RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, humanhuman

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-206ENST00000482771 C4orf19Q8IY42 314 aa14.29□□□□□ -0.12
TMEM54-206ENST00000482771 DAGLBQ8NCG7 672 aa14.29□□□□□ -0.12
TMEM54-206ENST00000482771 RABGGTAQ92696 567 aa14.29□□□□□ -0.12
TMEM54-206ENST00000482771 AIFM3Q96NN9 605 aa14.29□□□□□ -0.12
TMEM54-206ENST00000482771 HINFPQ9BQA5 517 aa14.29□□□□□ -0.12
TMEM54-206ENST00000482771 LARP6Q9BRS8 491 aaKnown RBP14.29□□□□□ -0.12
TMEM54-206ENST00000482771 RPP25Q9BUL9 199 aaKnown RBP14.29□□□□□ -0.12
TMEM54-206ENST00000482771 ARHGEF3Q9NR81 526 aa14.29□□□□□ -0.12
TMEM54-206ENST00000482771 DLGAP2Q9P1A6 1054 aa14.29□□□□□ -0.12
TMEM54-206ENST00000482771 MED19A0JLT2 244 aaPredicted RBP14.28□□□□□ -0.12
TMEM54-206ENST00000482771 ANHXE9PGG2 379 aa14.28□□□□□ -0.12
TMEM54-206ENST00000482771 CPLX1O14810 134 aa14.28□□□□□ -0.12
TMEM54-206ENST00000482771 TSPAN1O60635 241 aa14.28□□□□□ -0.12
TMEM54-206ENST00000482771 C1RP00736 705 aa14.28□□□□□ -0.12
TMEM54-206ENST00000482771 AXLP30530 894 aa14.28□□□□□ -0.12
TMEM54-206ENST00000482771 PTENP60484 403 aa14.28□□□□□ -0.12
TMEM54-206ENST00000482771 GPC5P78333 572 aa14.28□□□□□ -0.12
TMEM54-206ENST00000482771 HTR4Q13639 388 aa14.28□□□□□ -0.12
TMEM54-206ENST00000482771 CTTNQ14247 550 aaKnown RBP14.28□□□□□ -0.12
TMEM54-206ENST00000482771 EMC2Q15006 297 aa14.28□□□□□ -0.12
TMEM54-206ENST00000482771 NPY5RQ15761 445 aa14.28□□□□□ -0.12
TMEM54-206ENST00000482771 NOTUMQ6P988 496 aa14.28□□□□□ -0.12
TMEM54-206ENST00000482771 GET4Q7L5D6 327 aaPredicted RBP14.28□□□□□ -0.12
TMEM54-206ENST00000482771 KRT25Q7Z3Z0 450 aa14.28□□□□□ -0.12
TMEM54-206ENST00000482771 DENND4AQ7Z401 1863 aa14.28□□□□□ -0.12
TMEM54-206ENST00000482771 DCLK2Q8N568 766 aa14.28□□□□□ -0.12
TMEM54-206ENST00000482771 FOXQ1Q9C009 403 aa14.28□□□□□ -0.12
TMEM54-206ENST00000482771 CSRNP2Q9H175 543 aa14.28□□□□□ -0.12
TMEM54-206ENST00000482771 KCNMB3Q9NPA1 279 aa14.28□□□□□ -0.12
TMEM54-206ENST00000482771 SLC2A4RGQ9NR83 387 aa14.28□□□□□ -0.12
TMEM54-206ENST00000482771 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.28□□□□□ -0.12
TMEM54-206ENST00000482771 ZDHHC7Q9NXF8 308 aa14.28□□□□□ -0.12
TMEM54-206ENST00000482771 FNIP2Q9P278 1114 aa14.28□□□□□ -0.12
TMEM54-206ENST00000482771 KCNJ14Q9UNX9 436 aa14.28□□□□□ -0.12
TMEM54-206ENST00000482771 GIT1Q9Y2X7 761 aa14.28□□□□□ -0.12
TMEM54-206ENST00000482771 NUMBLQ9Y6R0 609 aa14.28□□□□□ -0.12
TMEM54-206ENST00000482771 INO80B-WBP1J3KQ70 363 aa14.27□□□□□ -0.13
TMEM54-206ENST00000482771 LRRN2O75325 713 aa14.27□□□□□ -0.13
TMEM54-206ENST00000482771 TADA2AO75478 443 aa14.27□□□□□ -0.13
TMEM54-206ENST00000482771 PAPLNO95428 1278 aa14.27□□□□□ -0.13
TMEM54-206ENST00000482771 GLULP15104 373 aa14.27□□□□□ -0.13
TMEM54-206ENST00000482771 FSHRP23945 695 aa14.27□□□□□ -0.13
TMEM54-206ENST00000482771 AKAP5P24588 427 aa14.27□□□□□ -0.13
TMEM54-206ENST00000482771 MXD4Q14582 209 aaPredicted RBP14.27□□□□□ -0.13
TMEM54-206ENST00000482771 PUM1Q14671 1186 aaKnown RBP eCLIP14.27□□□□□ -0.13
TMEM54-206ENST00000482771 PCBP1Q15365 356 aaKnown RBP eCLIP14.27□□□□□ -0.13
TMEM54-206ENST00000482771 FUT10Q6P4F1 479 aa14.27□□□□□ -0.13
TMEM54-206ENST00000482771 ZC3H14Q6PJT7 736 aaKnown RBP14.27□□□□□ -0.13
TMEM54-206ENST00000482771 TPH2Q8IWU9 490 aa14.27□□□□□ -0.13
TMEM54-206ENST00000482771 GSTCDQ8NEC7 633 aa14.27□□□□□ -0.13
TMEM54-206ENST00000482771 RUBCNQ92622 972 aa14.27□□□□□ -0.13
TMEM54-206ENST00000482771 HAS1Q92839 578 aa14.27□□□□□ -0.13
TMEM54-206ENST00000482771 CCDC51Q96ER9 411 aa14.27□□□□□ -0.13
TMEM54-206ENST00000482771 DYDC2Q96IM9 177 aa14.27□□□□□ -0.13
TMEM54-206ENST00000482771 SHDQ96IW2 340 aa14.27□□□□□ -0.13
TMEM54-206ENST00000482771 MTRQ99707 1265 aa14.27□□□□□ -0.13
TMEM54-206ENST00000482771 LXNQ9BS40 222 aa14.27□□□□□ -0.13
TMEM54-206ENST00000482771 TRIM6Q9C030 488 aaPredicted RBP14.27□□□□□ -0.13
TMEM54-206ENST00000482771 ZSWIM4Q9H7M6 989 aa14.27□□□□□ -0.13
TMEM54-206ENST00000482771 KLK14Q9P0G3 267 aa14.27□□□□□ -0.13
TMEM54-206ENST00000482771 DOCK8Q8NF50 2099 aa14.27□□□□□ -0.13
TMEM54-206ENST00000482771 CCDC194A0A1B0GVG4 234 aa14.26□□□□□ -0.13
TMEM54-206ENST00000482771 POTEMA6NI47 508 aa14.26□□□□□ -0.13
TMEM54-206ENST00000482771 CCNT1O60563 726 aaKnown RBP14.26□□□□□ -0.13
TMEM54-206ENST00000482771 ZMYND10O75800 440 aa14.26□□□□□ -0.13
TMEM54-206ENST00000482771 SLITRK3O94933 977 aa14.26□□□□□ -0.13
TMEM54-206ENST00000482771 STARD6P59095 220 aa14.26□□□□□ -0.13
TMEM54-206ENST00000482771 STK3Q13188 491 aa14.26□□□□□ -0.13
TMEM54-206ENST00000482771 SNW1Q13573 536 aaKnown RBP14.26□□□□□ -0.13
TMEM54-206ENST00000482771 TOB2Q14106 344 aaPredicted RBP14.26□□□□□ -0.13
TMEM54-206ENST00000482771 TFDP1Q14186 410 aa14.26□□□□□ -0.13
TMEM54-206ENST00000482771 NCAPH2Q6IBW4 605 aa14.26□□□□□ -0.13
TMEM54-206ENST00000482771 PPP4R3AQ6IN85 833 aa14.26□□□□□ -0.13
TMEM54-206ENST00000482771 PRSS55Q6UWB4 352 aaPredicted RBP14.26□□□□□ -0.13
TMEM54-206ENST00000482771 PARM1Q6UWI2 310 aa14.26□□□□□ -0.13
TMEM54-206ENST00000482771 GRASPQ7Z6J2 395 aaPredicted RBP14.26□□□□□ -0.13
TMEM54-206ENST00000482771 CDR2LQ86X02 465 aaPredicted RBP14.26□□□□□ -0.13
TMEM54-206ENST00000482771 GPR65Q8IYL9 337 aa14.26□□□□□ -0.13
TMEM54-206ENST00000482771 HACE1Q8IYU2 909 aa14.26□□□□□ -0.13
TMEM54-206ENST00000482771 NXF3Q9H4D5 531 aaKnown RBP14.26□□□□□ -0.13
TMEM54-206ENST00000482771 XPNPEP1Q9NQW7 623 aa14.26□□□□□ -0.13
TMEM54-206ENST00000482771 PARP2Q9UGN5 583 aa14.26□□□□□ -0.13
TMEM54-206ENST00000482771 ADAM28Q9UKQ2 775 aa14.26□□□□□ -0.13
TMEM54-206ENST00000482771 ZFP37Q9Y6Q3 630 aaPredicted RBP14.26□□□□□ -0.13
TMEM54-206ENST00000482771 DOCK6Q96HP0 2047 aa14.25□□□□□ -0.13
TMEM54-206ENST00000482771 CACNA1BQ00975 2339 aa14.25□□□□□ -0.13
TMEM54-206ENST00000482771 DMXL1Q9Y485 3027 aa14.25□□□□□ -0.13
TMEM54-206ENST00000482771 ARF4P18085 180 aaPredicted RBP14.25□□□□□ -0.13
TMEM54-206ENST00000482771 NTHL1P78549 312 aa14.25□□□□□ -0.13
TMEM54-206ENST00000482771 CYP4A11Q02928 519 aa14.25□□□□□ -0.13
TMEM54-206ENST00000482771 MBTD1Q05BQ5 628 aa14.25□□□□□ -0.13
TMEM54-206ENST00000482771 AMHR2Q16671 573 aa14.25□□□□□ -0.13
TMEM54-206ENST00000482771 CPLX2Q6PUV4 134 aaKnown RBP14.25□□□□□ -0.13
TMEM54-206ENST00000482771 RUFY3Q7L099 469 aa14.25□□□□□ -0.13
TMEM54-206ENST00000482771 NEK8Q86SG6 692 aa14.25□□□□□ -0.13
TMEM54-206ENST00000482771 MAML2Q8IZL2 1156 aaPredicted RBP14.25□□□□□ -0.13
TMEM54-206ENST00000482771 PJA1Q8NG27 643 aa14.25□□□□□ -0.13
TMEM54-206ENST00000482771 FGF14Q92915 247 aa14.25□□□□□ -0.13
TMEM54-206ENST00000482771 ZNF274Q96GC6 653 aaPredicted RBP14.25□□□□□ -0.13
TMEM54-206ENST00000482771 CACNG4Q9UBN1 327 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms