RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 PHLPP2Q6ZVD8 1323 aa7.75□□□□□ -1.17
VPS50-218ENST00000485994 MEIS3P2A8K0S8 358 aa7.74□□□□□ -1.17
VPS50-218ENST00000485994 ITGA4P13612 1032 aa7.74□□□□□ -1.17
VPS50-218ENST00000485994 SCP2P22307 547 aa7.74□□□□□ -1.17
VPS50-218ENST00000485994 KCNA5P22460 613 aa7.74□□□□□ -1.17
VPS50-218ENST00000485994 GUCY2CP25092 1073 aa7.74□□□□□ -1.17
VPS50-218ENST00000485994 DSC1Q08554 894 aa7.74□□□□□ -1.17
VPS50-218ENST00000485994 SMAD2Q15796 467 aaKnown RBP7.74□□□□□ -1.17
VPS50-218ENST00000485994 MAPK6Q16659 721 aa7.74□□□□□ -1.17
VPS50-218ENST00000485994 DUSP6Q16828 381 aa7.74□□□□□ -1.17
VPS50-218ENST00000485994 PTCRAQ6ISU1 281 aaPredicted RBP7.74□□□□□ -1.17
VPS50-218ENST00000485994 RINT1Q6NUQ1 792 aa7.74□□□□□ -1.17
VPS50-218ENST00000485994 TMC7Q7Z402 723 aa7.74□□□□□ -1.17
VPS50-218ENST00000485994 ZNF280BQ86YH2 543 aa7.74□□□□□ -1.17
VPS50-218ENST00000485994 ZBTB8OSQ8IWT0 167 aa7.74□□□□□ -1.17
VPS50-218ENST00000485994 COLGALT2Q8IYK4 626 aa7.74□□□□□ -1.17
VPS50-218ENST00000485994 HACE1Q8IYU2 909 aa7.74□□□□□ -1.17
VPS50-218ENST00000485994 SYT2Q8N9I0 419 aaPredicted RBP7.74□□□□□ -1.17
VPS50-218ENST00000485994 URGCPQ8TCY9 931 aa7.74□□□□□ -1.17
VPS50-218ENST00000485994 MICAL1Q8TDZ2 1067 aa7.74□□□□□ -1.17
VPS50-218ENST00000485994 SNX29Q8TEQ0 813 aa7.74□□□□□ -1.17
VPS50-218ENST00000485994 LPPQ93052 612 aa7.74□□□□□ -1.17
VPS50-218ENST00000485994 TMEM169Q96HH4 297 aa7.74□□□□□ -1.17
VPS50-218ENST00000485994 IGSF21Q96ID5 467 aa7.74□□□□□ -1.17
VPS50-218ENST00000485994 IFT74Q96LB3 600 aa7.74□□□□□ -1.17
VPS50-218ENST00000485994 CCDC113Q9H0I3 377 aa7.74□□□□□ -1.17
VPS50-218ENST00000485994 BHMT2Q9H2M3 363 aa7.74□□□□□ -1.17
VPS50-218ENST00000485994 TLE6Q9H808 572 aa7.74□□□□□ -1.17
VPS50-218ENST00000485994 GPRC5CQ9NQ84 441 aa7.74□□□□□ -1.17
VPS50-218ENST00000485994 CLDND1Q9NY35 253 aa7.74□□□□□ -1.17
VPS50-218ENST00000485994 CLEC1BQ9P126 229 aa7.74□□□□□ -1.17
VPS50-218ENST00000485994 FAN1Q9Y2M0 1017 aa7.74□□□□□ -1.17
VPS50-218ENST00000485994 IPPQ9Y573 584 aa7.74□□□□□ -1.17
VPS50-218ENST00000485994 TDRD15B5MCY1 1934 aaKnown RBP7.74□□□□□ -1.17
VPS50-218ENST00000485994 MTCL1Q9Y4B5 1905 aaKnown RBP7.74□□□□□ -1.17
VPS50-218ENST00000485994 C2orf71A6NGG8 1288 aa7.73□□□□□ -1.17
VPS50-218ENST00000485994 ARL5CA6NH57 179 aa7.73□□□□□ -1.17
VPS50-218ENST00000485994 LRRIQ4A6NIV6 560 aa7.73□□□□□ -1.17
VPS50-218ENST00000485994 E9PMD0 336 aa7.73□□□□□ -1.17
VPS50-218ENST00000485994 K7ERI5 159 aa7.73□□□□□ -1.17
VPS50-218ENST00000485994 N4BP3O15049 544 aa7.73□□□□□ -1.17
VPS50-218ENST00000485994 MBTPS2O43462 519 aa7.73□□□□□ -1.17
VPS50-218ENST00000485994 LILRB3O75022 631 aa7.73□□□□□ -1.17
VPS50-218ENST00000485994 DDHD2O94830 711 aa7.73□□□□□ -1.17
VPS50-218ENST00000485994 CTSAP10619 480 aa7.73□□□□□ -1.17
VPS50-218ENST00000485994 HOXB8P17481 243 aaPredicted RBP7.73□□□□□ -1.17
VPS50-218ENST00000485994 SYT1P21579 422 aa7.73□□□□□ -1.17
VPS50-218ENST00000485994 GTF2F1P35269 517 aaKnown RBP eCLIP7.73□□□□□ -1.17
VPS50-218ENST00000485994 LONP1P36776 959 aaKnown RBP7.73□□□□□ -1.17
VPS50-218ENST00000485994 NRIP1P48552 1158 aa7.73□□□□□ -1.17
VPS50-218ENST00000485994 RNASELQ05823 741 aaKnown RBP7.73□□□□□ -1.17
VPS50-218ENST00000485994 DLX2Q07687 328 aaPredicted RBP7.73□□□□□ -1.17
VPS50-218ENST00000485994 SMAD4Q13485 552 aaKnown RBP7.73□□□□□ -1.17
VPS50-218ENST00000485994 SMC1AQ14683 1233 aaKnown RBP7.73□□□□□ -1.17
VPS50-218ENST00000485994 ADGRD2Q7Z7M1 963 aa7.73□□□□□ -1.17
VPS50-218ENST00000485994 RNF168Q8IYW5 571 aaPredicted RBP7.73□□□□□ -1.17
VPS50-218ENST00000485994 DAW1Q8N136 415 aa7.73□□□□□ -1.17
VPS50-218ENST00000485994 RNF169Q8NCN4 708 aa7.73□□□□□ -1.17
VPS50-218ENST00000485994 SMRP1Q8NCR6 262 aa7.73□□□□□ -1.17
VPS50-218ENST00000485994 GSTCDQ8NEC7 633 aa7.73□□□□□ -1.17
VPS50-218ENST00000485994 SPIRE2Q8WWL2 714 aa7.73□□□□□ -1.17
VPS50-218ENST00000485994 BSNDQ8WZ55 320 aa7.73□□□□□ -1.17
VPS50-218ENST00000485994 EIF2AQ9BY44 585 aaKnown RBP7.73□□□□□ -1.17
VPS50-218ENST00000485994 CCSER1Q9C0I3 900 aa7.73□□□□□ -1.17
VPS50-218ENST00000485994 ZSCAN16Q9H4T2 348 aaPredicted RBP7.73□□□□□ -1.17
VPS50-218ENST00000485994 MIOSQ9NXC5 875 aa7.73□□□□□ -1.17
VPS50-218ENST00000485994 ARHGAP28Q9P2N2 729 aa7.73□□□□□ -1.17
VPS50-218ENST00000485994 CD207Q9UJ71 328 aa7.73□□□□□ -1.17
VPS50-218ENST00000485994 TNFSF13BQ9Y275 285 aa7.73□□□□□ -1.17
VPS50-218ENST00000485994 SSX2IPQ9Y2D8 614 aa7.73□□□□□ -1.17
VPS50-218ENST00000485994 NT5C1B-RDH14C9J2C7 533 aa7.72□□□□□ -1.17
VPS50-218ENST00000485994 PI4K2BG5E9Z4 385 aa7.72□□□□□ -1.17
VPS50-218ENST00000485994 H3BQ06 376 aaPredicted RBP7.72□□□□□ -1.17
VPS50-218ENST00000485994 K7ELQ4 463 aaPredicted RBP7.72□□□□□ -1.17
VPS50-218ENST00000485994 NRP1O14786 923 aa7.72□□□□□ -1.17
VPS50-218ENST00000485994 NR1I2O75469 434 aa7.72□□□□□ -1.17
VPS50-218ENST00000485994 PAPLNO95428 1278 aa7.72□□□□□ -1.17
VPS50-218ENST00000485994 CXCL14O95715 111 aa7.72□□□□□ -1.17
VPS50-218ENST00000485994 GLP2RO95838 553 aa7.72□□□□□ -1.17
VPS50-218ENST00000485994 CDC25AP30304 524 aa7.72□□□□□ -1.17
VPS50-218ENST00000485994 DDIT3P35638 169 aa7.72□□□□□ -1.17
VPS50-218ENST00000485994 SLC11A1P49279 550 aa7.72□□□□□ -1.17
VPS50-218ENST00000485994 AFF1P51825 1210 aaKnown RBP7.72□□□□□ -1.17
VPS50-218ENST00000485994 SLC12A3P55017 1021 aa7.72□□□□□ -1.17
VPS50-218ENST00000485994 PRPF4BQ13523 1007 aaKnown RBP7.72□□□□□ -1.17
VPS50-218ENST00000485994 TMEM119Q4V9L6 283 aa7.72□□□□□ -1.17
VPS50-218ENST00000485994 XKR4Q5GH76 650 aa7.72□□□□□ -1.17
VPS50-218ENST00000485994 MAEAQ7L5Y9 396 aa7.72□□□□□ -1.17
VPS50-218ENST00000485994 KCNK18Q7Z418 384 aa7.72□□□□□ -1.17
VPS50-218ENST00000485994 APBB1IPQ7Z5R6 666 aaPredicted RBP7.72□□□□□ -1.17
VPS50-218ENST00000485994 RBM23Q86U06 439 aaKnown RBP7.72□□□□□ -1.17
VPS50-218ENST00000485994 ADHFE1Q8IWW8 467 aa7.72□□□□□ -1.17
VPS50-218ENST00000485994 GJD3Q8N144 294 aa7.72□□□□□ -1.17
VPS50-218ENST00000485994 VPS52Q8N1B4 723 aa7.72□□□□□ -1.17
VPS50-218ENST00000485994 DEPTORQ8TB45 409 aa7.72□□□□□ -1.17
VPS50-218ENST00000485994 SUSD6Q92537 303 aa7.72□□□□□ -1.17
VPS50-218ENST00000485994 CPB2Q96IY4 423 aa7.72□□□□□ -1.17
VPS50-218ENST00000485994 DRC1Q96MC2 740 aa7.72□□□□□ -1.17
VPS50-218ENST00000485994 PNMA5Q96PV4 448 aa7.72□□□□□ -1.17
VPS50-218ENST00000485994 FAM193BQ96PV7 902 aaPredicted RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms