RNA–Protein interactions for RNA: ENST00000485607.1

CLRN1-206, Transcript of clarin 1, humanhuman

TSL 1 (best)

Gene CLRN1, Length 704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-206ENST00000485607 SCG2P13521 617 aa8.41□□□□□ -1.06
CLRN1-206ENST00000485607 GLB1P16278 677 aa8.41□□□□□ -1.06
CLRN1-206ENST00000485607 IBSPP21815 317 aaPredicted RBP8.41□□□□□ -1.06
CLRN1-206ENST00000485607 GRNP28799 593 aaKnown RBP8.41□□□□□ -1.06
CLRN1-206ENST00000485607 HSPA4P34932 840 aa8.41□□□□□ -1.06
CLRN1-206ENST00000485607 ZNF76P36508 570 aa8.41□□□□□ -1.06
CLRN1-206ENST00000485607 BMPR1AP36894 532 aa8.41□□□□□ -1.06
CLRN1-206ENST00000485607 RCAN1P53805 252 aa8.41□□□□□ -1.06
CLRN1-206ENST00000485607 CAMK1Q14012 370 aa8.41□□□□□ -1.06
CLRN1-206ENST00000485607 BTG3Q14201 252 aaPredicted RBP8.41□□□□□ -1.06
CLRN1-206ENST00000485607 KRT32Q14532 448 aa8.41□□□□□ -1.06
CLRN1-206ENST00000485607 PTPROQ16827 1216 aa8.41□□□□□ -1.06
CLRN1-206ENST00000485607 MTHFD1LQ6UB35 978 aa8.41□□□□□ -1.06
CLRN1-206ENST00000485607 PLA2G4DQ86XP0 818 aa8.41□□□□□ -1.06
CLRN1-206ENST00000485607 FAM178BQ8IXR5 827 aa8.41□□□□□ -1.06
CLRN1-206ENST00000485607 ZNF713Q8N859 430 aaPredicted RBP8.41□□□□□ -1.06
CLRN1-206ENST00000485607 NEK9Q8TD19 979 aa8.41□□□□□ -1.06
CLRN1-206ENST00000485607 ATP8B4Q8TF62 1192 aa8.41□□□□□ -1.06
CLRN1-206ENST00000485607 TMEM40Q8WWA1 233 aa8.41□□□□□ -1.06
CLRN1-206ENST00000485607 ZNF689Q96CS4 500 aaPredicted RBP8.41□□□□□ -1.06
CLRN1-206ENST00000485607 PPP1R16BQ96T49 567 aa8.41□□□□□ -1.06
CLRN1-206ENST00000485607 CELF4Q9BZC1 486 aaKnown RBP8.41□□□□□ -1.06
CLRN1-206ENST00000485607 MRPL42Q9Y6G3 142 aaKnown RBP8.41□□□□□ -1.06
CLRN1-206ENST00000485607 C5orf42Q9H799 3197 aa8.4□□□□□ -1.06
CLRN1-206ENST00000485607 SMIM35A0A1B0GVV1 85 aa8.4□□□□□ -1.06
CLRN1-206ENST00000485607 ESYT2A0FGR8 921 aa8.4□□□□□ -1.06
CLRN1-206ENST00000485607 J3QW42 95 aa8.4□□□□□ -1.06
CLRN1-206ENST00000485607 IPO5O00410 1097 aaKnown RBP8.4□□□□□ -1.06
CLRN1-206ENST00000485607 EDIL3O43854 480 aa8.4□□□□□ -1.06
CLRN1-206ENST00000485607 MICAL2O94851 1124 aa8.4□□□□□ -1.06
CLRN1-206ENST00000485607 GHRHP01286 108 aa8.4□□□□□ -1.06
CLRN1-206ENST00000485607 CYP3A4P08684 503 aa8.4□□□□□ -1.06
CLRN1-206ENST00000485607 HMGB1P09429 215 aaKnown RBP8.4□□□□□ -1.06
CLRN1-206ENST00000485607 RPS6KB1P23443 525 aa8.4□□□□□ -1.06
CLRN1-206ENST00000485607 DNAJB1P25685 340 aa8.4□□□□□ -1.06
CLRN1-206ENST00000485607 KLRC1P26715 233 aa8.4□□□□□ -1.06
CLRN1-206ENST00000485607 GTF2F1P35269 517 aaKnown RBP eCLIP8.4□□□□□ -1.06
CLRN1-206ENST00000485607 LTBRP36941 435 aa8.4□□□□□ -1.06
CLRN1-206ENST00000485607 FGD1P98174 961 aa8.4□□□□□ -1.06
CLRN1-206ENST00000485607 DLX2Q07687 328 aaPredicted RBP8.4□□□□□ -1.06
CLRN1-206ENST00000485607 HYAL1Q12794 435 aa8.4□□□□□ -1.06
CLRN1-206ENST00000485607 PAK2Q13177 524 aa8.4□□□□□ -1.06
CLRN1-206ENST00000485607 CLUL1Q15846 466 aa8.4□□□□□ -1.06
CLRN1-206ENST00000485607 NTRK3Q16288 839 aa8.4□□□□□ -1.06
CLRN1-206ENST00000485607 PAN2Q504Q3 1202 aaKnown RBP8.4□□□□□ -1.06
CLRN1-206ENST00000485607 SWSAP1Q6NVH7 229 aa8.4□□□□□ -1.06
CLRN1-206ENST00000485607 EP400NLQ6ZTU2 488 aa8.4□□□□□ -1.06
CLRN1-206ENST00000485607 NIPA1Q7RTP0 329 aa8.4□□□□□ -1.06
CLRN1-206ENST00000485607 TEX2Q8IWB9 1127 aa8.4□□□□□ -1.06
CLRN1-206ENST00000485607 KIAA0319LQ8IZA0 1049 aa8.4□□□□□ -1.06
CLRN1-206ENST00000485607 REXO1Q8N1G1 1221 aaKnown RBP8.4□□□□□ -1.06
CLRN1-206ENST00000485607 IL22RA1Q8N6P7 574 aa8.4□□□□□ -1.06
CLRN1-206ENST00000485607 CLP1Q92989 425 aaKnown RBP8.4□□□□□ -1.06
CLRN1-206ENST00000485607 LENG9Q96B70 501 aa8.4□□□□□ -1.06
CLRN1-206ENST00000485607 PLD4Q96BZ4 506 aa8.4□□□□□ -1.06
CLRN1-206ENST00000485607 PABPC5Q96DU9 382 aaKnown RBP8.4□□□□□ -1.06
CLRN1-206ENST00000485607 LRFN3Q9BTN0 628 aa8.4□□□□□ -1.06
CLRN1-206ENST00000485607 C1QTNF1Q9BXJ1 281 aa8.4□□□□□ -1.06
CLRN1-206ENST00000485607 ZMYND12Q9H0C1 365 aa8.4□□□□□ -1.06
CLRN1-206ENST00000485607 RBSNQ9H1K0 784 aa8.4□□□□□ -1.06
CLRN1-206ENST00000485607 NSUN3Q9H649 340 aaKnown RBP8.4□□□□□ -1.06
CLRN1-206ENST00000485607 NCOA5Q9HCD5 579 aaKnown RBP8.4□□□□□ -1.06
CLRN1-206ENST00000485607 ALG13Q9NP73 1137 aaKnown RBP8.4□□□□□ -1.06
CLRN1-206ENST00000485607 CLDND1Q9NY35 253 aa8.4□□□□□ -1.06
CLRN1-206ENST00000485607 TFIP11Q9UBB9 837 aaKnown RBP8.4□□□□□ -1.06
CLRN1-206ENST00000485607 GINS2Q9Y248 185 aa8.4□□□□□ -1.06
CLRN1-206ENST00000485607 NOC2LQ9Y3T9 749 aaKnown RBP8.4□□□□□ -1.06
CLRN1-206ENST00000485607 PCDHGC5Q9Y5F6 944 aa8.4□□□□□ -1.06
CLRN1-206ENST00000485607 ATG2AQ2TAZ0 1938 aa8.39□□□□□ -1.07
CLRN1-206ENST00000485607 KDM3AQ9Y4C1 1321 aa8.39□□□□□ -1.07
CLRN1-206ENST00000485607 F8W735 103 aaPredicted RBP8.39□□□□□ -1.07
CLRN1-206ENST00000485607 LINC01565O15544 149 aa8.39□□□□□ -1.07
CLRN1-206ENST00000485607 PRPF3O43395 683 aaKnown RBP8.39□□□□□ -1.07
CLRN1-206ENST00000485607 TBX10O75333 385 aa8.39□□□□□ -1.07
CLRN1-206ENST00000485607 C22orf31O95567 290 aa8.39□□□□□ -1.07
CLRN1-206ENST00000485607 RB1P06400 928 aa8.39□□□□□ -1.07
CLRN1-206ENST00000485607 SLC26A2P50443 739 aa8.39□□□□□ -1.07
CLRN1-206ENST00000485607 NRLP54845 237 aa8.39□□□□□ -1.07
CLRN1-206ENST00000485607 PRR16Q569H4 304 aa8.39□□□□□ -1.07
CLRN1-206ENST00000485607 BLOC1S2Q6QNY1 142 aa8.39□□□□□ -1.07
CLRN1-206ENST00000485607 TRMT1LQ7Z2T5 733 aaKnown RBP8.39□□□□□ -1.07
CLRN1-206ENST00000485607 NPAS4Q8IUM7 802 aa8.39□□□□□ -1.07
CLRN1-206ENST00000485607 GJD3Q8N144 294 aa8.39□□□□□ -1.07
CLRN1-206ENST00000485607 TMEM130Q8N3G9 435 aa8.39□□□□□ -1.07
CLRN1-206ENST00000485607 GJA10Q969M2 543 aa8.39□□□□□ -1.07
CLRN1-206ENST00000485607 ZNF577Q9BSK1 485 aa8.39□□□□□ -1.07
CLRN1-206ENST00000485607 C11orf84Q9BUA3 381 aaPredicted RBP8.39□□□□□ -1.07
CLRN1-206ENST00000485607 AGXT2Q9BYV1 514 aa8.39□□□□□ -1.07
CLRN1-206ENST00000485607 GLT8D2Q9H1C3 349 aa8.39□□□□□ -1.07
CLRN1-206ENST00000485607 ERVK-5Q9HDB9 667 aa8.39□□□□□ -1.07
CLRN1-206ENST00000485607 ZNF302Q9NR11 478 aa8.39□□□□□ -1.07
CLRN1-206ENST00000485607 VPS54Q9P1Q0 977 aa8.39□□□□□ -1.07
CLRN1-206ENST00000485607 PLAGL2Q9UPG8 496 aa8.39□□□□□ -1.07
CLRN1-206ENST00000485607 USP20Q9Y2K6 914 aa8.39□□□□□ -1.07
CLRN1-206ENST00000485607 SQORQ9Y6N5 450 aa8.39□□□□□ -1.07
CLRN1-206ENST00000485607 RALGAPA2Q2PPJ7 1873 aa8.38□□□□□ -1.07
CLRN1-206ENST00000485607 NLRC5Q86WI3 1866 aa8.38□□□□□ -1.07
CLRN1-206ENST00000485607 COL1A2P08123 1366 aa8.38□□□□□ -1.07
CLRN1-206ENST00000485607 CCDC196A0A1B0GTZ2 297 aa8.38□□□□□ -1.07
CLRN1-206ENST00000485607 M0QZ92 97 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms