF446Q9NWS9 450 aa12.93□□□□□ -0.34
PKP4-213ENST00000486254 RAB20Q9NX57 234 aa12.93□□□□□ -0.34
PKP4-213ENST00000486254 GOLGA8IPA6NC78 632 aa12.92□□□□□ -0.34
PKP4-213ENST00000486254 LRRIQ4A6NIV6 560 aa12.92□□□□□ -0.34
PKP4-213ENST00000486254 GOLGA8JA6NMD2 632 aa12.92□□□□□ -0.34
PKP4-213ENST00000486254 PDHXO00330 501 aa12.92□□□□□ -0.34
PKP4-213ENST00000486254 TOM1L1O75674 476 aa12.92□□□□□ -0.34
PKP4-213ENST00000486254 HOXD8P13378 290 aaPredicted RBP12.92□□□□□ -0.34
PKP4-213ENST00000486254 PAFAH1B1P43034 410 aa12.92□□□□□ -0.34
PKP4-213ENST00000486254 SURF1Q15526 300 aa12.92□□□□□ -0.34
PKP4-213ENST00000486254 FAM110CQ1W6H9 321 aa12.92□□□□□ -0.34
PKP4-213ENST00000486254 HSDL1Q3SXM5 330 aa12.92□□□□□ -0.34
PKP4-213ENST00000486254 CFAP221Q4G0U5 840 aa12.92□□□□□ -0.34
PKP4-213ENST00000486254 GLE1Q53GS7 698 aaKnown RBP12.92□□□□□ -0.34
PKP4-213ENST00000486254 ARMCX2Q7L311 632 aa12.92□□□□□ -0.34
PKP4-213ENST00000486254 ARHGEF19Q8IW93 802 aa12.92□□□□□ -0.34
PKP4-213ENST00000486254 RHOT2Q8IXI1 618 aa12.92□□□□□ -0.34
PKP4-213ENST00000486254 NOA1Q8NC60 698 aaKnown RBP12.92□□□□□ -0.34
PKP4-213ENST00000486254 ZSWIM2Q8NEG5 633 aa12.92□□□□□ -0.34
PKP4-213ENST00000486254 TPCN2Q8NHX9 752 aa12.92□□□□□ -0.34
PKP4-213ENST00000486254 EPS8L1Q8TE68 723 aa12.92□□□□□ -0.34
PKP4-213ENST00000486254 CTNNBL1Q8WYA6 563 aaPredicted RBP12.92□□□□□ -0.34
PKP4-213ENST00000486254 GLG1Q92896 1179 aa12.92□□□□□ -0.34
PKP4-213ENST00000486254 SPATA33Q96N06 139 aa12.92□□□□□ -0.34
PKP4-213ENST00000486254 AGPAT1Q99943 283 aa12.92□□□□□ -0.34
PKP4-213ENST00000486254 GBA2Q9HCG7 927 aaPredicted RBP12.92□□□□□ -0.34
PKP4-213ENST00000486254 SUCLA2Q9P2R7 463 aaPredicted RBP12.92□□□□□ -0.34
PKP4-213ENST00000486254 NOCTQ9UK39 431 aaKnown RBP12.92□□□□□ -0.34
PKP4-213ENST00000486254 CCL15-CCL14A0A0B4J2E2 113 aa12.91□□□□□ -0.34
PKP4-213ENST00000486254 BTBD19C9JJ37 291 aa12.91□□□□□ -0.34
PKP4-213ENST00000486254 MSCO60682 206 aa12.91□□□□□ -0.34
PKP4-213ENST00000486254 MTA2O94776 668 aa12.91□□□□□ -0.34
PKP4-213ENST00000486254 TXNP10599 105 aaKnown RBP12.91□□□□□ -0.34
PKP4-213ENST00000486254 TNFAIP3P21580 790 aa12.91□□□□□ -0.34
PKP4-213ENST00000486254 GALCP54803 685 aa12.91□□□□□ -0.34
PKP4-213ENST00000486254 ARHGAP1Q07960 439 aa12.91□□□□□ -0.34
PKP4-213ENST00000486254 PRPF4BQ13523 1007 aaKnown RBP12.91□□□□□ -0.34
PKP4-213ENST00000486254 TFDP1Q14186 410 aa12.91□□□□□ -0.34
PKP4-213ENST00000486254 GRB14Q14449 540 aa12.91□□□□□ -0.34
PKP4-213ENST00000486254 PLCB4Q15147 1175 aa12.91□□□□□ -0.34
PKP4-213ENST00000486254 CCL15Q16663 113 aa12.91□□□□□ -0.34
PKP4-213ENST00000486254 ZNF484Q5JVG2 852 aa12.91□□□□□ -0.34
PKP4-213ENST00000486254 TRMT1LQ7Z2T5 733 aaKnown RBP12.91□□□□□ -0.34
PKP4-213ENST00000486254 ZNF677Q86XU0 584 aa12.91□□□□□ -0.34
PKP4-213ENST00000486254 IFNLR1Q8IU57 520 aaPredicted RBP12.91□□□□□ -0.34
PKP4-213ENST00000486254 GLYCTKQ8IVS8 523 aa12.91□□□□□ -0.34
PKP4-213ENST00000486254 BRSK2Q8IWQ3 736 aa12.91□□□□□ -0.34
PKP4-213ENST00000486254 ZBTB8OSQ8IWT0 167 aa12.91□□□□□ -0.34
PKP4-213ENST00000486254 FBXO16Q8IX29 292 aaPredicted RBP12.91□□□□□ -0.34
PKP4-213ENST00000486254 ANKRD13CQ8N6S4 541 aa12.91□□□□□ -0.34
PKP4-213ENST00000486254 PPTC7Q8NI37 304 aa12.91□□□□□ -0.34
PKP4-213ENST00000486254 CAGE1Q8TC20 777 aa12.91□□□□□ -0.34
PKP4-213ENST00000486254 U2AF1L4Q8WU68 220 aaKnown RBP12.91□□□□□ -0.34
PKP4-213ENST00000486254 BRI3BPQ8WY22 251 aa12.91□□□□□ -0.34
PKP4-213ENST00000486254 PBKQ96KB5 322 aa12.91□□□□□ -0.34
PKP4-213ENST00000486254 KREMEN1Q96MU8 473 aa12.91□□□□□ -0.34
PKP4-213ENST00000486254 FNBP1Q96RU3 617 aa12.91□□□□□ -0.34
PKP4-213ENST00000486254 CGRRF1Q99675 332 aa12.91□□□□□ -0.34
PKP4-213ENST00000486254 FAM213AQ9BRX8 229 aa12.91□□□□□ -0.34
PKP4-213ENST00000486254 MRPL4Q9BYD3 311 aaKnown RBP12.91□□□□□ -0.34
PKP4-213ENST00000486254 R3HDMLQ9H3Y0 253 aa12.91□□□□□ -0.34
PKP4-213ENST00000486254 ERAP1Q9NZ08 941 aa12.91□□□□□ -0.34
PKP4-213ENST00000486254 PDE2AO00408 941 aaPredicted RBP12.9□□□□□ -0.34
PKP4-213ENST00000486254 BUB1O43683 1085 aa12.9□□□□□ -0.34
PKP4-213ENST00000486254 GH1P01241 217 aa12.9□□□□□ -0.34
PKP4-213ENST00000486254 ADORA2AP29274 412 aa12.9□□□□□ -0.34
PKP4-213ENST00000486254 NAP1L1P55209 391 aaKnown RBP12.9□□□□□ -0.34
PKP4-213ENST00000486254 MAP2K1Q02750 393 aaPredicted RBP12.9□□□□□ -0.34
PKP4-213ENST00000486254 CLUL1Q15846 466 aa12.9□□□□□ -0.34
PKP4-213ENST00000486254 ENOX2Q16206 610 aaKnown RBP12.9□□□□□ -0.34
PKP4-213ENST00000486254 ARHGAP44Q17R89 818 aa12.9□□□□□ -0.34
PKP4-213ENST00000486254 MAP9Q49MG5 647 aa12.9□□□□□ -0.34
PKP4-213ENST00000486254 SPRYD7Q5W111 196 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms