RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 EFHBQ8N7U6 833 aa13.53□□□□□ -0.24
MSH5-216ENST00000484309 SYT2Q8N9I0 419 aaPredicted RBP13.53□□□□□ -0.24
MSH5-216ENST00000484309 VN1R2Q8NFZ6 395 aa13.53□□□□□ -0.24
MSH5-216ENST00000484309 EPSTI1Q96J88 318 aa13.53□□□□□ -0.24
MSH5-216ENST00000484309 CLIC6Q96NY7 704 aa13.53□□□□□ -0.24
MSH5-216ENST00000484309 VN1R3Q9BXE9 311 aa13.53□□□□□ -0.24
MSH5-216ENST00000484309 CXCL16Q9H2A7 254 aa13.53□□□□□ -0.24
MSH5-216ENST00000484309 UBN1Q9NPG3 1134 aa13.53□□□□□ -0.24
MSH5-216ENST00000484309 KMT5AQ9NQR1 393 aa13.53□□□□□ -0.24
MSH5-216ENST00000484309 BLOC1S4Q9NUP1 217 aa13.53□□□□□ -0.24
MSH5-216ENST00000484309 SNTG2Q9NY99 539 aa13.53□□□□□ -0.24
MSH5-216ENST00000484309 CACNG4Q9UBN1 327 aa13.53□□□□□ -0.24
MSH5-216ENST00000484309 FBXO2Q9UK22 296 aaPredicted RBP13.53□□□□□ -0.24
MSH5-216ENST00000484309 GDAQ9Y2T3 454 aa13.53□□□□□ -0.24
MSH5-216ENST00000484309 PHLPP2Q6ZVD8 1323 aa13.53□□□□□ -0.24
MSH5-216ENST00000484309 VWA8A3KMH1 1905 aa13.52□□□□□ -0.24
MSH5-216ENST00000484309 TCHHQ07283 1943 aa13.52□□□□□ -0.24
MSH5-216ENST00000484309 F8W810 466 aa13.52□□□□□ -0.25
MSH5-216ENST00000484309 TNFRSF10AO00220 468 aa13.52□□□□□ -0.25
MSH5-216ENST00000484309 NRP1O14786 923 aa13.52□□□□□ -0.25
MSH5-216ENST00000484309 NCK2O43639 380 aa13.52□□□□□ -0.25
MSH5-216ENST00000484309 GUCY2CP25092 1073 aa13.52□□□□□ -0.25
MSH5-216ENST00000484309 EFNA5P52803 228 aa13.52□□□□□ -0.25
MSH5-216ENST00000484309 SMC1AQ14683 1233 aaKnown RBP13.52□□□□□ -0.25
MSH5-216ENST00000484309 DUSP6Q16828 381 aa13.52□□□□□ -0.25
MSH5-216ENST00000484309 FOXD4L6Q3SYB3 417 aaPredicted RBP13.52□□□□□ -0.25
MSH5-216ENST00000484309 ARSHQ5FYA8 562 aa13.52□□□□□ -0.25
MSH5-216ENST00000484309 ATF7IP2Q5U623 682 aa13.52□□□□□ -0.25
MSH5-216ENST00000484309 FOXD4L3Q6VB84 417 aaPredicted RBP13.52□□□□□ -0.25
MSH5-216ENST00000484309 TAS1R3Q7RTX0 852 aa13.52□□□□□ -0.25
MSH5-216ENST00000484309 COLGALT2Q8IYK4 626 aa13.52□□□□□ -0.25
MSH5-216ENST00000484309 RSPH1Q8WYR4 309 aa13.52□□□□□ -0.25
MSH5-216ENST00000484309 RABGGTAQ92696 567 aa13.52□□□□□ -0.25
MSH5-216ENST00000484309 RPS6KC1Q96S38 1066 aa13.52□□□□□ -0.25
MSH5-216ENST00000484309 ADPGKQ9BRR6 497 aa13.52□□□□□ -0.25
MSH5-216ENST00000484309 ZBP1Q9H171 429 aa13.52□□□□□ -0.25
MSH5-216ENST00000484309 CLEC1BQ9P126 229 aa13.52□□□□□ -0.25
MSH5-216ENST00000484309 KANSL3Q9P2N6 904 aa13.52□□□□□ -0.25
MSH5-216ENST00000484309 FAN1Q9Y2M0 1017 aa13.52□□□□□ -0.25
MSH5-216ENST00000484309 GIT1Q9Y2X7 761 aa13.52□□□□□ -0.25
MSH5-216ENST00000484309 C2orf16Q68DN1 1984 aa13.51□□□□□ -0.25
MSH5-216ENST00000484309 MTCL1Q9Y4B5 1905 aaKnown RBP13.51□□□□□ -0.25
MSH5-216ENST00000484309 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.51□□□□□ -0.25
MSH5-216ENST00000484309 GRXCR2A6NFK2 248 aa13.51□□□□□ -0.25
MSH5-216ENST00000484309 C2orf71A6NGG8 1288 aa13.51□□□□□ -0.25
MSH5-216ENST00000484309 INPPL1O15357 1258 aa13.51□□□□□ -0.25
MSH5-216ENST00000484309 RECQL4O94761 1208 aa13.51□□□□□ -0.25
MSH5-216ENST00000484309 HARSP12081 509 aaKnown RBP13.51□□□□□ -0.25
MSH5-216ENST00000484309 PDE12Q6L8Q7 609 aaKnown RBP13.51□□□□□ -0.25
MSH5-216ENST00000484309 ZBTB33Q86T24 672 aa13.51□□□□□ -0.25
MSH5-216ENST00000484309 DDX53Q86TM3 631 aaKnown RBP13.51□□□□□ -0.25
MSH5-216ENST00000484309 GSTCDQ8NEC7 633 aa13.51□□□□□ -0.25
MSH5-216ENST00000484309 RAD54LQ92698 747 aa13.51□□□□□ -0.25
MSH5-216ENST00000484309 REEP2Q9BRK0 252 aa13.51□□□□□ -0.25
MSH5-216ENST00000484309 TMEM175Q9BSA9 504 aa13.51□□□□□ -0.25
MSH5-216ENST00000484309 TARS2Q9BW92 718 aaKnown RBP13.51□□□□□ -0.25
MSH5-216ENST00000484309 APOL5Q9BWW9 433 aa13.51□□□□□ -0.25
MSH5-216ENST00000484309 ZSCAN16Q9H4T2 348 aaPredicted RBP13.51□□□□□ -0.25
MSH5-216ENST00000484309 NGRNQ9NPE2 291 aaKnown RBP13.51□□□□□ -0.25
MSH5-216ENST00000484309 MARCH5Q9NX47 278 aa13.51□□□□□ -0.25
MSH5-216ENST00000484309 ARHGAP28Q9P2N2 729 aa13.51□□□□□ -0.25
MSH5-216ENST00000484309 CD207Q9UJ71 328 aa13.51□□□□□ -0.25
MSH5-216ENST00000484309 ANK1P16157 1881 aa13.5□□□□□ -0.25
MSH5-216ENST00000484309 MBTPS2O43462 519 aa13.5□□□□□ -0.25
MSH5-216ENST00000484309 CXCL14O95715 111 aa13.5□□□□□ -0.25
MSH5-216ENST00000484309 ALDH2P05091 517 aa13.5□□□□□ -0.25
MSH5-216ENST00000484309 KRT18P05783 430 aaKnown RBP13.5□□□□□ -0.25
MSH5-216ENST00000484309 PLS3P13797 630 aa13.5□□□□□ -0.25
MSH5-216ENST00000484309 OSTNP61366 133 aa13.5□□□□□ -0.25
MSH5-216ENST00000484309 DSC1Q08554 894 aa13.5□□□□□ -0.25
MSH5-216ENST00000484309 GRIK3Q13003 919 aa13.5□□□□□ -0.25
MSH5-216ENST00000484309 STK38Q15208 465 aa13.5□□□□□ -0.25
MSH5-216ENST00000484309 DCAF4L1Q3SXM0 396 aa13.5□□□□□ -0.25
MSH5-216ENST00000484309 ZNF568Q3ZCX4 644 aa13.5□□□□□ -0.25
MSH5-216ENST00000484309 CEP120Q8N960 986 aa13.5□□□□□ -0.25
MSH5-216ENST00000484309 MSLNLQ96KJ4 702 aa13.5□□□□□ -0.25
MSH5-216ENST00000484309 ACO2Q99798 780 aaKnown RBP13.5□□□□□ -0.25
MSH5-216ENST00000484309 TIPINQ9BVW5 301 aa13.5□□□□□ -0.25
MSH5-216ENST00000484309 CCSER1Q9C0I3 900 aa13.5□□□□□ -0.25
MSH5-216ENST00000484309 ZHX3Q9H4I2 956 aa13.5□□□□□ -0.25
MSH5-216ENST00000484309 TMEM134Q9H6X4 195 aa13.5□□□□□ -0.25
MSH5-216ENST00000484309 CD320Q9NPF0 282 aa13.5□□□□□ -0.25
MSH5-216ENST00000484309 TFIP11Q9UBB9 837 aaKnown RBP13.5□□□□□ -0.25
MSH5-216ENST00000484309 SRPRBQ9Y5M8 271 aaKnown RBP13.5□□□□□ -0.25
MSH5-216ENST00000484309 CASTOR2A6NHX0 329 aa13.49□□□□□ -0.25
MSH5-216ENST00000484309 C2CD2LO14523 706 aa13.49□□□□□ -0.25
MSH5-216ENST00000484309 PTGESO14684 152 aa13.49□□□□□ -0.25
MSH5-216ENST00000484309 SLC26A4O43511 780 aa13.49□□□□□ -0.25
MSH5-216ENST00000484309 CLASP2O75122 1294 aaKnown RBP13.49□□□□□ -0.25
MSH5-216ENST00000484309 FAM13AO94988 1023 aa13.49□□□□□ -0.25
MSH5-216ENST00000484309 CTSAP10619 480 aa13.49□□□□□ -0.25
MSH5-216ENST00000484309 SMAD4Q13485 552 aaKnown RBP13.49□□□□□ -0.25
MSH5-216ENST00000484309 PKP1Q13835 747 aa13.49□□□□□ -0.25
MSH5-216ENST00000484309 SLC39A14Q15043 492 aa13.49□□□□□ -0.25
MSH5-216ENST00000484309 PUS10Q3MIT2 529 aaKnown RBP13.49□□□□□ -0.25
MSH5-216ENST00000484309 GLRA4Q5JXX5 417 aa13.49□□□□□ -0.25
MSH5-216ENST00000484309 TAS1R1Q7RTX1 841 aa13.49□□□□□ -0.25
MSH5-216ENST00000484309 FAM178BQ8IXR5 827 aa13.49□□□□□ -0.25
MSH5-216ENST00000484309 KCTD17Q8N5Z5 321 aa13.49□□□□□ -0.25
MSH5-216ENST00000484309 MRPL43Q8N983 215 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms