RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 KCNJ14Q9UNX9 436 aa14.5□□□□□ -0.09
HDAC6-227ENST00000485102 ZNF292O60281 2723 aa14.5□□□□□ -0.09
HDAC6-227ENST00000485102 TDRD15B5MCY1 1934 aaKnown RBP14.5□□□□□ -0.09
HDAC6-227ENST00000485102 OTOGLQ3ZCN5 2332 aa14.49□□□□□ -0.09
HDAC6-227ENST00000485102 CACNA1IQ9P0X4 2223 aa14.49□□□□□ -0.09
HDAC6-227ENST00000485102 C2CD2LO14523 706 aa14.49□□□□□ -0.09
HDAC6-227ENST00000485102 CCNT1O60563 726 aaKnown RBP14.49□□□□□ -0.09
HDAC6-227ENST00000485102 SRFP11831 508 aa14.49□□□□□ -0.09
HDAC6-227ENST00000485102 OR1G1P47890 313 aa14.49□□□□□ -0.09
HDAC6-227ENST00000485102 TFDP1Q14186 410 aa14.49□□□□□ -0.09
HDAC6-227ENST00000485102 PHLDB3Q6NSJ2 640 aa14.49□□□□□ -0.09
HDAC6-227ENST00000485102 HACE1Q8IYU2 909 aa14.49□□□□□ -0.09
HDAC6-227ENST00000485102 NT5C3AQ9H0P0 336 aa14.49□□□□□ -0.09
HDAC6-227ENST00000485102 ANKEF1Q9NU02 776 aa14.49□□□□□ -0.09
HDAC6-227ENST00000485102 DAXXQ9UER7 740 aaPredicted RBP14.49□□□□□ -0.09
HDAC6-227ENST00000485102 PRG3Q9Y2Y8 225 aaPredicted RBP14.49□□□□□ -0.09
HDAC6-227ENST00000485102 ZFP37Q9Y6Q3 630 aaPredicted RBP14.49□□□□□ -0.09
HDAC6-227ENST00000485102 A0A1B0GUA9 196 aa14.48□□□□□ -0.09
HDAC6-227ENST00000485102 KRBA1A5PL33 1030 aa14.48□□□□□ -0.09
HDAC6-227ENST00000485102 ANHXE9PGG2 379 aa14.48□□□□□ -0.09
HDAC6-227ENST00000485102 ZBTB39O15060 712 aa14.48□□□□□ -0.09
HDAC6-227ENST00000485102 RFPL2O75678 378 aa14.48□□□□□ -0.09
HDAC6-227ENST00000485102 DGAT1O75907 488 aa14.48□□□□□ -0.09
HDAC6-227ENST00000485102 BAG4O95429 457 aaKnown RBP14.48□□□□□ -0.09
HDAC6-227ENST00000485102 XRCC6P12956 609 aaKnown RBP eCLIP14.48□□□□□ -0.09
HDAC6-227ENST00000485102 GBP2P32456 591 aaPredicted RBP14.48□□□□□ -0.09
HDAC6-227ENST00000485102 ARL2P36404 184 aa14.48□□□□□ -0.09
HDAC6-227ENST00000485102 MLH1P40692 756 aa14.48□□□□□ -0.09
HDAC6-227ENST00000485102 SCNN1GP51170 649 aa14.48□□□□□ -0.09
HDAC6-227ENST00000485102 CREMQ03060 361 aa14.48□□□□□ -0.09
HDAC6-227ENST00000485102 MBTD1Q05BQ5 628 aa14.48□□□□□ -0.09
HDAC6-227ENST00000485102 USP41Q3LFD5 358 aa14.48□□□□□ -0.09
HDAC6-227ENST00000485102 SMG7Q92540 1137 aaKnown RBP14.48□□□□□ -0.09
HDAC6-227ENST00000485102 DYDC2Q96IM9 177 aa14.48□□□□□ -0.09
HDAC6-227ENST00000485102 ZFP42Q96MM3 310 aa14.48□□□□□ -0.09
HDAC6-227ENST00000485102 MYADMQ96S97 322 aa14.48□□□□□ -0.09
HDAC6-227ENST00000485102 PRKD2Q9BZL6 878 aa14.48□□□□□ -0.09
HDAC6-227ENST00000485102 GTF3C3Q9Y5Q9 886 aa14.48□□□□□ -0.09
HDAC6-227ENST00000485102 ARID2Q68CP9 1835 aa14.48□□□□□ -0.09
HDAC6-227ENST00000485102 DOCK6Q96HP0 2047 aa14.48□□□□□ -0.09
HDAC6-227ENST00000485102 INO80B-WBP1J3KQ70 363 aa14.47□□□□□ -0.09
HDAC6-227ENST00000485102 TGM5O43548 720 aa14.47□□□□□ -0.09
HDAC6-227ENST00000485102 NARSO43776 548 aaKnown RBP14.47□□□□□ -0.09
HDAC6-227ENST00000485102 MARCH6O60337 910 aa14.47□□□□□ -0.09
HDAC6-227ENST00000485102 LAMP2P13473 410 aa14.47□□□□□ -0.09
HDAC6-227ENST00000485102 ARF4P18085 180 aaPredicted RBP14.47□□□□□ -0.09
HDAC6-227ENST00000485102 SCRN1Q12765 414 aa14.47□□□□□ -0.09
HDAC6-227ENST00000485102 GRIK3Q13003 919 aa14.47□□□□□ -0.09
HDAC6-227ENST00000485102 CTTNQ14247 550 aaKnown RBP14.47□□□□□ -0.09
HDAC6-227ENST00000485102 FUT10Q6P4F1 479 aa14.47□□□□□ -0.09
HDAC6-227ENST00000485102 PIK3AP1Q6ZUJ8 805 aa14.47□□□□□ -0.09
HDAC6-227ENST00000485102 POTEDQ86YR6 584 aa14.47□□□□□ -0.09
HDAC6-227ENST00000485102 ADSSL1Q8N142 457 aa14.47□□□□□ -0.09
HDAC6-227ENST00000485102 RSAD2Q8WXG1 361 aa14.47□□□□□ -0.09
HDAC6-227ENST00000485102 GPR62Q9BZJ7 368 aa14.47□□□□□ -0.09
HDAC6-227ENST00000485102 SLC2A4RGQ9NR83 387 aa14.47□□□□□ -0.09
HDAC6-227ENST00000485102 PDRG1Q9NUG6 133 aa14.47□□□□□ -0.09
HDAC6-227ENST00000485102 ADAM28Q9UKQ2 775 aa14.47□□□□□ -0.09
HDAC6-227ENST00000485102 HES2Q9Y543 173 aa14.47□□□□□ -0.09
HDAC6-227ENST00000485102 WDR87Q6ZQQ6 2873 aa14.47□□□□□ -0.09
HDAC6-227ENST00000485102 FANCMQ8IYD8 2048 aa14.46□□□□□ -0.09
HDAC6-227ENST00000485102 PFKFB2O60825 505 aa14.46□□□□□ -0.09
HDAC6-227ENST00000485102 CYP4A11Q02928 519 aa14.46□□□□□ -0.09
HDAC6-227ENST00000485102 STK3Q13188 491 aa14.46□□□□□ -0.09
HDAC6-227ENST00000485102 CAPSQ13938 189 aa14.46□□□□□ -0.09
HDAC6-227ENST00000485102 EARS2Q5JPH6 523 aaKnown RBP14.46□□□□□ -0.09
HDAC6-227ENST00000485102 NCAPH2Q6IBW4 605 aa14.46□□□□□ -0.09
HDAC6-227ENST00000485102 SLC27A1Q6PCB7 646 aa14.46□□□□□ -0.09
HDAC6-227ENST00000485102 TPH2Q8IWU9 490 aa14.46□□□□□ -0.09
HDAC6-227ENST00000485102 OXER1Q8TDS5 423 aa14.46□□□□□ -0.09
HDAC6-227ENST00000485102 CPB2Q96IY4 423 aa14.46□□□□□ -0.09
HDAC6-227ENST00000485102 PRIMPOLQ96LW4 560 aa14.46□□□□□ -0.09
HDAC6-227ENST00000485102 EIF2AK1Q9BQI3 630 aaKnown RBP14.46□□□□□ -0.09
HDAC6-227ENST00000485102 LARP6Q9BRS8 491 aaKnown RBP14.46□□□□□ -0.09
HDAC6-227ENST00000485102 TRIM6Q9C030 488 aaPredicted RBP14.46□□□□□ -0.09
HDAC6-227ENST00000485102 NXF3Q9H4D5 531 aaKnown RBP14.46□□□□□ -0.09
HDAC6-227ENST00000485102 BMP2KQ9NSY1 1161 aaPredicted RBP14.46□□□□□ -0.09
HDAC6-227ENST00000485102 DLGAP2Q9P1A6 1054 aa14.46□□□□□ -0.09
HDAC6-227ENST00000485102 PCDHA12Q9UN75 941 aa14.46□□□□□ -0.09
HDAC6-227ENST00000485102 CEP250Q9BV73 2442 aa14.46□□□□□ -0.09
HDAC6-227ENST00000485102 F8W810 466 aa14.45□□□□□ -0.1
HDAC6-227ENST00000485102 ZMYND10O75800 440 aa14.45□□□□□ -0.1
HDAC6-227ENST00000485102 CFHP08603 1231 aa14.45□□□□□ -0.1
HDAC6-227ENST00000485102 GLRA2P23416 452 aa14.45□□□□□ -0.1
HDAC6-227ENST00000485102 ID4P47928 161 aa14.45□□□□□ -0.1
HDAC6-227ENST00000485102 RARRES1P49788 294 aa14.45□□□□□ -0.1
HDAC6-227ENST00000485102 HTR4Q13639 388 aa14.45□□□□□ -0.1
HDAC6-227ENST00000485102 FAM187BQ17R55 369 aa14.45□□□□□ -0.1
HDAC6-227ENST00000485102 POTEGQ6S5H5 508 aa14.45□□□□□ -0.1
HDAC6-227ENST00000485102 PPP4R3CPQ6ZMV5 832 aa14.45□□□□□ -0.1
HDAC6-227ENST00000485102 PALB2Q86YC2 1186 aa14.45□□□□□ -0.1
HDAC6-227ENST00000485102 ASAP3Q8TDY4 903 aa14.45□□□□□ -0.1
HDAC6-227ENST00000485102 WASF1Q92558 559 aa14.45□□□□□ -0.1
HDAC6-227ENST00000485102 TNFRSF25Q93038 417 aa14.45□□□□□ -0.1
HDAC6-227ENST00000485102 PIDD1Q9HB75 910 aa14.45□□□□□ -0.1
HDAC6-227ENST00000485102 GPR179Q6PRD1 2367 aa14.44□□□□□ -0.1
HDAC6-227ENST00000485102 LMNAP02545 664 aaKnown RBP14.44□□□□□ -0.1
HDAC6-227ENST00000485102 HNRNPA1P09651 372 aaKnown RBP eCLIP14.44□□□□□ -0.1
HDAC6-227ENST00000485102 SPATA31D3P0C874 917 aa14.44□□□□□ -0.1
HDAC6-227ENST00000485102 HOXA9P31269 272 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms