RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 LLGL1Q15334 1064 aa5.85□□□□□ -1.47
CCDC39-205ENST00000485055 INTS11Q5TA45 600 aaKnown RBP5.85□□□□□ -1.47
CCDC39-205ENST00000485055 RNF20Q5VTR2 975 aa5.85□□□□□ -1.47
CCDC39-205ENST00000485055 RNF219Q5W0B1 726 aaPredicted RBP5.85□□□□□ -1.47
CCDC39-205ENST00000485055 HEATR4Q86WZ0 1026 aa5.85□□□□□ -1.47
CCDC39-205ENST00000485055 IQCA1Q86XH1 822 aa5.85□□□□□ -1.47
CCDC39-205ENST00000485055 MYLK4Q86YV6 388 aaPredicted RBP5.85□□□□□ -1.47
CCDC39-205ENST00000485055 CLEC10AQ8IUN9 316 aa5.85□□□□□ -1.47
CCDC39-205ENST00000485055 CBARPQ8N350 705 aaPredicted RBP5.85□□□□□ -1.47
CCDC39-205ENST00000485055 IGDCC4Q8TDY8 1250 aa5.85□□□□□ -1.47
CCDC39-205ENST00000485055 RSAD2Q8WXG1 361 aa5.85□□□□□ -1.47
CCDC39-205ENST00000485055 NT5C1AQ9BXI3 368 aa5.85□□□□□ -1.47
CCDC39-205ENST00000485055 AGXT2Q9BYV1 514 aa5.85□□□□□ -1.47
CCDC39-205ENST00000485055 MYLK2Q9H1R3 596 aa5.85□□□□□ -1.47
CCDC39-205ENST00000485055 ATP6V0A4Q9HBG4 840 aa5.85□□□□□ -1.47
CCDC39-205ENST00000485055 ZNF358Q9NW07 568 aa5.85□□□□□ -1.47
CCDC39-205ENST00000485055 SCHIP1Q9P0W5 487 aaPredicted RBP5.85□□□□□ -1.47
CCDC39-205ENST00000485055 ZSWIM5Q9P217 1185 aa5.85□□□□□ -1.47
CCDC39-205ENST00000485055 MAD2L2Q9UI95 211 aa5.85□□□□□ -1.47
CCDC39-205ENST00000485055 MRPL11Q9Y3B7 192 aaKnown RBP5.85□□□□□ -1.47
CCDC39-205ENST00000485055 FAM221AA4D161 298 aa5.85□□□□□ -1.47
CCDC39-205ENST00000485055 STXBP3O00186 592 aa5.85□□□□□ -1.47
CCDC39-205ENST00000485055 CALM1P0DP23 149 aa5.85□□□□□ -1.47
CCDC39-205ENST00000485055 CALM2P0DP24 149 aa5.85□□□□□ -1.47
CCDC39-205ENST00000485055 CALM3P0DP25 149 aa5.85□□□□□ -1.47
CCDC39-205ENST00000485055 PDE6CP51160 858 aa5.85□□□□□ -1.47
CCDC39-205ENST00000485055 MRPS35P82673 323 aaKnown RBP5.85□□□□□ -1.47
CCDC39-205ENST00000485055 ZNF252P-AS1Q0IIN9 211 aa5.85□□□□□ -1.47
CCDC39-205ENST00000485055 NECTIN1Q15223 517 aa5.85□□□□□ -1.47
CCDC39-205ENST00000485055 SEZ6Q53EL9 994 aa5.85□□□□□ -1.47
CCDC39-205ENST00000485055 SPATA1Q5VX52 437 aa5.85□□□□□ -1.47
CCDC39-205ENST00000485055 IRGCQ6NXR0 463 aa5.85□□□□□ -1.47
CCDC39-205ENST00000485055 CENPQQ7L2Z9 268 aaPredicted RBP5.85□□□□□ -1.47
CCDC39-205ENST00000485055 LRRC47Q8N1G4 583 aaKnown RBP5.85□□□□□ -1.47
CCDC39-205ENST00000485055 FBXO27Q8NI29 283 aa5.85□□□□□ -1.47
CCDC39-205ENST00000485055 PHOSPHO2Q8TCD6 241 aa5.85□□□□□ -1.47
CCDC39-205ENST00000485055 PTCD2Q8WV60 388 aaKnown RBP5.85□□□□□ -1.47
CCDC39-205ENST00000485055 RBM18Q96H35 190 aaKnown RBP5.85□□□□□ -1.47
CCDC39-205ENST00000485055 EXOC2Q96KP1 924 aa5.85□□□□□ -1.47
CCDC39-205ENST00000485055 TMEM74Q96NL1 305 aa5.85□□□□□ -1.47
CCDC39-205ENST00000485055 RAVER2Q9HCJ3 691 aaKnown RBP5.85□□□□□ -1.47
CCDC39-205ENST00000485055 FANCFQ9NPI8 374 aa5.85□□□□□ -1.47
CCDC39-205ENST00000485055 MYH7BA7E2Y1 1941 aa5.85□□□□□ -1.47
CCDC39-205ENST00000485055 COL4A4P53420 1690 aaPredicted RBP5.85□□□□□ -1.47
CCDC39-205ENST00000485055 TRIM43BA6NCK2 446 aa5.85□□□□□ -1.47
CCDC39-205ENST00000485055 NEMP1O14524 444 aa5.85□□□□□ -1.47
CCDC39-205ENST00000485055 ADCY6O43306 1168 aa5.85□□□□□ -1.47
CCDC39-205ENST00000485055 CNOT4O95628 575 aaKnown RBP5.85□□□□□ -1.47
CCDC39-205ENST00000485055 CD86P42081 329 aa5.85□□□□□ -1.47
CCDC39-205ENST00000485055 CPT1AP50416 773 aa5.85□□□□□ -1.47
CCDC39-205ENST00000485055 TROAPQ12815 778 aa5.85□□□□□ -1.47
CCDC39-205ENST00000485055 PPIGQ13427 754 aaKnown RBP eCLIP5.85□□□□□ -1.47
CCDC39-205ENST00000485055 PCBP2Q15366 365 aaKnown RBP eCLIP5.85□□□□□ -1.47
CCDC39-205ENST00000485055 SLC14A2Q15849 920 aa5.85□□□□□ -1.47
CCDC39-205ENST00000485055 ZYXQ15942 572 aaKnown RBP5.85□□□□□ -1.47
CCDC39-205ENST00000485055 MUM1L1Q5H9M0 696 aa5.85□□□□□ -1.47
CCDC39-205ENST00000485055 FAM47AQ5JRC9 791 aa5.85□□□□□ -1.47
CCDC39-205ENST00000485055 KLHL10Q6JEL2 608 aa5.85□□□□□ -1.47
CCDC39-205ENST00000485055 RUFY4Q6ZNE9 571 aa5.85□□□□□ -1.47
CCDC39-205ENST00000485055 TEX9Q8N6V9 391 aa5.85□□□□□ -1.47
CCDC39-205ENST00000485055 PDCD7Q8N8D1 485 aaKnown RBP5.85□□□□□ -1.47
CCDC39-205ENST00000485055 GOLM1Q8NBJ4 401 aa5.85□□□□□ -1.47
CCDC39-205ENST00000485055 TRIM43Q96BQ3 446 aaPredicted RBP5.85□□□□□ -1.47
CCDC39-205ENST00000485055 DDX11Q96FC9 970 aa5.85□□□□□ -1.47
CCDC39-205ENST00000485055 UBXN10Q96LJ8 280 aa5.85□□□□□ -1.47
CCDC39-205ENST00000485055 GPATCH1Q9BRR8 931 aaKnown RBP5.85□□□□□ -1.47
CCDC39-205ENST00000485055 LSG1Q9H089 658 aaKnown RBP5.85□□□□□ -1.47
CCDC39-205ENST00000485055 BRD9Q9H8M2 597 aa5.85□□□□□ -1.47
CCDC39-205ENST00000485055 TOPORSQ9NS56 1045 aaPredicted RBP5.85□□□□□ -1.47
CCDC39-205ENST00000485055 TRMT13Q9NUP7 481 aaKnown RBP5.85□□□□□ -1.47
CCDC39-205ENST00000485055 DNM3Q9UQ16 869 aa5.85□□□□□ -1.47
CCDC39-205ENST00000485055 TLR3O15455 904 aaKnown RBP5.84□□□□□ -1.47
CCDC39-205ENST00000485055 BRINP1O60477 761 aa5.84□□□□□ -1.47
CCDC39-205ENST00000485055 PEX10O60683 326 aa5.84□□□□□ -1.47
CCDC39-205ENST00000485055 FBXO21O94952 628 aa5.84□□□□□ -1.47
CCDC39-205ENST00000485055 CXCL10P02778 98 aa5.84□□□□□ -1.47
CCDC39-205ENST00000485055 PARP1P09874 1014 aaKnown RBP5.84□□□□□ -1.47
CCDC39-205ENST00000485055 FGFR4P22455 802 aa5.84□□□□□ -1.47
CCDC39-205ENST00000485055 GRK2P25098 689 aa5.84□□□□□ -1.47
CCDC39-205ENST00000485055 GNAQP50148 359 aa5.84□□□□□ -1.47
CCDC39-205ENST00000485055 KRT83P78385 493 aa5.84□□□□□ -1.47
CCDC39-205ENST00000485055 TNFAIP2Q03169 654 aa5.84□□□□□ -1.47
CCDC39-205ENST00000485055 CCDC15Q0P6D6 951 aa5.84□□□□□ -1.47
CCDC39-205ENST00000485055 ZNF460Q14592 562 aa5.84□□□□□ -1.47
CCDC39-205ENST00000485055 GRIN2CQ14957 1233 aa5.84□□□□□ -1.47
CCDC39-205ENST00000485055 CCDC85BQ15834 202 aaPredicted RBP5.84□□□□□ -1.47
CCDC39-205ENST00000485055 VWA3BQ502W6 1294 aa5.84□□□□□ -1.47
CCDC39-205ENST00000485055 YOD1Q5VVQ6 348 aaPredicted RBP5.84□□□□□ -1.47
CCDC39-205ENST00000485055 TRIM68Q6AZZ1 485 aa5.84□□□□□ -1.47
CCDC39-205ENST00000485055 PSRC1Q6PGN9 363 aaPredicted RBP5.84□□□□□ -1.47
CCDC39-205ENST00000485055 LYPD8Q6UX82 237 aa5.84□□□□□ -1.47
CCDC39-205ENST00000485055 CHRDL2Q6WN34 429 aa5.84□□□□□ -1.47
CCDC39-205ENST00000485055 NIPA1Q7RTP0 329 aa5.84□□□□□ -1.47
CCDC39-205ENST00000485055 CCDC144CPQ8IYA2 1237 aa5.84□□□□□ -1.47
CCDC39-205ENST00000485055 NEK9Q8TD19 979 aa5.84□□□□□ -1.47
CCDC39-205ENST00000485055 SCFD2Q8WU76 684 aa5.84□□□□□ -1.47
CCDC39-205ENST00000485055 CCDC74AQ96AQ1 378 aa5.84□□□□□ -1.47
CCDC39-205ENST00000485055 VWCEQ96DN2 955 aa5.84□□□□□ -1.47
CCDC39-205ENST00000485055 NUP88Q99567 741 aaPredicted RBP5.84□□□□□ -1.47
CCDC39-205ENST00000485055 RSRP1Q9BUV0 290 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms