RNA–Protein interactions for RNA: ENST00000485870.1

COL1A1-206, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 403 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-206ENST00000485870 CARNS1A5YM72 827 aa20.27■□□□□ 0.84
COL1A1-206ENST00000485870 HIDE1A8MVS5 230 aa20.27■□□□□ 0.84
COL1A1-206ENST00000485870 INPPL1O15357 1258 aa20.27■□□□□ 0.84
COL1A1-206ENST00000485870 TBX10O75333 385 aa20.27■□□□□ 0.84
COL1A1-206ENST00000485870 CA8P35219 290 aa20.27■□□□□ 0.84
COL1A1-206ENST00000485870 NDUFV1P49821 464 aa20.27■□□□□ 0.84
COL1A1-206ENST00000485870 ADAM15Q13444 863 aa20.27■□□□□ 0.84
COL1A1-206ENST00000485870 MCM6Q14566 821 aa20.27■□□□□ 0.84
COL1A1-206ENST00000485870 ARSHQ5FYA8 562 aa20.27■□□□□ 0.84
COL1A1-206ENST00000485870 ATF7IP2Q5U623 682 aa20.27■□□□□ 0.84
COL1A1-206ENST00000485870 PTCRAQ6ISU1 281 aaPredicted RBP20.27■□□□□ 0.84
COL1A1-206ENST00000485870 EFHBQ8N7U6 833 aa20.27■□□□□ 0.84
COL1A1-206ENST00000485870 RAD54LQ92698 747 aa20.27■□□□□ 0.84
COL1A1-206ENST00000485870 CCSER1Q9C0I3 900 aa20.27■□□□□ 0.84
COL1A1-206ENST00000485870 C17orf75Q9HAS0 396 aa20.27■□□□□ 0.84
COL1A1-206ENST00000485870 NGRNQ9NPE2 291 aaKnown RBP20.27■□□□□ 0.84
COL1A1-206ENST00000485870 KCND2Q9NZV8 630 aa20.27■□□□□ 0.84
COL1A1-206ENST00000485870 FAN1Q9Y2M0 1017 aa20.27■□□□□ 0.84
COL1A1-206ENST00000485870 PLS3P13797 630 aa20.26■□□□□ 0.83
COL1A1-206ENST00000485870 SLC39A14Q15043 492 aa20.26■□□□□ 0.83
COL1A1-206ENST00000485870 TAS1R3Q7RTX0 852 aa20.26■□□□□ 0.83
COL1A1-206ENST00000485870 VPS52Q8N1B4 723 aa20.26■□□□□ 0.83
COL1A1-206ENST00000485870 RPS6KC1Q96S38 1066 aa20.26■□□□□ 0.83
COL1A1-206ENST00000485870 TMEM175Q9BSA9 504 aa20.26■□□□□ 0.83
COL1A1-206ENST00000485870 TMEM134Q9H6X4 195 aa20.26■□□□□ 0.83
COL1A1-206ENST00000485870 SNTG2Q9NY99 539 aa20.26■□□□□ 0.83
COL1A1-206ENST00000485870 PRG3Q9Y2Y8 225 aaPredicted RBP20.26■□□□□ 0.83
COL1A1-206ENST00000485870 RBM19Q9Y4C8 960 aaKnown RBP20.26■□□□□ 0.83
COL1A1-206ENST00000485870 MUC3AQ02505 3323 aa20.25■□□□□ 0.83
COL1A1-206ENST00000485870 NRP1O14786 923 aa20.25■□□□□ 0.83
COL1A1-206ENST00000485870 ALDH2P05091 517 aa20.25■□□□□ 0.83
COL1A1-206ENST00000485870 IL9P15248 144 aa20.25■□□□□ 0.83
COL1A1-206ENST00000485870 OR1G1P47890 313 aa20.25■□□□□ 0.83
COL1A1-206ENST00000485870 RBM10P98175 930 aaKnown RBP20.25■□□□□ 0.83
COL1A1-206ENST00000485870 SMC1AQ14683 1233 aaKnown RBP20.25■□□□□ 0.83
COL1A1-206ENST00000485870 STK38Q15208 465 aa20.25■□□□□ 0.83
COL1A1-206ENST00000485870 DUSP6Q16828 381 aa20.25■□□□□ 0.83
COL1A1-206ENST00000485870 DCAF4L1Q3SXM0 396 aa20.25■□□□□ 0.83
COL1A1-206ENST00000485870 DDX53Q86TM3 631 aaKnown RBP20.25■□□□□ 0.83
COL1A1-206ENST00000485870 COLGALT2Q8IYK4 626 aa20.25■□□□□ 0.83
COL1A1-206ENST00000485870 AUTS2Q8WXX7 1259 aa20.25■□□□□ 0.83
COL1A1-206ENST00000485870 REEP2Q9BRK0 252 aa20.25■□□□□ 0.83
COL1A1-206ENST00000485870 MRPL4Q9BYD3 311 aaKnown RBP20.25■□□□□ 0.83
COL1A1-206ENST00000485870 RECQL4O94761 1208 aa20.24■□□□□ 0.83
COL1A1-206ENST00000485870 GLP2RO95838 553 aa20.24■□□□□ 0.83
COL1A1-206ENST00000485870 KRT18P05783 430 aaKnown RBP20.24■□□□□ 0.83
COL1A1-206ENST00000485870 ZSCAN22P10073 491 aaPredicted RBP20.24■□□□□ 0.83
COL1A1-206ENST00000485870 TXLNAP40222 546 aa20.24■□□□□ 0.83
COL1A1-206ENST00000485870 NASPP49321 788 aaPredicted RBP20.24■□□□□ 0.83
COL1A1-206ENST00000485870 SMTNP53814 917 aa20.24■□□□□ 0.83
COL1A1-206ENST00000485870 DSC1Q08554 894 aa20.24■□□□□ 0.83
COL1A1-206ENST00000485870 FOXD4L6Q3SYB3 417 aaPredicted RBP20.24■□□□□ 0.83
COL1A1-206ENST00000485870 FOXD4L3Q6VB84 417 aaPredicted RBP20.24■□□□□ 0.83
COL1A1-206ENST00000485870 KRI1Q8N9T8 703 aaKnown RBP20.24■□□□□ 0.83
COL1A1-206ENST00000485870 GSTCDQ8NEC7 633 aa20.24■□□□□ 0.83
COL1A1-206ENST00000485870 SPIRE2Q8WWL2 714 aa20.24■□□□□ 0.83
COL1A1-206ENST00000485870 LARP4BQ92615 738 aaKnown RBP20.24■□□□□ 0.83
COL1A1-206ENST00000485870 ZNF396Q96N95 335 aaPredicted RBP20.24■□□□□ 0.83
COL1A1-206ENST00000485870 CDCA3Q99618 268 aaPredicted RBP20.24■□□□□ 0.83
COL1A1-206ENST00000485870 ACO2Q99798 780 aaKnown RBP20.24■□□□□ 0.83
COL1A1-206ENST00000485870 TARS2Q9BW92 718 aaKnown RBP20.24■□□□□ 0.83
COL1A1-206ENST00000485870 VN1R3Q9BXE9 311 aa20.24■□□□□ 0.83
COL1A1-206ENST00000485870 ZBP1Q9H171 429 aa20.24■□□□□ 0.83
COL1A1-206ENST00000485870 TFIP11Q9UBB9 837 aaKnown RBP20.24■□□□□ 0.83
COL1A1-206ENST00000485870 CCDC39Q9UFE4 941 aa20.24■□□□□ 0.83
COL1A1-206ENST00000485870 BARX2Q9UMQ3 279 aaPredicted RBP20.24■□□□□ 0.83
COL1A1-206ENST00000485870 TNFSF13BQ9Y275 285 aa20.24■□□□□ 0.83
COL1A1-206ENST00000485870 GDAQ9Y2T3 454 aa20.24■□□□□ 0.83
COL1A1-206ENST00000485870 ZMYM2Q9UBW7 1377 aa20.23■□□□□ 0.83
COL1A1-206ENST00000485870 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.23■□□□□ 0.83
COL1A1-206ENST00000485870 GRXCR2A6NFK2 248 aa20.23■□□□□ 0.83
COL1A1-206ENST00000485870 C2orf71A6NGG8 1288 aa20.23■□□□□ 0.83
COL1A1-206ENST00000485870 CXCL14O95715 111 aa20.23■□□□□ 0.83
COL1A1-206ENST00000485870 GRIK3Q13003 919 aa20.23■□□□□ 0.83
COL1A1-206ENST00000485870 STRN3Q13033 797 aa20.23■□□□□ 0.83
COL1A1-206ENST00000485870 BMS1Q14692 1282 aaKnown RBP20.23■□□□□ 0.83
COL1A1-206ENST00000485870 PUS10Q3MIT2 529 aaKnown RBP20.23■□□□□ 0.83
COL1A1-206ENST00000485870 ZNF568Q3ZCX4 644 aa20.23■□□□□ 0.83
COL1A1-206ENST00000485870 LLGL2Q6P1M3 1020 aa20.23■□□□□ 0.83
COL1A1-206ENST00000485870 APBB1IPQ7Z5R6 666 aaPredicted RBP20.23■□□□□ 0.83
COL1A1-206ENST00000485870 MRPL43Q8N983 215 aaKnown RBP20.23■□□□□ 0.83
COL1A1-206ENST00000485870 TMEM161BQ8NDZ6 487 aa20.23■□□□□ 0.83
COL1A1-206ENST00000485870 VN1R2Q8NFZ6 395 aa20.23■□□□□ 0.83
COL1A1-206ENST00000485870 NTPCRQ9BSD7 190 aaKnown RBP20.23■□□□□ 0.83
COL1A1-206ENST00000485870 MARCH5Q9NX47 278 aa20.23■□□□□ 0.83
COL1A1-206ENST00000485870 CLEC1BQ9P126 229 aa20.23■□□□□ 0.83
COL1A1-206ENST00000485870 LARSQ9P2J5 1176 aaKnown RBP20.23■□□□□ 0.83
COL1A1-206ENST00000485870 CD207Q9UJ71 328 aa20.23■□□□□ 0.83
COL1A1-206ENST00000485870 ODF2LQ9ULJ1 636 aa20.23■□□□□ 0.83
COL1A1-206ENST00000485870 MORC2Q9Y6X9 1032 aaPredicted RBP20.23■□□□□ 0.83
COL1A1-206ENST00000485870 BDP1A6H8Y1 2624 aa20.23■□□□□ 0.83
COL1A1-206ENST00000485870 F8W810 466 aa20.22■□□□□ 0.83
COL1A1-206ENST00000485870 TNFRSF10AO00220 468 aa20.22■□□□□ 0.83
COL1A1-206ENST00000485870 FAM13AO94988 1023 aa20.22■□□□□ 0.83
COL1A1-206ENST00000485870 F13A1P00488 732 aa20.22■□□□□ 0.83
COL1A1-206ENST00000485870 PKP1Q13835 747 aa20.22■□□□□ 0.83
COL1A1-206ENST00000485870 ZBTB33Q86T24 672 aa20.22■□□□□ 0.83
COL1A1-206ENST00000485870 MYCT1Q8N699 235 aa20.22■□□□□ 0.83
COL1A1-206ENST00000485870 LINC00301Q8NCQ3 95 aa20.22■□□□□ 0.83
COL1A1-206ENST00000485870 CDT1Q9H211 546 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms