RNA–Protein interactions for RNA: ENST00000483544.1

LINC00477-201, long intergenic non-protein coding RNA 477, humanhuman

TSL 2 BASIC

Gene LINC00477, Length 1,710 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477-201ENST00000483544 MTMR3Q13615 1198 aa13.41□□□□□ -0.26
LINC00477-201ENST00000483544 PUS10Q3MIT2 529 aaKnown RBP13.41□□□□□ -0.26
LINC00477-201ENST00000483544 SPDYE2Q495Y8 402 aa13.41□□□□□ -0.26
LINC00477-201ENST00000483544 SPDYCQ5MJ68 293 aa13.41□□□□□ -0.26
LINC00477-201ENST00000483544 PEX26Q7Z412 305 aa13.41□□□□□ -0.26
LINC00477-201ENST00000483544 MAATS1Q7Z4T9 603 aa13.41□□□□□ -0.26
LINC00477-201ENST00000483544 GSPT2Q8IYD1 628 aaKnown RBP13.41□□□□□ -0.26
LINC00477-201ENST00000483544 NSMCE1Q8WV22 266 aa13.41□□□□□ -0.26
LINC00477-201ENST00000483544 MS4A14Q96JA4 679 aa13.41□□□□□ -0.26
LINC00477-201ENST00000483544 PSMB7Q99436 277 aa13.41□□□□□ -0.26
LINC00477-201ENST00000483544 KRT12Q99456 494 aa13.41□□□□□ -0.26
LINC00477-201ENST00000483544 PACSIN1Q9BY11 444 aa13.41□□□□□ -0.26
LINC00477-201ENST00000483544 ST6GALNAC4Q9H4F1 302 aa13.41□□□□□ -0.26
LINC00477-201ENST00000483544 LARSQ9P2J5 1176 aaKnown RBP13.41□□□□□ -0.26
LINC00477-201ENST00000483544 AMFRQ9UKV5 643 aa13.41□□□□□ -0.26
LINC00477-201ENST00000483544 PFASO15067 1338 aa13.41□□□□□ -0.26
LINC00477-201ENST00000483544 RPTORQ8N122 1335 aa13.41□□□□□ -0.26
LINC00477-201ENST00000483544 DDX3XO00571 662 aaKnown RBP eCLIP13.4□□□□□ -0.26
LINC00477-201ENST00000483544 NDUFAB1O14561 156 aa13.4□□□□□ -0.26
LINC00477-201ENST00000483544 CLIC2O15247 247 aa13.4□□□□□ -0.26
LINC00477-201ENST00000483544 P4HBP07237 508 aaKnown RBP13.4□□□□□ -0.26
LINC00477-201ENST00000483544 GLI1P08151 1106 aa13.4□□□□□ -0.26
LINC00477-201ENST00000483544 FAM200BP0CF97 657 aa13.4□□□□□ -0.26
LINC00477-201ENST00000483544 SLURP2P0DP57 97 aa13.4□□□□□ -0.26
LINC00477-201ENST00000483544 MAGEA10P43363 369 aaPredicted RBP13.4□□□□□ -0.26
LINC00477-201ENST00000483544 BAG6P46379 1132 aa13.4□□□□□ -0.26
LINC00477-201ENST00000483544 JAG1P78504 1218 aa13.4□□□□□ -0.26
LINC00477-201ENST00000483544 MYL7Q01449 175 aa13.4□□□□□ -0.26
LINC00477-201ENST00000483544 LMNB2Q03252 620 aa13.4□□□□□ -0.26
LINC00477-201ENST00000483544 RRP1BQ14684 758 aaKnown RBP13.4□□□□□ -0.26
LINC00477-201ENST00000483544 KIF22Q14807 665 aa13.4□□□□□ -0.26
LINC00477-201ENST00000483544 INTS8Q75QN2 995 aaKnown RBP13.4□□□□□ -0.26
LINC00477-201ENST00000483544 ARMC9Q7Z3E5 817 aa13.4□□□□□ -0.26
LINC00477-201ENST00000483544 CYP2W1Q8TAV3 490 aa13.4□□□□□ -0.26
LINC00477-201ENST00000483544 HES6Q96HZ4 224 aa13.4□□□□□ -0.26
LINC00477-201ENST00000483544 GMLQ99445 158 aa13.4□□□□□ -0.26
LINC00477-201ENST00000483544 INTS2Q9H0H0 1204 aaKnown RBP13.4□□□□□ -0.26
LINC00477-201ENST00000483544 APEX2Q9UBZ4 518 aa13.4□□□□□ -0.26
LINC00477-201ENST00000483544 HMGB1P1B2RPK0 211 aaPredicted RBP13.39□□□□□ -0.27
LINC00477-201ENST00000483544 EVI5O60447 810 aa13.39□□□□□ -0.27
LINC00477-201ENST00000483544 ICAM1P05362 532 aa13.39□□□□□ -0.27
LINC00477-201ENST00000483544 ASNSP08243 561 aa13.39□□□□□ -0.27
LINC00477-201ENST00000483544 ZBTB48P10074 688 aaPredicted RBP13.39□□□□□ -0.27
LINC00477-201ENST00000483544 ZFXP17010 805 aaPredicted RBP13.39□□□□□ -0.27
LINC00477-201ENST00000483544 HSPA6P17066 643 aa13.39□□□□□ -0.27
LINC00477-201ENST00000483544 ATP4AP20648 1035 aa13.39□□□□□ -0.27
LINC00477-201ENST00000483544 NMT1P30419 496 aaKnown RBP13.39□□□□□ -0.27
LINC00477-201ENST00000483544 ENPEPQ07075 957 aa13.39□□□□□ -0.27
LINC00477-201ENST00000483544 BFSP1Q12934 665 aa13.39□□□□□ -0.27
LINC00477-201ENST00000483544 CLPPQ16740 277 aaPredicted RBP13.39□□□□□ -0.27
LINC00477-201ENST00000483544 PABPC1LQ4VXU2 614 aaKnown RBP13.39□□□□□ -0.27
LINC00477-201ENST00000483544 LACTB2Q53H82 288 aaPredicted RBP13.39□□□□□ -0.27
LINC00477-201ENST00000483544 ODR4Q5SWX8 454 aa13.39□□□□□ -0.27
LINC00477-201ENST00000483544 C6orf89Q6UWU4 347 aa13.39□□□□□ -0.27
LINC00477-201ENST00000483544 NT5DC3Q86UY8 548 aa13.39□□□□□ -0.27
LINC00477-201ENST00000483544 LDHDQ86WU2 507 aa13.39□□□□□ -0.27
LINC00477-201ENST00000483544 RHOT2Q8IXI1 618 aa13.39□□□□□ -0.27
LINC00477-201ENST00000483544 MORC4Q8TE76 937 aa13.39□□□□□ -0.27
LINC00477-201ENST00000483544 PIGOQ8TEQ8 1089 aa13.39□□□□□ -0.27
LINC00477-201ENST00000483544 CTNNBL1Q8WYA6 563 aaPredicted RBP13.39□□□□□ -0.27
LINC00477-201ENST00000483544 HVCN1Q96D96 273 aa13.39□□□□□ -0.27
LINC00477-201ENST00000483544 ACCSQ96QU6 501 aa13.39□□□□□ -0.27
LINC00477-201ENST00000483544 SYT11Q9BT88 431 aa13.39□□□□□ -0.27
LINC00477-201ENST00000483544 CENPHQ9H3R5 247 aa13.39□□□□□ -0.27
LINC00477-201ENST00000483544 WDR35Q9P2L0 1181 aa13.39□□□□□ -0.27
LINC00477-201ENST00000483544 ATXN10Q9UBB4 475 aa13.39□□□□□ -0.27
LINC00477-201ENST00000483544 CIDEBQ9UHD4 219 aa13.39□□□□□ -0.27
LINC00477-201ENST00000483544 DNAJC12Q9UKB3 198 aa13.39□□□□□ -0.27
LINC00477-201ENST00000483544 ASB3Q9Y575 518 aa13.39□□□□□ -0.27
LINC00477-201ENST00000483544 ZNF536O15090 1300 aa13.39□□□□□ -0.27
LINC00477-201ENST00000483544 TNS1Q9HBL0 1735 aaKnown RBP13.39□□□□□ -0.27
LINC00477-201ENST00000483544 YDJCA8MPS7 323 aa13.39□□□□□ -0.27
LINC00477-201ENST00000483544 RAD51CO43502 376 aa13.39□□□□□ -0.27
LINC00477-201ENST00000483544 DNAJC8O75937 253 aaPredicted RBP13.39□□□□□ -0.27
LINC00477-201ENST00000483544 RPSAP08865 295 aaKnown RBP13.39□□□□□ -0.27
LINC00477-201ENST00000483544 FDX1P10109 184 aa13.39□□□□□ -0.27
LINC00477-201ENST00000483544 TNFAIP3P21580 790 aa13.39□□□□□ -0.27
LINC00477-201ENST00000483544 ALDH3A1P30838 453 aa13.39□□□□□ -0.27
LINC00477-201ENST00000483544 PTGER2P43116 358 aa13.39□□□□□ -0.27
LINC00477-201ENST00000483544 CARSP49589 748 aaKnown RBP13.39□□□□□ -0.27
LINC00477-201ENST00000483544 INHBCP55103 352 aa13.39□□□□□ -0.27
LINC00477-201ENST00000483544 GNGT1P63211 74 aa13.39□□□□□ -0.27
LINC00477-201ENST00000483544 LBRQ14739 615 aaKnown RBP13.39□□□□□ -0.27
LINC00477-201ENST00000483544 DRAP1Q14919 205 aaPredicted RBP13.39□□□□□ -0.27
LINC00477-201ENST00000483544 SESTD1Q86VW0 696 aa13.39□□□□□ -0.27
LINC00477-201ENST00000483544 SYCP3Q8IZU3 236 aa13.39□□□□□ -0.27
LINC00477-201ENST00000483544 METTL13Q8N6R0 699 aa13.39□□□□□ -0.27
LINC00477-201ENST00000483544 TSEN2Q8NCE0 465 aaKnown RBP13.39□□□□□ -0.27
LINC00477-201ENST00000483544 AGBL3Q8NEM8 1001 aa13.39□□□□□ -0.27
LINC00477-201ENST00000483544 U2AF1L4Q8WU68 220 aaKnown RBP13.39□□□□□ -0.27
LINC00477-201ENST00000483544 CASKIN2Q8WXE0 1202 aa13.39□□□□□ -0.27
LINC00477-201ENST00000483544 TBC1D31Q96DN5 1066 aa13.39□□□□□ -0.27
LINC00477-201ENST00000483544 DHRS1Q96LJ7 313 aa13.39□□□□□ -0.27
LINC00477-201ENST00000483544 ZIM3Q96PE6 472 aa13.39□□□□□ -0.27
LINC00477-201ENST00000483544 UIMC1Q96RL1 719 aa13.39□□□□□ -0.27
LINC00477-201ENST00000483544 LXNQ9BS40 222 aa13.39□□□□□ -0.27
LINC00477-201ENST00000483544 FAM114A2Q9NRY5 505 aa13.39□□□□□ -0.27
LINC00477-201ENST00000483544 SMARCAL1Q9NZC9 954 aa13.39□□□□□ -0.27
LINC00477-201ENST00000483544 EHD2Q9NZN4 543 aa13.39□□□□□ -0.27
LINC00477-201ENST00000483544 NFU1Q9UMS0 254 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms