RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 COLEC11Q9BWP8 271 aa8.24□□□□□ -1.09
CSDE1-206ENST00000483030 APOL6Q9BWW8 343 aa8.24□□□□□ -1.09
CSDE1-206ENST00000483030 GPR62Q9BZJ7 368 aa8.24□□□□□ -1.09
CSDE1-206ENST00000483030 NT5C3AQ9H0P0 336 aa8.24□□□□□ -1.09
CSDE1-206ENST00000483030 PLEKHA4Q9H4M7 779 aa8.24□□□□□ -1.09
CSDE1-206ENST00000483030 CHST7Q9NS84 486 aa8.24□□□□□ -1.09
CSDE1-206ENST00000483030 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.24□□□□□ -1.09
CSDE1-206ENST00000483030 RGL1Q9NZL6 768 aa8.24□□□□□ -1.09
CSDE1-206ENST00000483030 VAV3Q9UKW4 847 aa8.24□□□□□ -1.09
CSDE1-206ENST00000483030 EP300Q09472 2414 aaPredicted RBP8.23□□□□□ -1.09
CSDE1-206ENST00000483030 MED19A0JLT2 244 aaPredicted RBP8.23□□□□□ -1.09
CSDE1-206ENST00000483030 TGM5O43548 720 aa8.23□□□□□ -1.09
CSDE1-206ENST00000483030 TSPAN1O60635 241 aa8.23□□□□□ -1.09
CSDE1-206ENST00000483030 DEXIO95424 95 aa8.23□□□□□ -1.09
CSDE1-206ENST00000483030 SP9P0CG40 484 aa8.23□□□□□ -1.09
CSDE1-206ENST00000483030 RPL17P18621 184 aaKnown RBP8.23□□□□□ -1.09
CSDE1-206ENST00000483030 PSMA5P28066 241 aa8.23□□□□□ -1.09
CSDE1-206ENST00000483030 YWHABP31946 246 aaKnown RBP8.23□□□□□ -1.09
CSDE1-206ENST00000483030 PTENP60484 403 aa8.23□□□□□ -1.09
CSDE1-206ENST00000483030 GPC5P78333 572 aa8.23□□□□□ -1.09
CSDE1-206ENST00000483030 NCBP1Q09161 790 aaKnown RBP8.23□□□□□ -1.09
CSDE1-206ENST00000483030 EMC2Q15006 297 aa8.23□□□□□ -1.09
CSDE1-206ENST00000483030 EPHA7Q15375 998 aa8.23□□□□□ -1.09
CSDE1-206ENST00000483030 NPY5RQ15761 445 aa8.23□□□□□ -1.09
CSDE1-206ENST00000483030 XKR9Q5GH70 373 aa8.23□□□□□ -1.09
CSDE1-206ENST00000483030 PHLDB3Q6NSJ2 640 aa8.23□□□□□ -1.09
CSDE1-206ENST00000483030 LILRA6Q6PI73 481 aa8.23□□□□□ -1.09
CSDE1-206ENST00000483030 DCLRE1AQ6PJP8 1040 aa8.23□□□□□ -1.09
CSDE1-206ENST00000483030 GET4Q7L5D6 327 aaPredicted RBP8.23□□□□□ -1.09
CSDE1-206ENST00000483030 OTUD6AQ7L8S5 288 aa8.23□□□□□ -1.09
CSDE1-206ENST00000483030 DGLUCYQ7Z3D6 616 aa8.23□□□□□ -1.09
CSDE1-206ENST00000483030 KRT25Q7Z3Z0 450 aa8.23□□□□□ -1.09
CSDE1-206ENST00000483030 C1orf210Q8IVY1 113 aa8.23□□□□□ -1.09
CSDE1-206ENST00000483030 C4orf19Q8IY42 314 aa8.23□□□□□ -1.09
CSDE1-206ENST00000483030 DCLK2Q8N568 766 aa8.23□□□□□ -1.09
CSDE1-206ENST00000483030 DAGLBQ8NCG7 672 aa8.23□□□□□ -1.09
CSDE1-206ENST00000483030 HDAC7Q8WUI4 952 aa8.23□□□□□ -1.09
CSDE1-206ENST00000483030 RABGGTAQ92696 567 aa8.23□□□□□ -1.09
CSDE1-206ENST00000483030 HINFPQ9BQA5 517 aa8.23□□□□□ -1.09
CSDE1-206ENST00000483030 RPP25Q9BUL9 199 aaKnown RBP8.23□□□□□ -1.09
CSDE1-206ENST00000483030 PRKD2Q9BZL6 878 aa8.23□□□□□ -1.09
CSDE1-206ENST00000483030 FOXQ1Q9C009 403 aa8.23□□□□□ -1.09
CSDE1-206ENST00000483030 CSRNP2Q9H175 543 aa8.23□□□□□ -1.09
CSDE1-206ENST00000483030 KCNMB3Q9NPA1 279 aa8.23□□□□□ -1.09
CSDE1-206ENST00000483030 ARHGEF3Q9NR81 526 aa8.23□□□□□ -1.09
CSDE1-206ENST00000483030 ZDHHC7Q9NXF8 308 aa8.23□□□□□ -1.09
CSDE1-206ENST00000483030 DLGAP2Q9P1A6 1054 aa8.23□□□□□ -1.09
CSDE1-206ENST00000483030 KCNJ14Q9UNX9 436 aa8.23□□□□□ -1.09
CSDE1-206ENST00000483030 PPME1Q9Y570 386 aa8.23□□□□□ -1.09
CSDE1-206ENST00000483030 NUMBLQ9Y6R0 609 aa8.23□□□□□ -1.09
CSDE1-206ENST00000483030 MYH9P35579 1960 aaKnown RBP8.22□□□□□ -1.09
CSDE1-206ENST00000483030 CCDC194A0A1B0GVG4 234 aa8.22□□□□□ -1.09
CSDE1-206ENST00000483030 ANHXE9PGG2 379 aa8.22□□□□□ -1.09
CSDE1-206ENST00000483030 INO80B-WBP1J3KQ70 363 aa8.22□□□□□ -1.09
CSDE1-206ENST00000483030 CPLX1O14810 134 aa8.22□□□□□ -1.09
CSDE1-206ENST00000483030 MARCH6O60337 910 aa8.22□□□□□ -1.09
CSDE1-206ENST00000483030 LRRN2O75325 713 aa8.22□□□□□ -1.09
CSDE1-206ENST00000483030 TADA2AO75478 443 aa8.22□□□□□ -1.09
CSDE1-206ENST00000483030 PAPLNO95428 1278 aa8.22□□□□□ -1.09
CSDE1-206ENST00000483030 C1RP00736 705 aa8.22□□□□□ -1.09
CSDE1-206ENST00000483030 PRR29P0C7W0 189 aa8.22□□□□□ -1.09
CSDE1-206ENST00000483030 GLULP15104 373 aa8.22□□□□□ -1.09
CSDE1-206ENST00000483030 AKAP5P24588 427 aa8.22□□□□□ -1.09
CSDE1-206ENST00000483030 AXLP30530 894 aa8.22□□□□□ -1.09
CSDE1-206ENST00000483030 HTR4Q13639 388 aa8.22□□□□□ -1.09
CSDE1-206ENST00000483030 CTTNQ14247 550 aaKnown RBP8.22□□□□□ -1.09
CSDE1-206ENST00000483030 USP41Q3LFD5 358 aa8.22□□□□□ -1.09
CSDE1-206ENST00000483030 GALNT17Q6IS24 598 aa8.22□□□□□ -1.09
CSDE1-206ENST00000483030 FUT10Q6P4F1 479 aa8.22□□□□□ -1.09
CSDE1-206ENST00000483030 NOTUMQ6P988 496 aa8.22□□□□□ -1.09
CSDE1-206ENST00000483030 ZC3H14Q6PJT7 736 aaKnown RBP8.22□□□□□ -1.09
CSDE1-206ENST00000483030 PRSS55Q6UWB4 352 aaPredicted RBP8.22□□□□□ -1.09
CSDE1-206ENST00000483030 CDR2LQ86X02 465 aaPredicted RBP8.22□□□□□ -1.09
CSDE1-206ENST00000483030 TPH2Q8IWU9 490 aa8.22□□□□□ -1.09
CSDE1-206ENST00000483030 GSTCDQ8NEC7 633 aa8.22□□□□□ -1.09
CSDE1-206ENST00000483030 RUBCNQ92622 972 aa8.22□□□□□ -1.09
CSDE1-206ENST00000483030 HAS1Q92839 578 aa8.22□□□□□ -1.09
CSDE1-206ENST00000483030 CCDC51Q96ER9 411 aa8.22□□□□□ -1.09
CSDE1-206ENST00000483030 DYDC2Q96IM9 177 aa8.22□□□□□ -1.09
CSDE1-206ENST00000483030 LXNQ9BS40 222 aa8.22□□□□□ -1.09
CSDE1-206ENST00000483030 TRIM6Q9C030 488 aaPredicted RBP8.22□□□□□ -1.09
CSDE1-206ENST00000483030 NXF3Q9H4D5 531 aaKnown RBP8.22□□□□□ -1.09
CSDE1-206ENST00000483030 ZSWIM4Q9H7M6 989 aa8.22□□□□□ -1.09
CSDE1-206ENST00000483030 XPNPEP1Q9NQW7 623 aa8.22□□□□□ -1.09
CSDE1-206ENST00000483030 SLC2A4RGQ9NR83 387 aa8.22□□□□□ -1.09
CSDE1-206ENST00000483030 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.22□□□□□ -1.09
CSDE1-206ENST00000483030 KLK14Q9P0G3 267 aa8.22□□□□□ -1.09
CSDE1-206ENST00000483030 FNIP2Q9P278 1114 aa8.22□□□□□ -1.09
CSDE1-206ENST00000483030 CACNG4Q9UBN1 327 aa8.22□□□□□ -1.09
CSDE1-206ENST00000483030 GIT1Q9Y2X7 761 aa8.22□□□□□ -1.09
CSDE1-206ENST00000483030 DMDP11532 3685 aa8.21□□□□□ -1.09
CSDE1-206ENST00000483030 CCNT1O60563 726 aaKnown RBP8.21□□□□□ -1.1
CSDE1-206ENST00000483030 ZMYND10O75800 440 aa8.21□□□□□ -1.1
CSDE1-206ENST00000483030 SLITRK3O94933 977 aa8.21□□□□□ -1.1
CSDE1-206ENST00000483030 CHRM1P11229 460 aaPredicted RBP8.21□□□□□ -1.1
CSDE1-206ENST00000483030 ARF4P18085 180 aaPredicted RBP8.21□□□□□ -1.1
CSDE1-206ENST00000483030 FSHRP23945 695 aa8.21□□□□□ -1.1
CSDE1-206ENST00000483030 STARD6P59095 220 aa8.21□□□□□ -1.1
CSDE1-206ENST00000483030 NTHL1P78549 312 aa8.21□□□□□ -1.1
CSDE1-206ENST00000483030 CYP4A11Q02928 519 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms