RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 FRMD5Q7Z6J6 570 aa12.64□□□□□ -0.39
VTI1A-205ENST00000483122 GPBP1Q86WP2 473 aa12.64□□□□□ -0.39
VTI1A-205ENST00000483122 KSR1Q8IVT5 923 aa12.64□□□□□ -0.39
VTI1A-205ENST00000483122 NDNQ99608 321 aa12.64□□□□□ -0.39
VTI1A-205ENST00000483122 MIPEPQ99797 713 aa12.64□□□□□ -0.39
VTI1A-205ENST00000483122 DDX50Q9BQ39 737 aaKnown RBP12.64□□□□□ -0.39
VTI1A-205ENST00000483122 TMEM47Q9BQJ4 181 aa12.64□□□□□ -0.39
VTI1A-205ENST00000483122 STX8Q9UNK0 236 aa12.64□□□□□ -0.39
VTI1A-205ENST00000483122 STARD13Q9Y3M8 1113 aa12.64□□□□□ -0.39
VTI1A-205ENST00000483122 COL4A1P02462 1669 aa12.64□□□□□ -0.39
VTI1A-205ENST00000483122 SYNGAP1Q96PV0 1343 aa12.64□□□□□ -0.39
VTI1A-205ENST00000483122 FAM196BA6NMK8 535 aa12.63□□□□□ -0.39
VTI1A-205ENST00000483122 AKAP3O75969 853 aa12.63□□□□□ -0.39
VTI1A-205ENST00000483122 LMNAP02545 664 aaKnown RBP12.63□□□□□ -0.39
VTI1A-205ENST00000483122 CYP1A1P04798 512 aaPredicted RBP12.63□□□□□ -0.39
VTI1A-205ENST00000483122 SKIP12755 728 aa12.63□□□□□ -0.39
VTI1A-205ENST00000483122 CHRNB2P17787 502 aa12.63□□□□□ -0.39
VTI1A-205ENST00000483122 STAT1P42224 750 aa12.63□□□□□ -0.39
VTI1A-205ENST00000483122 CASP4P49662 377 aa12.63□□□□□ -0.39
VTI1A-205ENST00000483122 SCNN1BP51168 640 aa12.63□□□□□ -0.39
VTI1A-205ENST00000483122 LLGL1Q15334 1064 aa12.63□□□□□ -0.39
VTI1A-205ENST00000483122 CERKLQ49MI3 558 aaPredicted RBP12.63□□□□□ -0.39
VTI1A-205ENST00000483122 SLC27A3Q5K4L6 730 aa12.63□□□□□ -0.39
VTI1A-205ENST00000483122 SUSD4Q5VX71 490 aa12.63□□□□□ -0.39
VTI1A-205ENST00000483122 CYFIP1Q7L576 1253 aa12.63□□□□□ -0.39
VTI1A-205ENST00000483122 PRUNE1Q86TP1 453 aa12.63□□□□□ -0.39
VTI1A-205ENST00000483122 C7orf43Q8WVR3 580 aa12.63□□□□□ -0.39
VTI1A-205ENST00000483122 GATA6Q92908 595 aa12.63□□□□□ -0.39
VTI1A-205ENST00000483122 AZIN2Q96A70 460 aa12.63□□□□□ -0.39
VTI1A-205ENST00000483122 GBP5Q96PP8 586 aa12.63□□□□□ -0.39
VTI1A-205ENST00000483122 PIGSQ96S52 555 aa12.63□□□□□ -0.39
VTI1A-205ENST00000483122 RAB34Q9BZG1 259 aa12.63□□□□□ -0.39
VTI1A-205ENST00000483122 DMAP1Q9NPF5 467 aaPredicted RBP12.63□□□□□ -0.39
VTI1A-205ENST00000483122 BMP2KQ9NSY1 1161 aaPredicted RBP12.63□□□□□ -0.39
VTI1A-205ENST00000483122 SEPT11Q9NVA2 429 aaKnown RBP12.63□□□□□ -0.39
VTI1A-205ENST00000483122 NAALADL1Q9UQQ1 740 aa12.63□□□□□ -0.39
VTI1A-205ENST00000483122 NIP7Q9Y221 180 aaKnown RBP eCLIP12.63□□□□□ -0.39
VTI1A-205ENST00000483122 ZBTB1Q9Y2K1 713 aa12.63□□□□□ -0.39
VTI1A-205ENST00000483122 SPAG7O75391 227 aa12.63□□□□□ -0.39
VTI1A-205ENST00000483122 UBTFL6P0CB48 400 aaPredicted RBP12.63□□□□□ -0.39
VTI1A-205ENST00000483122 PYGMP11217 842 aa12.63□□□□□ -0.39
VTI1A-205ENST00000483122 LMNB1P20700 586 aa12.63□□□□□ -0.39
VTI1A-205ENST00000483122 MARK3P27448 753 aa12.63□□□□□ -0.39
VTI1A-205ENST00000483122 PTPN4P29074 926 aa12.63□□□□□ -0.39
VTI1A-205ENST00000483122 BAG6P46379 1132 aa12.63□□□□□ -0.39
VTI1A-205ENST00000483122 CALCOCO2Q13137 446 aa12.63□□□□□ -0.39
VTI1A-205ENST00000483122 ORC2Q13416 577 aaPredicted RBP12.63□□□□□ -0.39
VTI1A-205ENST00000483122 CNPY1Q3B7I2 92 aa12.63□□□□□ -0.39
VTI1A-205ENST00000483122 SBK1Q52WX2 424 aa12.63□□□□□ -0.39
VTI1A-205ENST00000483122 TAF1BQ53T94 588 aaPredicted RBP12.63□□□□□ -0.39
VTI1A-205ENST00000483122 TMEM63BQ5T3F8 832 aa12.63□□□□□ -0.39
VTI1A-205ENST00000483122 MIGA2Q7L4E1 593 aa12.63□□□□□ -0.39
VTI1A-205ENST00000483122 CPNE8Q86YQ8 564 aa12.63□□□□□ -0.39
VTI1A-205ENST00000483122 PTPRN2Q92932 1015 aa12.63□□□□□ -0.39
VTI1A-205ENST00000483122 DTNBP1Q96EV8 351 aa12.63□□□□□ -0.39
VTI1A-205ENST00000483122 PWWP2AQ96N64 755 aa12.63□□□□□ -0.39
VTI1A-205ENST00000483122 CHORDC1Q9UHD1 332 aaPredicted RBP12.63□□□□□ -0.39
VTI1A-205ENST00000483122 NUMBLQ9Y6R0 609 aa12.63□□□□□ -0.39
VTI1A-205ENST00000483122 PASKQ96RG2 1323 aa12.63□□□□□ -0.39
VTI1A-205ENST00000483122 MAGEA13PA6NCF6 341 aa12.62□□□□□ -0.39
VTI1A-205ENST00000483122 CREB3O43889 395 aa12.62□□□□□ -0.39
VTI1A-205ENST00000483122 PLA2G4BP0C869 781 aa12.62□□□□□ -0.39
VTI1A-205ENST00000483122 HSPA6P17066 643 aa12.62□□□□□ -0.39
VTI1A-205ENST00000483122 HOXD13P35453 343 aa12.62□□□□□ -0.39
VTI1A-205ENST00000483122 SOX5P35711 763 aa12.62□□□□□ -0.39
VTI1A-205ENST00000483122 PSMC4P43686 418 aa12.62□□□□□ -0.39
VTI1A-205ENST00000483122 IL9RQ01113 521 aa12.62□□□□□ -0.39
VTI1A-205ENST00000483122 OCRLQ01968 901 aa12.62□□□□□ -0.39
VTI1A-205ENST00000483122 PABPC1LQ4VXU2 614 aaKnown RBP12.62□□□□□ -0.39
VTI1A-205ENST00000483122 RBM26Q5T8P6 1007 aaKnown RBP12.62□□□□□ -0.39
VTI1A-205ENST00000483122 USP17L2Q6R6M4 530 aa12.62□□□□□ -0.39
VTI1A-205ENST00000483122 PPP4R3CPQ6ZMV5 832 aa12.62□□□□□ -0.39
VTI1A-205ENST00000483122 LRRC74BQ6ZQY2 392 aa12.62□□□□□ -0.39
VTI1A-205ENST00000483122 ILDR2Q71H61 639 aa12.62□□□□□ -0.39
VTI1A-205ENST00000483122 ZNF34Q8IZ26 560 aa12.62□□□□□ -0.39
VTI1A-205ENST00000483122 SLC44A5Q8NCS7 719 aa12.62□□□□□ -0.39
VTI1A-205ENST00000483122 DTX3LQ8TDB6 740 aa12.62□□□□□ -0.39
VTI1A-205ENST00000483122 C10orf82Q8WW14 230 aa12.62□□□□□ -0.39
VTI1A-205ENST00000483122 SYT11Q9BT88 431 aa12.62□□□□□ -0.39
VTI1A-205ENST00000483122 CADM1Q9BY67 442 aaKnown RBP12.62□□□□□ -0.39
VTI1A-205ENST00000483122 DHX36Q9H2U1 1008 aaKnown RBP12.62□□□□□ -0.39
VTI1A-205ENST00000483122 TLE6Q9H808 572 aa12.62□□□□□ -0.39
VTI1A-205ENST00000483122 ZWILCHQ9H900 591 aa12.62□□□□□ -0.39
VTI1A-205ENST00000483122 CCNL1Q9UK58 526 aaPredicted RBP12.62□□□□□ -0.39
VTI1A-205ENST00000483122 KIAA1024Q9UPX6 916 aa12.62□□□□□ -0.39
VTI1A-205ENST00000483122 ADGRA3Q8IWK6 1321 aa12.62□□□□□ -0.39
VTI1A-205ENST00000483122 TTC36A6NLP5 189 aa12.62□□□□□ -0.39
VTI1A-205ENST00000483122 TRAFD1O14545 582 aaPredicted RBP12.62□□□□□ -0.39
VTI1A-205ENST00000483122 DCTN3O75935 186 aa12.62□□□□□ -0.39
VTI1A-205ENST00000483122 TTC4O95801 387 aa12.62□□□□□ -0.39
VTI1A-205ENST00000483122 CYP11B2P19099 503 aa12.62□□□□□ -0.39
VTI1A-205ENST00000483122 DRAP1Q14919 205 aaPredicted RBP12.62□□□□□ -0.39
VTI1A-205ENST00000483122 SIX1Q15475 284 aaPredicted RBP12.62□□□□□ -0.39
VTI1A-205ENST00000483122 CLUL1Q15846 466 aa12.62□□□□□ -0.39
VTI1A-205ENST00000483122 ACSBG2Q5FVE4 666 aa12.62□□□□□ -0.39
VTI1A-205ENST00000483122 SEL1L2Q5TEA6 688 aa12.62□□□□□ -0.39
VTI1A-205ENST00000483122 SPTY2D1Q68D10 685 aaPredicted RBP12.62□□□□□ -0.39
VTI1A-205ENST00000483122 RHBDF2Q6PJF5 856 aa12.62□□□□□ -0.39
VTI1A-205ENST00000483122 PPP1R21Q6ZMI0 780 aa12.62□□□□□ -0.39
VTI1A-205ENST00000483122 EPM2AIP1Q7L775 607 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms