RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 ROR1Q01973 937 aa4.51□□□□□ -1.69
PRPF38B-205ENST00000485810 PRKG2Q13237 762 aa4.51□□□□□ -1.69
PRPF38B-205ENST00000485810 KRT72Q14CN4 511 aa4.51□□□□□ -1.69
PRPF38B-205ENST00000485810 MTHFSDQ2M296 383 aaKnown RBP4.51□□□□□ -1.69
PRPF38B-205ENST00000485810 VWA3BQ502W6 1294 aa4.51□□□□□ -1.69
PRPF38B-205ENST00000485810 ANKRD39Q53RE8 183 aa4.51□□□□□ -1.69
PRPF38B-205ENST00000485810 CCDC30Q5VVM6 783 aa4.51□□□□□ -1.69
PRPF38B-205ENST00000485810 GALNT18Q6P9A2 607 aa4.51□□□□□ -1.69
PRPF38B-205ENST00000485810 RPTNQ6XPR3 784 aa4.51□□□□□ -1.69
PRPF38B-205ENST00000485810 TOGARAM2Q6ZUX3 1019 aa4.51□□□□□ -1.69
PRPF38B-205ENST00000485810 BTN2A1Q7KYR7 527 aa4.51□□□□□ -1.69
PRPF38B-205ENST00000485810 MCM10Q7L590 875 aa4.51□□□□□ -1.69
PRPF38B-205ENST00000485810 EEPD1Q7L9B9 569 aa4.51□□□□□ -1.69
PRPF38B-205ENST00000485810 ZBTB46Q86UZ6 589 aa4.51□□□□□ -1.69
PRPF38B-205ENST00000485810 C16orf71Q8IYS4 520 aaPredicted RBP4.51□□□□□ -1.69
PRPF38B-205ENST00000485810 TAB3Q8N5C8 712 aaPredicted RBP4.51□□□□□ -1.69
PRPF38B-205ENST00000485810 NAT16Q8N8M0 369 aa4.51□□□□□ -1.69
PRPF38B-205ENST00000485810 OTUD7AQ8TE49 926 aaPredicted RBP4.51□□□□□ -1.69
PRPF38B-205ENST00000485810 CPLX3Q8WVH0 158 aa4.51□□□□□ -1.69
PRPF38B-205ENST00000485810 RTF1Q92541 710 aaKnown RBP4.51□□□□□ -1.69
PRPF38B-205ENST00000485810 TNIP3Q96KP6 325 aa4.51□□□□□ -1.69
PRPF38B-205ENST00000485810 FCRL3Q96P31 734 aaPredicted RBP4.51□□□□□ -1.69
PRPF38B-205ENST00000485810 CAMKK2Q96RR4 588 aa4.51□□□□□ -1.69
PRPF38B-205ENST00000485810 SMAD5Q99717 465 aaKnown RBP4.51□□□□□ -1.69
PRPF38B-205ENST00000485810 SARGQ9BW04 601 aa4.51□□□□□ -1.69
PRPF38B-205ENST00000485810 DEF6Q9H4E7 631 aa4.51□□□□□ -1.69
PRPF38B-205ENST00000485810 RASSF1Q9NS23 344 aa4.51□□□□□ -1.69
PRPF38B-205ENST00000485810 OBP2AQ9NY56 170 aa4.51□□□□□ -1.69
PRPF38B-205ENST00000485810 RABL2AQ9UBK7 228 aaPredicted RBP4.51□□□□□ -1.69
PRPF38B-205ENST00000485810 TBK1Q9UHD2 729 aa4.51□□□□□ -1.69
PRPF38B-205ENST00000485810 PCSK1NQ9UHG2 260 aa4.51□□□□□ -1.69
PRPF38B-205ENST00000485810 ZNF180Q9UJW8 692 aa4.51□□□□□ -1.69
PRPF38B-205ENST00000485810 PALD1Q9ULE6 856 aa4.51□□□□□ -1.69
PRPF38B-205ENST00000485810 TPCN1Q9ULQ1 816 aa4.51□□□□□ -1.69
PRPF38B-205ENST00000485810 ZDHHC9Q9Y397 364 aa4.51□□□□□ -1.69
PRPF38B-205ENST00000485810 DDX49Q9Y6V7 483 aaKnown RBP4.51□□□□□ -1.69
PRPF38B-205ENST00000485810 ITIH6Q6UXX5 1313 aa4.51□□□□□ -1.69
PRPF38B-205ENST00000485810 USP42Q9H9J4 1324 aaKnown RBP4.51□□□□□ -1.69
PRPF38B-205ENST00000485810 CEMIPQ8WUJ3 1361 aa4.51□□□□□ -1.69
PRPF38B-205ENST00000485810 ADGRL3Q9HAR2 1447 aa4.51□□□□□ -1.69
PRPF38B-205ENST00000485810 XRN1Q8IZH2 1706 aaKnown RBP4.5□□□□□ -1.69
PRPF38B-205ENST00000485810 FMN2Q9NZ56 1722 aa4.5□□□□□ -1.69
PRPF38B-205ENST00000485810 A0A1W2PQH9 124 aa4.5□□□□□ -1.69
PRPF38B-205ENST00000485810 WTIPA6NIX2 430 aaPredicted RBP4.5□□□□□ -1.69
PRPF38B-205ENST00000485810 VSTM5A8MXK1 200 aa4.5□□□□□ -1.69
PRPF38B-205ENST00000485810 J3KRW8 73 aa4.5□□□□□ -1.69
PRPF38B-205ENST00000485810 KATNA1O75449 491 aa4.5□□□□□ -1.69
PRPF38B-205ENST00000485810 PLA2G1BP04054 148 aaKnown RBP4.5□□□□□ -1.69
PRPF38B-205ENST00000485810 MPOP05164 745 aa4.5□□□□□ -1.69
PRPF38B-205ENST00000485810 CD3EP07766 207 aa4.5□□□□□ -1.69
PRPF38B-205ENST00000485810 INSRRP14616 1297 aa4.5□□□□□ -1.69
PRPF38B-205ENST00000485810 PHKG2P15735 406 aa4.5□□□□□ -1.69
PRPF38B-205ENST00000485810 POU3F3P20264 500 aaPredicted RBP4.5□□□□□ -1.69
PRPF38B-205ENST00000485810 CHMLP26374 656 aa4.5□□□□□ -1.69
PRPF38B-205ENST00000485810 ATP6V1E1P36543 226 aa4.5□□□□□ -1.69
PRPF38B-205ENST00000485810 STT3AP46977 705 aa4.5□□□□□ -1.69
PRPF38B-205ENST00000485810 LIMS1P48059 325 aa4.5□□□□□ -1.69
PRPF38B-205ENST00000485810 SOX9P48436 509 aa4.5□□□□□ -1.69
PRPF38B-205ENST00000485810 GIPRP48546 466 aa4.5□□□□□ -1.69
PRPF38B-205ENST00000485810 KRT83P78385 493 aa4.5□□□□□ -1.69
PRPF38B-205ENST00000485810 CAP1Q01518 475 aa4.5□□□□□ -1.69
PRPF38B-205ENST00000485810 PFKPQ01813 784 aa4.5□□□□□ -1.69
PRPF38B-205ENST00000485810 APBA1Q02410 837 aa4.5□□□□□ -1.69
PRPF38B-205ENST00000485810 MVKQ03426 396 aa4.5□□□□□ -1.69
PRPF38B-205ENST00000485810 PLP2Q04941 152 aa4.5□□□□□ -1.69
PRPF38B-205ENST00000485810 DMTNQ08495 405 aa4.5□□□□□ -1.69
PRPF38B-205ENST00000485810 COX10Q12887 443 aa4.5□□□□□ -1.69
PRPF38B-205ENST00000485810 PLCB4Q15147 1175 aa4.5□□□□□ -1.69
PRPF38B-205ENST00000485810 ELF2Q15723 593 aa4.5□□□□□ -1.69
PRPF38B-205ENST00000485810 KRT24Q2M2I5 525 aa4.5□□□□□ -1.69
PRPF38B-205ENST00000485810 DPY19L1Q2PZI1 675 aa4.5□□□□□ -1.69
PRPF38B-205ENST00000485810 COBLL1Q53SF7 1204 aa4.5□□□□□ -1.69
PRPF38B-205ENST00000485810 C2orf27AQ580R0 203 aa4.5□□□□□ -1.69
PRPF38B-205ENST00000485810 CYB5RLQ6IPT4 315 aa4.5□□□□□ -1.69
PRPF38B-205ENST00000485810 HHIPL2Q6UWX4 724 aa4.5□□□□□ -1.69
PRPF38B-205ENST00000485810 ADAT2Q7Z6V5 191 aaKnown RBP4.5□□□□□ -1.69
PRPF38B-205ENST00000485810 PNMA8AQ86V59 439 aaPredicted RBP4.5□□□□□ -1.69
PRPF38B-205ENST00000485810 ADGRG2Q8IZP9 1017 aa4.5□□□□□ -1.69
PRPF38B-205ENST00000485810 FAM169BQ8N8A8 192 aa4.5□□□□□ -1.69
PRPF38B-205ENST00000485810 SSH3Q8TE77 659 aa4.5□□□□□ -1.69
PRPF38B-205ENST00000485810 THAP3Q8WTV1 239 aaPredicted RBP4.5□□□□□ -1.69
PRPF38B-205ENST00000485810 GIMAP1Q8WWP7 306 aa4.5□□□□□ -1.69
PRPF38B-205ENST00000485810 SH3KBP1Q96B97 665 aa4.5□□□□□ -1.69
PRPF38B-205ENST00000485810 MFSD3Q96ES6 412 aa4.5□□□□□ -1.69
PRPF38B-205ENST00000485810 MCMBPQ9BTE3 642 aa4.5□□□□□ -1.69
PRPF38B-205ENST00000485810 BDH2Q9BUT1 245 aa4.5□□□□□ -1.69
PRPF38B-205ENST00000485810 STK31Q9BXU1 1019 aa4.5□□□□□ -1.69
PRPF38B-205ENST00000485810 ASPSCR1Q9BZE9 553 aa4.5□□□□□ -1.69
PRPF38B-205ENST00000485810 LRRCC1Q9C099 1032 aa4.5□□□□□ -1.69
PRPF38B-205ENST00000485810 RMI1Q9H9A7 625 aa4.5□□□□□ -1.69
PRPF38B-205ENST00000485810 HELLSQ9NRZ9 838 aa4.5□□□□□ -1.69
PRPF38B-205ENST00000485810 ARHGAP28Q9P2N2 729 aa4.5□□□□□ -1.69
PRPF38B-205ENST00000485810 TSPYL4Q9UJ04 414 aa4.5□□□□□ -1.69
PRPF38B-205ENST00000485810 CD2APQ9Y5K6 639 aa4.5□□□□□ -1.69
PRPF38B-205ENST00000485810 HCFC2Q9Y5Z7 792 aa4.5□□□□□ -1.69
PRPF38B-205ENST00000485810 OVOS2A0A0G2JMS6 1433 aa4.5□□□□□ -1.69
PRPF38B-205ENST00000485810 NCAPD2Q15021 1401 aa4.5□□□□□ -1.69
PRPF38B-205ENST00000485810 CEP170BQ9Y4F5 1589 aaPredicted RBP4.5□□□□□ -1.69
PRPF38B-205ENST00000485810 FAM208AQ9UK61 1670 aaKnown RBP4.5□□□□□ -1.69
PRPF38B-205ENST00000485810 CRYBG1Q9Y4K1 1723 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms