RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 EP300Q09472 2414 aaPredicted RBP15.47■□□□□ 0.07
VARS-226ENST00000483275 CLUHO75153 1309 aa15.47■□□□□ 0.07
VARS-226ENST00000483275 CARNS1A5YM72 827 aa15.47■□□□□ 0.07
VARS-226ENST00000483275 TBX3O15119 743 aa15.47■□□□□ 0.07
VARS-226ENST00000483275 USO1O60763 962 aaKnown RBP15.47■□□□□ 0.07
VARS-226ENST00000483275 SLITRK3O94933 977 aa15.47■□□□□ 0.07
VARS-226ENST00000483275 ADH1AP07327 375 aa15.47■□□□□ 0.07
VARS-226ENST00000483275 GLRA2P23416 452 aa15.47■□□□□ 0.07
VARS-226ENST00000483275 KRT2P35908 639 aa15.47■□□□□ 0.07
VARS-226ENST00000483275 KIAA0319Q5VV43 1072 aa15.47■□□□□ 0.07
VARS-226ENST00000483275 MAEAQ7L5Y9 396 aa15.47■□□□□ 0.07
VARS-226ENST00000483275 OTUD6AQ7L8S5 288 aa15.47■□□□□ 0.07
VARS-226ENST00000483275 RNF168Q8IYW5 571 aaPredicted RBP15.47■□□□□ 0.07
VARS-226ENST00000483275 FAM177A1Q8N128 213 aaPredicted RBP15.47■□□□□ 0.07
VARS-226ENST00000483275 SMG7Q92540 1137 aaKnown RBP15.47■□□□□ 0.07
VARS-226ENST00000483275 SNX27Q96L92 541 aa15.47■□□□□ 0.07
VARS-226ENST00000483275 GPR62Q9BZJ7 368 aa15.47■□□□□ 0.07
VARS-226ENST00000483275 DUSP12Q9UNI6 340 aa15.47■□□□□ 0.07
VARS-226ENST00000483275 POTEMA6NI47 508 aa15.46■□□□□ 0.07
VARS-226ENST00000483275 GAS2O43903 313 aaKnown RBP15.46■□□□□ 0.07
VARS-226ENST00000483275 EFEMP2O95967 443 aa15.46■□□□□ 0.07
VARS-226ENST00000483275 FDPSP14324 419 aaKnown RBP15.46■□□□□ 0.07
VARS-226ENST00000483275 XBP1P17861 261 aa15.46■□□□□ 0.07
VARS-226ENST00000483275 CALCRLQ16602 461 aa15.46■□□□□ 0.07
VARS-226ENST00000483275 POTEGQ6S5H5 508 aa15.46■□□□□ 0.07
VARS-226ENST00000483275 C15orf39Q6ZRI6 1047 aa15.46■□□□□ 0.07
VARS-226ENST00000483275 GET4Q7L5D6 327 aaPredicted RBP15.46■□□□□ 0.07
VARS-226ENST00000483275 SLFN12Q8IYM2 578 aa15.46■□□□□ 0.07
VARS-226ENST00000483275 ZNF707Q96C28 371 aaPredicted RBP15.46■□□□□ 0.07
VARS-226ENST00000483275 CCDC43Q96MW1 224 aaKnown RBP15.46■□□□□ 0.07
VARS-226ENST00000483275 PAAF1Q9BRP4 392 aa15.46■□□□□ 0.07
VARS-226ENST00000483275 TRIM6Q9C030 488 aaPredicted RBP15.46■□□□□ 0.07
VARS-226ENST00000483275 CXCL16Q9H2A7 254 aa15.46■□□□□ 0.07
VARS-226ENST00000483275 CA14Q9ULX7 337 aa15.46■□□□□ 0.07
VARS-226ENST00000483275 USP20Q9Y2K6 914 aa15.46■□□□□ 0.07
VARS-226ENST00000483275 PPME1Q9Y570 386 aa15.46■□□□□ 0.07
VARS-226ENST00000483275 KRBA1A5PL33 1030 aa15.45■□□□□ 0.06
VARS-226ENST00000483275 TTLL13PA6NNM8 815 aa15.45■□□□□ 0.06
VARS-226ENST00000483275 PROB1E7EW31 1015 aa15.45■□□□□ 0.06
VARS-226ENST00000483275 ASAP2O43150 1006 aa15.45■□□□□ 0.06
VARS-226ENST00000483275 JAK2O60674 1132 aa15.45■□□□□ 0.06
VARS-226ENST00000483275 BAG4O95429 457 aaKnown RBP15.45■□□□□ 0.06
VARS-226ENST00000483275 AOC1P19801 751 aa15.45■□□□□ 0.06
VARS-226ENST00000483275 NBL1P41271 181 aa15.45■□□□□ 0.06
VARS-226ENST00000483275 TXKP42681 527 aa15.45■□□□□ 0.06
VARS-226ENST00000483275 CLCN5P51795 746 aa15.45■□□□□ 0.06
VARS-226ENST00000483275 DSG1Q02413 1049 aa15.45■□□□□ 0.06
VARS-226ENST00000483275 TFDP1Q14186 410 aa15.45■□□□□ 0.06
VARS-226ENST00000483275 MXD4Q14582 209 aaPredicted RBP15.45■□□□□ 0.06
VARS-226ENST00000483275 FUT10Q6P4F1 479 aa15.45■□□□□ 0.06
VARS-226ENST00000483275 PRSS55Q6UWB4 352 aaPredicted RBP15.45■□□□□ 0.06
VARS-226ENST00000483275 EXOC8Q8IYI6 725 aa15.45■□□□□ 0.06
VARS-226ENST00000483275 GSTCDQ8NEC7 633 aa15.45■□□□□ 0.06
VARS-226ENST00000483275 RIN2Q8WYP3 895 aaPredicted RBP15.45■□□□□ 0.06
VARS-226ENST00000483275 IRF2BPLQ9H1B7 796 aa15.45■□□□□ 0.06
VARS-226ENST00000483275 TTC12Q9H892 705 aaPredicted RBP15.45■□□□□ 0.06
VARS-226ENST00000483275 WDR6Q9NNW5 1121 aaKnown RBP15.45■□□□□ 0.06
VARS-226ENST00000483275 UBN1Q9NPG3 1134 aa15.45■□□□□ 0.06
VARS-226ENST00000483275 PARP2Q9UGN5 583 aa15.45■□□□□ 0.06
VARS-226ENST00000483275 LRRIQ4A6NIV6 560 aa15.44■□□□□ 0.06
VARS-226ENST00000483275 BTBD18B2RXH4 712 aa15.44■□□□□ 0.06
VARS-226ENST00000483275 STK25O00506 426 aa15.44■□□□□ 0.06
VARS-226ENST00000483275 TGM5O43548 720 aa15.44■□□□□ 0.06
VARS-226ENST00000483275 NEMFO60524 1076 aa15.44■□□□□ 0.06
VARS-226ENST00000483275 ATP2B1P20020 1258 aa15.44■□□□□ 0.06
VARS-226ENST00000483275 AXLP30530 894 aa15.44■□□□□ 0.06
VARS-226ENST00000483275 ARL2P36404 184 aa15.44■□□□□ 0.06
VARS-226ENST00000483275 RARRES1P49788 294 aa15.44■□□□□ 0.06
VARS-226ENST00000483275 NUBP1P53384 320 aa15.44■□□□□ 0.06
VARS-226ENST00000483275 CNNM3Q8NE01 707 aa15.44■□□□□ 0.06
VARS-226ENST00000483275 CMASQ8NFW8 434 aaPredicted RBP15.44■□□□□ 0.06
VARS-226ENST00000483275 CCDC51Q96ER9 411 aa15.44■□□□□ 0.06
VARS-226ENST00000483275 NAP1L4Q99733 375 aaKnown RBP15.44■□□□□ 0.06
VARS-226ENST00000483275 HSD17B14Q9BPX1 270 aa15.44■□□□□ 0.06
VARS-226ENST00000483275 PIDD1Q9HB75 910 aa15.44■□□□□ 0.06
VARS-226ENST00000483275 RXFP1Q9HBX9 757 aa15.44■□□□□ 0.06
VARS-226ENST00000483275 PCDHA12Q9UN75 941 aa15.44■□□□□ 0.06
VARS-226ENST00000483275 MIA3Q5JRA6 1907 aa15.43■□□□□ 0.06
VARS-226ENST00000483275 CASTOR2A6NHX0 329 aa15.43■□□□□ 0.06
VARS-226ENST00000483275 EPB41L2O43491 1005 aaKnown RBP15.43■□□□□ 0.06
VARS-226ENST00000483275 DGAT1O75907 488 aa15.43■□□□□ 0.06
VARS-226ENST00000483275 LIG1P18858 919 aa15.43■□□□□ 0.06
VARS-226ENST00000483275 NTHL1P78549 312 aa15.43■□□□□ 0.06
VARS-226ENST00000483275 ANGPT1Q15389 498 aa15.43■□□□□ 0.06
VARS-226ENST00000483275 ME3Q16798 604 aa15.43■□□□□ 0.06
VARS-226ENST00000483275 RTP2Q5QGT7 225 aa15.43■□□□□ 0.06
VARS-226ENST00000483275 SLC27A1Q6PCB7 646 aa15.43■□□□□ 0.06
VARS-226ENST00000483275 IFNLR1Q8IU57 520 aaPredicted RBP15.43■□□□□ 0.06
VARS-226ENST00000483275 CCDC105Q8IYK2 499 aa15.43■□□□□ 0.06
VARS-226ENST00000483275 DTWD2Q8NBA8 298 aa15.43■□□□□ 0.06
VARS-226ENST00000483275 BSNDQ8WZ55 320 aa15.43■□□□□ 0.06
VARS-226ENST00000483275 COLEC11Q9BWP8 271 aa15.43■□□□□ 0.06
VARS-226ENST00000483275 TMEM60Q9H2L4 133 aa15.43■□□□□ 0.06
VARS-226ENST00000483275 CHST7Q9NS84 486 aa15.43■□□□□ 0.06
VARS-226ENST00000483275 STK39Q9UEW8 545 aa15.43■□□□□ 0.06
VARS-226ENST00000483275 ADAM28Q9UKQ2 775 aa15.43■□□□□ 0.06
VARS-226ENST00000483275 GIT1Q9Y2X7 761 aa15.43■□□□□ 0.06
VARS-226ENST00000483275 KIF4AO95239 1232 aa15.42■□□□□ 0.06
VARS-226ENST00000483275 LYPLA2O95372 231 aa15.42■□□□□ 0.06
VARS-226ENST00000483275 EDN1P05305 212 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms