RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 MEFVO15553 781 aaPredicted RBP17.3■□□□□ 0.36
APOE-205ENST00000485628 EVI5O60447 810 aa17.3■□□□□ 0.36
APOE-205ENST00000485628 PFKMP08237 780 aa17.3■□□□□ 0.36
APOE-205ENST00000485628 CSF2RAP15509 400 aa17.3■□□□□ 0.36
APOE-205ENST00000485628 ZNF18P17022 549 aa17.3■□□□□ 0.36
APOE-205ENST00000485628 MARSP56192 900 aaKnown RBP17.3■□□□□ 0.36
APOE-205ENST00000485628 NFX1Q12986 1120 aaKnown RBP17.3■□□□□ 0.36
APOE-205ENST00000485628 FILIP1Q7Z7B0 1213 aa17.3■□□□□ 0.36
APOE-205ENST00000485628 MRPL10Q7Z7H8 261 aaKnown RBP17.3■□□□□ 0.36
APOE-205ENST00000485628 CDR2LQ86X02 465 aaPredicted RBP17.3■□□□□ 0.36
APOE-205ENST00000485628 C7orf61Q8IZ16 206 aa17.3■□□□□ 0.36
APOE-205ENST00000485628 SMG8Q8ND04 991 aaKnown RBP17.3■□□□□ 0.36
APOE-205ENST00000485628 FAM200AQ8TCP9 573 aa17.3■□□□□ 0.36
APOE-205ENST00000485628 BICD1Q96G01 975 aa17.3■□□□□ 0.36
APOE-205ENST00000485628 CEP63Q96MT8 703 aa17.3■□□□□ 0.36
APOE-205ENST00000485628 EIF2AQ9BY44 585 aaKnown RBP17.3■□□□□ 0.36
APOE-205ENST00000485628 NAT10Q9H0A0 1025 aaKnown RBP17.3■□□□□ 0.36
APOE-205ENST00000485628 HSPBP1Q9NZL4 362 aa17.3■□□□□ 0.36
APOE-205ENST00000485628 PIN4Q9Y237 131 aaKnown RBP17.3■□□□□ 0.36
APOE-205ENST00000485628 ENPP3O14638 875 aa17.29■□□□□ 0.36
APOE-205ENST00000485628 OGTO15294 1046 aa17.29■□□□□ 0.36
APOE-205ENST00000485628 ATF7P17544 494 aaPredicted RBP17.29■□□□□ 0.36
APOE-205ENST00000485628 CASP4P49662 377 aa17.29■□□□□ 0.36
APOE-205ENST00000485628 MYL5Q02045 173 aa17.29■□□□□ 0.36
APOE-205ENST00000485628 NCBP1Q09161 790 aaKnown RBP17.29■□□□□ 0.36
APOE-205ENST00000485628 ADAM9Q13443 819 aa17.29■□□□□ 0.36
APOE-205ENST00000485628 NOLC1Q14978 699 aaKnown RBP eCLIP17.29■□□□□ 0.36
APOE-205ENST00000485628 DCAF4L1Q3SXM0 396 aa17.29■□□□□ 0.36
APOE-205ENST00000485628 CDKAL1Q5VV42 579 aa17.29■□□□□ 0.36
APOE-205ENST00000485628 ARMCX5Q6P1M9 558 aa17.29■□□□□ 0.36
APOE-205ENST00000485628 CNKSR3Q6P9H4 555 aa17.29■□□□□ 0.36
APOE-205ENST00000485628 ZNF598Q86UK7 904 aaKnown RBP17.29■□□□□ 0.36
APOE-205ENST00000485628 TMEM199Q8N511 208 aa17.29■□□□□ 0.36
APOE-205ENST00000485628 SEPT8Q92599 483 aa17.29■□□□□ 0.36
APOE-205ENST00000485628 TSG101Q99816 390 aa17.29■□□□□ 0.36
APOE-205ENST00000485628 ADAM2Q99965 735 aa17.29■□□□□ 0.36
APOE-205ENST00000485628 MKNK1Q9BUB5 465 aa17.29■□□□□ 0.36
APOE-205ENST00000485628 THAP9Q9H5L6 903 aa17.29■□□□□ 0.36
APOE-205ENST00000485628 PRDM5Q9NQX1 630 aaPredicted RBP17.29■□□□□ 0.36
APOE-205ENST00000485628 CPSF3Q9UKF6 684 aaKnown RBP17.29■□□□□ 0.36
APOE-205ENST00000485628 AGO2Q9UKV8 859 aaKnown RBP17.29■□□□□ 0.36
APOE-205ENST00000485628 ANK1P16157 1881 aa17.29■□□□□ 0.36
APOE-205ENST00000485628 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.28■□□□□ 0.36
APOE-205ENST00000485628 EXTL3O43909 919 aa17.28■□□□□ 0.36
APOE-205ENST00000485628 AKAP3O75969 853 aa17.28■□□□□ 0.36
APOE-205ENST00000485628 LDHAP00338 332 aaKnown RBP17.28■□□□□ 0.36
APOE-205ENST00000485628 NR2F2P24468 414 aa17.28■□□□□ 0.36
APOE-205ENST00000485628 RPL13P26373 211 aaKnown RBP17.28■□□□□ 0.36
APOE-205ENST00000485628 GRM5P41594 1212 aa17.28■□□□□ 0.36
APOE-205ENST00000485628 ZNF568Q3ZCX4 644 aa17.28■□□□□ 0.36
APOE-205ENST00000485628 XKR4Q5GH76 650 aa17.28■□□□□ 0.36
APOE-205ENST00000485628 ZBTB41Q5SVQ8 909 aa17.28■□□□□ 0.36
APOE-205ENST00000485628 ALKAL1Q6UXT8 129 aa17.28■□□□□ 0.36
APOE-205ENST00000485628 CSGALNACT2Q8N6G5 542 aa17.28■□□□□ 0.36
APOE-205ENST00000485628 XXYLT1Q8NBI6 393 aa17.28■□□□□ 0.36
APOE-205ENST00000485628 POMGNT1Q8WZA1 660 aa17.28■□□□□ 0.36
APOE-205ENST00000485628 BADQ92934 168 aa17.28■□□□□ 0.36
APOE-205ENST00000485628 MFSD14AQ96MC6 490 aa17.28■□□□□ 0.36
APOE-205ENST00000485628 SRRTQ9BXP5 876 aaKnown RBP17.28■□□□□ 0.36
APOE-205ENST00000485628 PCIF1Q9H4Z3 704 aa17.28■□□□□ 0.36
APOE-205ENST00000485628 KIAA1586Q9HCI6 787 aa17.28■□□□□ 0.36
APOE-205ENST00000485628 IL23AQ9NPF7 189 aa17.28■□□□□ 0.36
APOE-205ENST00000485628 FAM105AQ9NUU6 356 aa17.28■□□□□ 0.36
APOE-205ENST00000485628 NFE2L3Q9Y4A8 694 aa17.28■□□□□ 0.36
APOE-205ENST00000485628 INPPL1O15357 1258 aa17.27■□□□□ 0.36
APOE-205ENST00000485628 ZSCAN20P17040 1043 aaPredicted RBP17.27■□□□□ 0.36
APOE-205ENST00000485628 ENPEPQ07075 957 aa17.27■□□□□ 0.36
APOE-205ENST00000485628 SLC24A5Q71RS6 500 aa17.27■□□□□ 0.36
APOE-205ENST00000485628 TMEM192Q8IY95 271 aa17.27■□□□□ 0.36
APOE-205ENST00000485628 RPUSD2Q8IZ73 545 aaKnown RBP17.27■□□□□ 0.36
APOE-205ENST00000485628 GPD1LQ8N335 351 aa17.27■□□□□ 0.36
APOE-205ENST00000485628 CEP120Q8N960 986 aa17.27■□□□□ 0.36
APOE-205ENST00000485628 NOC3LQ8WTT2 800 aaKnown RBP17.27■□□□□ 0.36
APOE-205ENST00000485628 ADPGKQ9BRR6 497 aa17.27■□□□□ 0.36
APOE-205ENST00000485628 MSTO1Q9BUK6 570 aa17.27■□□□□ 0.36
APOE-205ENST00000485628 C1orf112Q9NSG2 853 aa17.27■□□□□ 0.36
APOE-205ENST00000485628 SAMSN1Q9NSI8 373 aaKnown RBP17.27■□□□□ 0.36
APOE-205ENST00000485628 PCDH10Q9P2E7 1040 aa17.27■□□□□ 0.36
APOE-205ENST00000485628 IPPQ9Y573 584 aa17.27■□□□□ 0.36
APOE-205ENST00000485628 PCDHB2Q9Y5E7 798 aa17.27■□□□□ 0.36
APOE-205ENST00000485628 TRIP11Q15643 1979 aa17.27■□□□□ 0.36
APOE-205ENST00000485628 CITO14578 2027 aa17.26■□□□□ 0.35
APOE-205ENST00000485628 LRRC10BA6NIK2 292 aa17.26■□□□□ 0.35
APOE-205ENST00000485628 CETN3O15182 167 aa17.26■□□□□ 0.35
APOE-205ENST00000485628 SLC16A3O15427 465 aaKnown RBP17.26■□□□□ 0.35
APOE-205ENST00000485628 NPTXRO95502 500 aa17.26■□□□□ 0.35
APOE-205ENST00000485628 TNFSF9P41273 254 aa17.26■□□□□ 0.35
APOE-205ENST00000485628 RAB27AP51159 221 aa17.26■□□□□ 0.35
APOE-205ENST00000485628 EPHB4P54760 987 aa17.26■□□□□ 0.35
APOE-205ENST00000485628 CLDN10P78369 228 aa17.26■□□□□ 0.35
APOE-205ENST00000485628 PPIGQ13427 754 aaKnown RBP eCLIP17.26■□□□□ 0.35
APOE-205ENST00000485628 KYAT1Q16773 422 aa17.26■□□□□ 0.35
APOE-205ENST00000485628 APTXQ7Z2E3 356 aaKnown RBP17.26■□□□□ 0.35
APOE-205ENST00000485628 DEFB128Q7Z7B8 93 aa17.26■□□□□ 0.35
APOE-205ENST00000485628 ZBTB33Q86T24 672 aa17.26■□□□□ 0.35
APOE-205ENST00000485628 LUZP1Q86V48 1076 aa17.26■□□□□ 0.35
APOE-205ENST00000485628 ECHDC2Q86YB7 292 aa17.26■□□□□ 0.35
APOE-205ENST00000485628 CBWD2Q8IUF1 395 aa17.26■□□□□ 0.35
APOE-205ENST00000485628 AOPEPQ8N6M6 819 aa17.26■□□□□ 0.35
APOE-205ENST00000485628 PLEKHO2Q8TD55 490 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms