RNA–Protein interactions for RNA: ENST00000483442.5

LRCH3-217, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-217ENST00000483442 CYP1A1P04798 512 aaPredicted RBP4.54□□□□□ -1.68
LRCH3-217ENST00000483442 HSP90B1P14625 803 aaKnown RBP4.54□□□□□ -1.68
LRCH3-217ENST00000483442 ETFBP38117 255 aa4.54□□□□□ -1.68
LRCH3-217ENST00000483442 PLA2G5P39877 138 aa4.54□□□□□ -1.68
LRCH3-217ENST00000483442 KCNJ6P48051 423 aa4.54□□□□□ -1.68
LRCH3-217ENST00000483442 KCNAB2Q13303 367 aa4.54□□□□□ -1.68
LRCH3-217ENST00000483442 LSAMPQ13449 338 aa4.54□□□□□ -1.68
LRCH3-217ENST00000483442 SNAPC2Q13487 334 aa4.54□□□□□ -1.68
LRCH3-217ENST00000483442 VGLL4Q14135 290 aa4.54□□□□□ -1.68
LRCH3-217ENST00000483442 KRT24Q2M2I5 525 aa4.54□□□□□ -1.68
LRCH3-217ENST00000483442 EMC4Q5J8M3 183 aa4.54□□□□□ -1.68
LRCH3-217ENST00000483442 SLC35F1Q5T1Q4 408 aa4.54□□□□□ -1.68
LRCH3-217ENST00000483442 ACBD5Q5T8D3 534 aaPredicted RBP4.54□□□□□ -1.68
LRCH3-217ENST00000483442 CERS5Q8N5B7 392 aa4.54□□□□□ -1.68
LRCH3-217ENST00000483442 ZBTB38Q8NAP3 1195 aaPredicted RBP4.54□□□□□ -1.68
LRCH3-217ENST00000483442 DNERQ8NFT8 737 aa4.54□□□□□ -1.68
LRCH3-217ENST00000483442 MAFAQ8NHW3 353 aaPredicted RBP4.54□□□□□ -1.68
LRCH3-217ENST00000483442 ZKSCAN4Q969J2 545 aaPredicted RBP4.54□□□□□ -1.68
LRCH3-217ENST00000483442 CHAMP1Q96JM3 812 aa4.54□□□□□ -1.68
LRCH3-217ENST00000483442 CDX2Q99626 313 aaPredicted RBP4.54□□□□□ -1.68
LRCH3-217ENST00000483442 TDRD3Q9H7E2 651 aaKnown RBP4.54□□□□□ -1.68
LRCH3-217ENST00000483442 CD209Q9NNX6 404 aa4.54□□□□□ -1.68
LRCH3-217ENST00000483442 CLDND1Q9NY35 253 aa4.54□□□□□ -1.68
LRCH3-217ENST00000483442 CHPF2Q9P2E5 772 aa4.54□□□□□ -1.68
LRCH3-217ENST00000483442 ZNF70Q9UC06 446 aaPredicted RBP4.54□□□□□ -1.68
LRCH3-217ENST00000483442 STRIP2Q9ULQ0 834 aa4.54□□□□□ -1.68
LRCH3-217ENST00000483442 PCDHB4Q9Y5E5 795 aa4.54□□□□□ -1.68
LRCH3-217ENST00000483442 COL4A1P02462 1669 aa4.54□□□□□ -1.68
LRCH3-217ENST00000483442 UNC80Q8N2C7 3258 aa4.54□□□□□ -1.68
LRCH3-217ENST00000483442 ANKRD36CQ5JPF3 1778 aa4.53□□□□□ -1.68
LRCH3-217ENST00000483442 ZNF804BA4D1E1 1349 aa4.53□□□□□ -1.68
LRCH3-217ENST00000483442 H7BY64 318 aa4.53□□□□□ -1.68
LRCH3-217ENST00000483442 SNAP23O00161 211 aa4.53□□□□□ -1.68
LRCH3-217ENST00000483442 SLPIP03973 132 aa4.53□□□□□ -1.68
LRCH3-217ENST00000483442 NAT2P11245 290 aa4.53□□□□□ -1.68
LRCH3-217ENST00000483442 C6P13671 934 aa4.53□□□□□ -1.68
LRCH3-217ENST00000483442 KLRK1P26718 216 aa4.53□□□□□ -1.68
LRCH3-217ENST00000483442 LTBRP36941 435 aa4.53□□□□□ -1.68
LRCH3-217ENST00000483442 FLT3LGP49771 235 aa4.53□□□□□ -1.68
LRCH3-217ENST00000483442 NFE2L2Q16236 605 aa4.53□□□□□ -1.68
LRCH3-217ENST00000483442 FAM109BQ6ICB4 259 aaPredicted RBP4.53□□□□□ -1.68
LRCH3-217ENST00000483442 ZNF585AQ6P3V2 769 aa4.53□□□□□ -1.68
LRCH3-217ENST00000483442 FAM124AQ86V42 546 aa4.53□□□□□ -1.68
LRCH3-217ENST00000483442 ERO1BQ86YB8 467 aa4.53□□□□□ -1.68
LRCH3-217ENST00000483442 KBTBD2Q8IY47 623 aa4.53□□□□□ -1.68
LRCH3-217ENST00000483442 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.53□□□□□ -1.68
LRCH3-217ENST00000483442 NUDT10Q8NFP7 164 aa4.53□□□□□ -1.68
LRCH3-217ENST00000483442 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.53□□□□□ -1.68
LRCH3-217ENST00000483442 CLEC4DQ8WXI8 215 aa4.53□□□□□ -1.68
LRCH3-217ENST00000483442 NUDT11Q96G61 164 aa4.53□□□□□ -1.68
LRCH3-217ENST00000483442 CDC5LQ99459 802 aaKnown RBP4.53□□□□□ -1.68
LRCH3-217ENST00000483442 MYD88Q99836 296 aa4.53□□□□□ -1.68
LRCH3-217ENST00000483442 YIPF4Q9BSR8 244 aa4.53□□□□□ -1.68
LRCH3-217ENST00000483442 JAM3Q9BX67 310 aa4.53□□□□□ -1.68
LRCH3-217ENST00000483442 TMEM39BQ9GZU3 492 aa4.53□□□□□ -1.68
LRCH3-217ENST00000483442 L2HGDHQ9H9P8 463 aa4.53□□□□□ -1.68
LRCH3-217ENST00000483442 IGSF5Q9NSI5 407 aa4.53□□□□□ -1.68
LRCH3-217ENST00000483442 ACTR10Q9NZ32 417 aa4.53□□□□□ -1.68
LRCH3-217ENST00000483442 LRP2BPQ9P2M1 347 aa4.53□□□□□ -1.68
LRCH3-217ENST00000483442 COA3Q9Y2R0 106 aaPredicted RBP4.53□□□□□ -1.68
LRCH3-217ENST00000483442 TSC22D4Q9Y3Q8 395 aa4.53□□□□□ -1.68
LRCH3-217ENST00000483442 LAS1LQ9Y4W2 734 aaKnown RBP4.53□□□□□ -1.68
LRCH3-217ENST00000483442 NPFFR2Q9Y5X5 522 aa4.53□□□□□ -1.68
LRCH3-217ENST00000483442 LAMB2P55268 1798 aa4.53□□□□□ -1.69
LRCH3-217ENST00000483442 SSC5DA1L4H1 1573 aa4.53□□□□□ -1.69
LRCH3-217ENST00000483442 COL3A1P02461 1466 aaPredicted RBP4.52□□□□□ -1.69
LRCH3-217ENST00000483442 B4GALT4O60513 344 aa4.52□□□□□ -1.69
LRCH3-217ENST00000483442 PCCAP05165 728 aaPredicted RBP4.52□□□□□ -1.69
LRCH3-217ENST00000483442 KCNJ4P48050 445 aa4.52□□□□□ -1.69
LRCH3-217ENST00000483442 RIPK4P57078 832 aa4.52□□□□□ -1.69
LRCH3-217ENST00000483442 PPP2CBP62714 309 aa4.52□□□□□ -1.69
LRCH3-217ENST00000483442 PPP2CAP67775 309 aa4.52□□□□□ -1.69
LRCH3-217ENST00000483442 GRIN1Q05586 938 aa4.52□□□□□ -1.69
LRCH3-217ENST00000483442 MAP3K12Q12852 859 aa4.52□□□□□ -1.69
LRCH3-217ENST00000483442 TNFAIP1Q13829 316 aa4.52□□□□□ -1.69
LRCH3-217ENST00000483442 MIGA2Q7L4E1 593 aa4.52□□□□□ -1.69
LRCH3-217ENST00000483442 ANKRD23Q86SG2 305 aa4.52□□□□□ -1.69
LRCH3-217ENST00000483442 TTLL11Q8NHH1 800 aa4.52□□□□□ -1.69
LRCH3-217ENST00000483442 SORCS2Q96PQ0 1159 aa4.52□□□□□ -1.69
LRCH3-217ENST00000483442 KLC2Q9H0B6 622 aa4.52□□□□□ -1.69
LRCH3-217ENST00000483442 TMEM168Q9H0V1 697 aa4.52□□□□□ -1.69
LRCH3-217ENST00000483442 MEGF9Q9H1U4 602 aa4.52□□□□□ -1.69
LRCH3-217ENST00000483442 C11orf49Q9H6J7 331 aa4.52□□□□□ -1.69
LRCH3-217ENST00000483442 ZCCHC17Q9NP64 241 aaKnown RBP4.52□□□□□ -1.69
LRCH3-217ENST00000483442 NGRNQ9NPE2 291 aaKnown RBP4.52□□□□□ -1.69
LRCH3-217ENST00000483442 MYOTQ9UBF9 498 aa4.52□□□□□ -1.69
LRCH3-217ENST00000483442 ASH2LQ9UBL3 628 aa4.52□□□□□ -1.69
LRCH3-217ENST00000483442 DBF4Q9UBU7 674 aaPredicted RBP4.52□□□□□ -1.69
LRCH3-217ENST00000483442 KDM3BQ7LBC6 1761 aa4.52□□□□□ -1.69
LRCH3-217ENST00000483442 MED23Q9ULK4 1368 aa4.52□□□□□ -1.69
LRCH3-217ENST00000483442 NPEPPSL1A6NEC2 478 aa4.51□□□□□ -1.69
LRCH3-217ENST00000483442 SLC27A2O14975 620 aa4.51□□□□□ -1.69
LRCH3-217ENST00000483442 TAF5LO75529 589 aa4.51□□□□□ -1.69
LRCH3-217ENST00000483442 DDAH1O94760 285 aa4.51□□□□□ -1.69
LRCH3-217ENST00000483442 GJB6O95452 261 aa4.51□□□□□ -1.69
LRCH3-217ENST00000483442 CPP00450 1065 aa4.51□□□□□ -1.69
LRCH3-217ENST00000483442 LTFP02788 710 aa4.51□□□□□ -1.69
LRCH3-217ENST00000483442 CAPN2P17655 700 aa4.51□□□□□ -1.69
LRCH3-217ENST00000483442 PPP2R1AP30153 589 aa4.51□□□□□ -1.69
LRCH3-217ENST00000483442 IGHMBP2P38935 993 aaKnown RBP4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms