RNA–Protein interactions for RNA: ENST00000484178.5

SSBP1-211, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSBP1, Length 676 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-211ENST00000484178 ALDH1L1O75891 902 aa5.53□□□□□ -1.52
SSBP1-211ENST00000484178 UBTFL1P0CB47 393 aaPredicted RBP5.53□□□□□ -1.52
SSBP1-211ENST00000484178 GRIA2P42262 883 aa5.53□□□□□ -1.52
SSBP1-211ENST00000484178 PPP2R2AP63151 447 aa5.53□□□□□ -1.52
SSBP1-211ENST00000484178 PABPC4Q13310 644 aaKnown RBP eCLIP5.53□□□□□ -1.522e-25■■■□□ 18
SSBP1-211ENST00000484178 MTX1Q13505 466 aa5.53□□□□□ -1.52
SSBP1-211ENST00000484178 SAFB2Q14151 953 aaKnown RBP eCLIP5.53□□□□□ -1.52
SSBP1-211ENST00000484178 KRT32Q14532 448 aa5.53□□□□□ -1.52
SSBP1-211ENST00000484178 NOLC1Q14978 699 aaKnown RBP eCLIP5.53□□□□□ -1.52
SSBP1-211ENST00000484178 SLC10A6Q3KNW5 377 aa5.53□□□□□ -1.52
SSBP1-211ENST00000484178 CD276Q5ZPR3 534 aa5.53□□□□□ -1.52
SSBP1-211ENST00000484178 SULT6B1Q6IMI4 303 aa5.53□□□□□ -1.52
SSBP1-211ENST00000484178 TMED8Q6PL24 325 aaPredicted RBP5.53□□□□□ -1.52
SSBP1-211ENST00000484178 IFNL2Q8IZJ0 200 aa5.53□□□□□ -1.52
SSBP1-211ENST00000484178 LRRC47Q8N1G4 583 aaKnown RBP5.53□□□□□ -1.52
SSBP1-211ENST00000484178 ZNF503Q96F45 646 aa5.53□□□□□ -1.52
SSBP1-211ENST00000484178 ZFYVE21Q9BQ24 234 aa5.53□□□□□ -1.52
SSBP1-211ENST00000484178 JAM3Q9BX67 310 aa5.53□□□□□ -1.52
SSBP1-211ENST00000484178 DDX19AQ9NUU7 478 aaKnown RBP5.53□□□□□ -1.52
SSBP1-211ENST00000484178 HMG20BQ9P0W2 317 aa5.53□□□□□ -1.52
SSBP1-211ENST00000484178 ARHGAP20Q9P2F6 1191 aa5.53□□□□□ -1.52
SSBP1-211ENST00000484178 TSPYL4Q9UJ04 414 aa5.53□□□□□ -1.52
SSBP1-211ENST00000484178 ZFP69BQ9UJL9 534 aa5.53□□□□□ -1.52
SSBP1-211ENST00000484178 MAPRE3Q9UPY8 281 aa5.53□□□□□ -1.52
SSBP1-211ENST00000484178 SMC3Q9UQE7 1217 aa5.53□□□□□ -1.52
SSBP1-211ENST00000484178 PAXBP1Q9Y5B6 917 aa5.53□□□□□ -1.52
SSBP1-211ENST00000484178 USP6P35125 1406 aa5.53□□□□□ -1.52
SSBP1-211ENST00000484178 ANKARQ7Z5J8 1434 aa5.53□□□□□ -1.52
SSBP1-211ENST00000484178 ITSN1Q15811 1721 aa5.53□□□□□ -1.52
SSBP1-211ENST00000484178 RFX7Q2KHR2 1363 aa5.53□□□□□ -1.52
SSBP1-211ENST00000484178 RPAP1Q9BWH6 1393 aaPredicted RBP5.53□□□□□ -1.52
SSBP1-211ENST00000484178 PLEKHG1Q9ULL1 1385 aa5.53□□□□□ -1.52
SSBP1-211ENST00000484178 IGSF1Q8N6C5 1336 aa5.52□□□□□ -1.53
SSBP1-211ENST00000484178 SETD1AO15047 1707 aaKnown RBP5.52□□□□□ -1.53
SSBP1-211ENST00000484178 A0A1W2PQU0 124 aa5.52□□□□□ -1.53
SSBP1-211ENST00000484178 GSG1L2A8MUP6 293 aa5.52□□□□□ -1.53
SSBP1-211ENST00000484178 STX6O43752 255 aa5.52□□□□□ -1.53
SSBP1-211ENST00000484178 DLX3O60479 287 aa5.52□□□□□ -1.53
SSBP1-211ENST00000484178 MSCO60682 206 aa5.52□□□□□ -1.53
SSBP1-211ENST00000484178 FBXO21O94952 628 aa5.52□□□□□ -1.53
SSBP1-211ENST00000484178 GNALP38405 381 aa5.52□□□□□ -1.53
SSBP1-211ENST00000484178 SPIRE1Q08AE8 756 aa5.52□□□□□ -1.53
SSBP1-211ENST00000484178 TUSC3Q13454 348 aa5.52□□□□□ -1.53
SSBP1-211ENST00000484178 TTF1Q15361 905 aaPredicted RBP5.52□□□□□ -1.53
SSBP1-211ENST00000484178 CRB2Q5IJ48 1285 aa5.52□□□□□ -1.53
SSBP1-211ENST00000484178 CT47A1Q5JQC4 288 aaPredicted RBP5.52□□□□□ -1.53
SSBP1-211ENST00000484178 DNTTIP2Q5QJE6 756 aaKnown RBP5.52□□□□□ -1.53
SSBP1-211ENST00000484178 RNF207Q6ZRF8 634 aa5.52□□□□□ -1.53
SSBP1-211ENST00000484178 NME9Q86XW9 330 aa5.52□□□□□ -1.53
SSBP1-211ENST00000484178 AFAP1L2Q8N4X5 818 aa5.52□□□□□ -1.53
SSBP1-211ENST00000484178 AMER2Q8N7J2 671 aa5.52□□□□□ -1.53
SSBP1-211ENST00000484178 GNRHR2Q96P88 292 aa5.52□□□□□ -1.53
SSBP1-211ENST00000484178 MEIS3Q99687 375 aa5.52□□□□□ -1.53
SSBP1-211ENST00000484178 NCOA5Q9HCD5 579 aaKnown RBP5.52□□□□□ -1.53
SSBP1-211ENST00000484178 MSL2Q9HCI7 577 aa5.52□□□□□ -1.53
SSBP1-211ENST00000484178 ZFR2Q9UPR6 939 aaKnown RBP5.52□□□□□ -1.53
SSBP1-211ENST00000484178 CYP46A1Q9Y6A2 500 aa5.52□□□□□ -1.53
SSBP1-211ENST00000484178 RGPD1P0DJD0 1748 aa5.51□□□□□ -1.53
SSBP1-211ENST00000484178 NALCNQ8IZF0 1738 aa5.51□□□□□ -1.53
SSBP1-211ENST00000484178 NPHP3Q7Z494 1330 aa5.51□□□□□ -1.53
SSBP1-211ENST00000484178 NCAPD2Q15021 1401 aa5.51□□□□□ -1.53
SSBP1-211ENST00000484178 IQCA1LA6NCM1 817 aa5.51□□□□□ -1.53
SSBP1-211ENST00000484178 ZNF839A8K0R7 811 aa5.51□□□□□ -1.53
SSBP1-211ENST00000484178 H0Y858 1186 aa5.51□□□□□ -1.53
SSBP1-211ENST00000484178 ELL2O00472 640 aaPredicted RBP5.51□□□□□ -1.53
SSBP1-211ENST00000484178 CUTAO60888 179 aa5.51□□□□□ -1.53
SSBP1-211ENST00000484178 RAPGEF3O95398 923 aa5.51□□□□□ -1.53
SSBP1-211ENST00000484178 IL18BPO95998 194 aa5.51□□□□□ -1.53
SSBP1-211ENST00000484178 COMTP21964 271 aa5.51□□□□□ -1.53
SSBP1-211ENST00000484178 KRT85P78386 507 aa5.51□□□□□ -1.53
SSBP1-211ENST00000484178 PFKPQ01813 784 aa5.51□□□□□ -1.53
SSBP1-211ENST00000484178 GRIN1Q05586 938 aa5.51□□□□□ -1.53
SSBP1-211ENST00000484178 BIRC2Q13490 618 aa5.51□□□□□ -1.53
SSBP1-211ENST00000484178 UBE4AQ14139 1066 aa5.51□□□□□ -1.53
SSBP1-211ENST00000484178 TAF7Q15545 349 aaPredicted RBP5.51□□□□□ -1.53
SSBP1-211ENST00000484178 KIZQ2M2Z5 673 aa5.51□□□□□ -1.53
SSBP1-211ENST00000484178 MAP9Q49MG5 647 aa5.51□□□□□ -1.53
SSBP1-211ENST00000484178 LBX2Q6XYB7 198 aa5.51□□□□□ -1.53
SSBP1-211ENST00000484178 CLASRPQ8N2M8 674 aaKnown RBP5.51□□□□□ -1.53
SSBP1-211ENST00000484178 ZGPATQ8N5A5 531 aaKnown RBP5.51□□□□□ -1.53
SSBP1-211ENST00000484178 DCAF4Q8WV16 495 aa5.51□□□□□ -1.53
SSBP1-211ENST00000484178 EVI5LQ96CN4 794 aa5.51□□□□□ -1.53
SSBP1-211ENST00000484178 NEIL1Q96FI4 390 aaPredicted RBP5.51□□□□□ -1.53
SSBP1-211ENST00000484178 RPS6KC1Q96S38 1066 aa5.51□□□□□ -1.53
SSBP1-211ENST00000484178 PHF20Q9BVI0 1012 aa5.51□□□□□ -1.53
SSBP1-211ENST00000484178 PRDM16Q9HAZ2 1276 aa5.51□□□□□ -1.53
SSBP1-211ENST00000484178 PPARGC1AQ9UBK2 798 aaKnown RBP5.51□□□□□ -1.53
SSBP1-211ENST00000484178 N4BP2Q86UW6 1770 aaPredicted RBP5.51□□□□□ -1.53
SSBP1-211ENST00000484178 TMEM2Q9UHN6 1383 aa5.51□□□□□ -1.53
SSBP1-211ENST00000484178 CACNA1FO60840 1977 aa5.51□□□□□ -1.53
SSBP1-211ENST00000484178 MAP2P11137 1827 aaKnown RBP5.51□□□□□ -1.53
SSBP1-211ENST00000484178 LRRC37A3O60309 1634 aa5.5□□□□□ -1.53
SSBP1-211ENST00000484178 PLD2O14939 933 aa5.5□□□□□ -1.53
SSBP1-211ENST00000484178 CCP110O43303 1012 aa5.5□□□□□ -1.53
SSBP1-211ENST00000484178 ADCY5O95622 1261 aa5.5□□□□□ -1.53
SSBP1-211ENST00000484178 GRK2P25098 689 aa5.5□□□□□ -1.53
SSBP1-211ENST00000484178 POLD1P28340 1107 aa5.5□□□□□ -1.53
SSBP1-211ENST00000484178 GRK3P35626 688 aa5.5□□□□□ -1.53
SSBP1-211ENST00000484178 TGFB2P61812 414 aa5.5□□□□□ -1.53
SSBP1-211ENST00000484178 MCL1Q07820 350 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms