RNA–Protein interactions for RNA: ENST00000485140.1

VPS50-217, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-217ENST00000485140 TMA7Q9Y2S6 64 aaKnown RBP4.9□□□□□ -1.63
VPS50-217ENST00000485140 PPP2R3BQ9Y5P8 575 aa4.9□□□□□ -1.63
VPS50-217ENST00000485140 MRPL42Q9Y6G3 142 aaKnown RBP4.9□□□□□ -1.63
VPS50-217ENST00000485140 TEX33O43247 280 aa4.89□□□□□ -1.63
VPS50-217ENST00000485140 FAM20BO75063 409 aa4.89□□□□□ -1.63
VPS50-217ENST00000485140 SNRPA1P09661 255 aaKnown RBP4.89□□□□□ -1.63
VPS50-217ENST00000485140 CLEC2LP0C7M8 214 aa4.89□□□□□ -1.63
VPS50-217ENST00000485140 MYCLP1P12525 358 aaPredicted RBP4.89□□□□□ -1.63
VPS50-217ENST00000485140 HK1P19367 917 aa4.89□□□□□ -1.63
VPS50-217ENST00000485140 HSD3B2P26439 372 aa4.89□□□□□ -1.63
VPS50-217ENST00000485140 FLT3LGP49771 235 aa4.89□□□□□ -1.63
VPS50-217ENST00000485140 UBE3CQ15386 1083 aa4.89□□□□□ -1.63
VPS50-217ENST00000485140 UGT8Q16880 541 aa4.89□□□□□ -1.63
VPS50-217ENST00000485140 SUPT20HQ8NEM7 779 aa4.89□□□□□ -1.63
VPS50-217ENST00000485140 NELL1Q92832 810 aa4.89□□□□□ -1.63
VPS50-217ENST00000485140 PGBD4Q96DM1 585 aa4.89□□□□□ -1.63
VPS50-217ENST00000485140 COQ10AQ96MF6 247 aa4.89□□□□□ -1.63
VPS50-217ENST00000485140 FDXACB1Q9BRP7 624 aaPredicted RBP4.89□□□□□ -1.63
VPS50-217ENST00000485140 HS3ST4Q9Y661 456 aa4.89□□□□□ -1.63
VPS50-217ENST00000485140 ENPP1P22413 925 aa4.88□□□□□ -1.63
VPS50-217ENST00000485140 SEPT7Q16181 437 aaKnown RBP4.88□□□□□ -1.63
VPS50-217ENST00000485140 CCDC62Q6P9F0 684 aa4.88□□□□□ -1.63
VPS50-217ENST00000485140 DRC7Q8IY82 874 aa4.88□□□□□ -1.63
VPS50-217ENST00000485140 FATE1Q969F0 183 aa4.88□□□□□ -1.63
VPS50-217ENST00000485140 KCTD10Q9H3F6 313 aa4.88□□□□□ -1.63
VPS50-217ENST00000485140 BCO1Q9HAY6 547 aa4.88□□□□□ -1.63
VPS50-217ENST00000485140 GPRC5DQ9NZD1 345 aa4.88□□□□□ -1.63
VPS50-217ENST00000485140 EVLQ9UI08 416 aaPredicted RBP4.88□□□□□ -1.63
VPS50-217ENST00000485140 TMPRSS11EQ9UL52 423 aa4.88□□□□□ -1.63
VPS50-217ENST00000485140 A0A087X0B3 334 aa4.87□□□□□ -1.63
VPS50-217ENST00000485140 TMEM200CA6NKL6 621 aa4.87□□□□□ -1.63
VPS50-217ENST00000485140 TBKBP1A7MCY6 615 aa4.87□□□□□ -1.63
VPS50-217ENST00000485140 RPS6KA4O75676 772 aa4.87□□□□□ -1.63
VPS50-217ENST00000485140 TGM1P22735 817 aa4.87□□□□□ -1.63
VPS50-217ENST00000485140 SLC5A3P53794 718 aa4.87□□□□□ -1.63
VPS50-217ENST00000485140 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.87□□□□□ -1.63
VPS50-217ENST00000485140 CT47A1Q5JQC4 288 aaPredicted RBP4.87□□□□□ -1.63
VPS50-217ENST00000485140 RRP12Q5JTH9 1297 aaKnown RBP4.87□□□□□ -1.63
VPS50-217ENST00000485140 ABHD17BQ5VST6 288 aa4.87□□□□□ -1.63
VPS50-217ENST00000485140 BTNL9Q6UXG8 535 aa4.87□□□□□ -1.63
VPS50-217ENST00000485140 JAZF1Q86VZ6 243 aa4.87□□□□□ -1.63
VPS50-217ENST00000485140 ZNF575Q86XF7 245 aa4.87□□□□□ -1.63
VPS50-217ENST00000485140 SLC41A1Q8IVJ1 513 aa4.87□□□□□ -1.63
VPS50-217ENST00000485140 ARHGEF19Q8IW93 802 aa4.87□□□□□ -1.63
VPS50-217ENST00000485140 RPUSD2Q8IZ73 545 aaKnown RBP4.87□□□□□ -1.63
VPS50-217ENST00000485140 CHAC2Q8WUX2 184 aa4.87□□□□□ -1.63
VPS50-217ENST00000485140 AUTS2Q8WXX7 1259 aa4.87□□□□□ -1.63
VPS50-217ENST00000485140 SSH1Q8WYL5 1049 aa4.87□□□□□ -1.63
VPS50-217ENST00000485140 TFAP2CQ92754 450 aa4.87□□□□□ -1.63
VPS50-217ENST00000485140 ANO3Q9BYT9 981 aa4.87□□□□□ -1.63
VPS50-217ENST00000485140 MOCS1Q9NZB8 636 aa4.87□□□□□ -1.63
VPS50-217ENST00000485140 TRPM5Q9NZQ8 1165 aa4.87□□□□□ -1.63
VPS50-217ENST00000485140 ITGA10O75578 1167 aa4.86□□□□□ -1.63
VPS50-217ENST00000485140 LMNAP02545 664 aaKnown RBP4.86□□□□□ -1.63
VPS50-217ENST00000485140 IL2RBP14784 551 aa4.86□□□□□ -1.63
VPS50-217ENST00000485140 CTSSP25774 331 aa4.86□□□□□ -1.63
VPS50-217ENST00000485140 ECHS1P30084 290 aa4.86□□□□□ -1.63
VPS50-217ENST00000485140 LGALS4P56470 323 aa4.86□□□□□ -1.63
VPS50-217ENST00000485140 NANOS3P60323 173 aaKnown RBP4.86□□□□□ -1.63
VPS50-217ENST00000485140 SP140Q13342 867 aa4.86□□□□□ -1.63
VPS50-217ENST00000485140 ATP2B3Q16720 1220 aa4.86□□□□□ -1.63
VPS50-217ENST00000485140 C21orf62-AS1Q17RA5 79 aa4.86□□□□□ -1.63
VPS50-217ENST00000485140 BMT2Q1RMZ1 405 aa4.86□□□□□ -1.63
VPS50-217ENST00000485140 FAM214AQ32MH5 1076 aa4.86□□□□□ -1.63
VPS50-217ENST00000485140 SPDYE7PQ495Y7 208 aa4.86□□□□□ -1.63
VPS50-217ENST00000485140 FAM47AQ5JRC9 791 aa4.86□□□□□ -1.63
VPS50-217ENST00000485140 PCSK4Q6UW60 755 aa4.86□□□□□ -1.63
VPS50-217ENST00000485140 ZNF627Q7L945 461 aa4.86□□□□□ -1.63
VPS50-217ENST00000485140 LCORLQ8N3X6 602 aa4.86□□□□□ -1.63
VPS50-217ENST00000485140 OR10H5Q8NGA6 315 aa4.86□□□□□ -1.63
VPS50-217ENST00000485140 CYFIP2Q96F07 1278 aa4.86□□□□□ -1.63
VPS50-217ENST00000485140 AGAP2Q99490 1192 aa4.86□□□□□ -1.63
VPS50-217ENST00000485140 LSM14BQ9BX40 385 aaKnown RBP4.86□□□□□ -1.63
VPS50-217ENST00000485140 SPON1Q9HCB6 807 aa4.86□□□□□ -1.63
VPS50-217ENST00000485140 AKIP1Q9NQ31 210 aa4.86□□□□□ -1.63
VPS50-217ENST00000485140 FAM30AQ9NZY2 134 aa4.86□□□□□ -1.63
VPS50-217ENST00000485140 POGKQ9P215 609 aa4.86□□□□□ -1.63
VPS50-217ENST00000485140 STC2O76061 302 aa4.85□□□□□ -1.63
VPS50-217ENST00000485140 ENDOD1O94919 500 aa4.85□□□□□ -1.63
VPS50-217ENST00000485140 HKR1P10072 659 aa4.85□□□□□ -1.63
VPS50-217ENST00000485140 GUCY1B3Q02153 619 aa4.85□□□□□ -1.63
VPS50-217ENST00000485140 MST1LQ2TV78 715 aa4.85□□□□□ -1.63
VPS50-217ENST00000485140 PITRM1Q5JRX3 1037 aa4.85□□□□□ -1.63
VPS50-217ENST00000485140 STRIP1Q5VSL9 837 aa4.85□□□□□ -1.63
VPS50-217ENST00000485140 MBNL2Q5VZF2 373 aaKnown RBP4.85□□□□□ -1.63
VPS50-217ENST00000485140 HDGFL2Q7Z4V5 671 aaPredicted RBP4.85□□□□□ -1.63
VPS50-217ENST00000485140 MSL3Q8N5Y2 521 aaKnown RBP4.85□□□□□ -1.63
VPS50-217ENST00000485140 OR7D4Q8NG98 312 aa4.85□□□□□ -1.63
VPS50-217ENST00000485140 CPEB1Q9BZB8 566 aaKnown RBP4.85□□□□□ -1.63
VPS50-217ENST00000485140 GREM2Q9H772 168 aa4.85□□□□□ -1.63
VPS50-217ENST00000485140 ATP11BQ9Y2G3 1177 aa4.85□□□□□ -1.63
VPS50-217ENST00000485140 TBX22Q9Y458 520 aa4.85□□□□□ -1.63
VPS50-217ENST00000485140 PRKAB1Q9Y478 270 aa4.85□□□□□ -1.63
VPS50-217ENST00000485140 CHST2Q9Y4C5 530 aa4.85□□□□□ -1.63
VPS50-217ENST00000485140 FPGT-TNNI3KV9GXZ4 949 aa4.85□□□□□ -1.63
VPS50-217ENST00000485140 TLDC2A0PJX2 215 aa4.84□□□□□ -1.63
VPS50-217ENST00000485140 FAM171A2A8MVW0 826 aa4.84□□□□□ -1.63
VPS50-217ENST00000485140 ZSCAN20P17040 1043 aaPredicted RBP4.84□□□□□ -1.63
VPS50-217ENST00000485140 FBLP22087 321 aaKnown RBP4.84□□□□□ -1.63
VPS50-217ENST00000485140 APOBEC3AP31941 199 aaPredicted RBP4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms