RNA–Protein interactions for RNA: ENST00000482541.2

CCNC-204, Transcript of cyclin C, humanhuman

TSL 1 (best) BASIC

Gene CCNC, Length 1,704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-204ENST00000482541 RSAD1Q9HA92 442 aa8.6□□□□□ -1.03
CCNC-204ENST00000482541 BARX2Q9UMQ3 279 aaPredicted RBP8.6□□□□□ -1.03
CCNC-204ENST00000482541 KIF3AQ9Y496 699 aa8.6□□□□□ -1.03
CCNC-204ENST00000482541 SPTBN5Q9NRC6 3674 aaKnown RBP8.6□□□□□ -1.03
CCNC-204ENST00000482541 C2orf71A6NGG8 1288 aa8.6□□□□□ -1.03
CCNC-204ENST00000482541 MEIS3P2A8K0S8 358 aa8.6□□□□□ -1.03
CCNC-204ENST00000482541 NT5C1B-RDH14C9J2C7 533 aa8.6□□□□□ -1.03
CCNC-204ENST00000482541 INPPL1O15357 1258 aa8.6□□□□□ -1.03
CCNC-204ENST00000482541 TSPAN1O60635 241 aa8.6□□□□□ -1.03
CCNC-204ENST00000482541 ZC3H11AO75152 810 aaKnown RBP eCLIP8.6□□□□□ -1.03
CCNC-204ENST00000482541 MED24O75448 989 aa8.6□□□□□ -1.03
CCNC-204ENST00000482541 CXCL14O95715 111 aa8.6□□□□□ -1.03
CCNC-204ENST00000482541 ITGA4P13612 1032 aa8.6□□□□□ -1.03
CCNC-204ENST00000482541 GLRA2P23416 452 aa8.6□□□□□ -1.03
CCNC-204ENST00000482541 CAPSQ13938 189 aa8.6□□□□□ -1.03
CCNC-204ENST00000482541 LONRF3Q496Y0 759 aa8.6□□□□□ -1.03
CCNC-204ENST00000482541 PLPP4Q5VZY2 271 aa8.6□□□□□ -1.03
CCNC-204ENST00000482541 HAUS3Q68CZ6 603 aa8.6□□□□□ -1.03
CCNC-204ENST00000482541 VPS52Q8N1B4 723 aa8.6□□□□□ -1.03
CCNC-204ENST00000482541 C4orf32Q8N8J7 132 aa8.6□□□□□ -1.03
CCNC-204ENST00000482541 IGSF21Q96ID5 467 aa8.6□□□□□ -1.03
CCNC-204ENST00000482541 FAM193BQ96PV7 902 aaPredicted RBP8.6□□□□□ -1.03
CCNC-204ENST00000482541 TMEM175Q9BSA9 504 aa8.6□□□□□ -1.03
CCNC-204ENST00000482541 LRFN3Q9BTN0 628 aa8.6□□□□□ -1.03
CCNC-204ENST00000482541 CSRNP2Q9H175 543 aa8.6□□□□□ -1.03
CCNC-204ENST00000482541 UPF2Q9HAU5 1272 aaKnown RBP8.6□□□□□ -1.03
CCNC-204ENST00000482541 INPP5FQ9Y2H2 1132 aa8.6□□□□□ -1.03
CCNC-204ENST00000482541 A0A087WWV3 80 aa8.59□□□□□ -1.03
CCNC-204ENST00000482541 A0A1B0GUA9 196 aa8.59□□□□□ -1.03
CCNC-204ENST00000482541 HIDE1A8MVS5 230 aa8.59□□□□□ -1.03
CCNC-204ENST00000482541 TK2O00142 265 aa8.59□□□□□ -1.03
CCNC-204ENST00000482541 LAD1O00515 517 aa8.59□□□□□ -1.03
CCNC-204ENST00000482541 DCXO43602 365 aa8.59□□□□□ -1.03
CCNC-204ENST00000482541 USO1O60763 962 aaKnown RBP8.59□□□□□ -1.03
CCNC-204ENST00000482541 CTSAP10619 480 aa8.59□□□□□ -1.03
CCNC-204ENST00000482541 ARF4P18085 180 aaPredicted RBP8.59□□□□□ -1.03
CCNC-204ENST00000482541 CYP11B2P19099 503 aa8.59□□□□□ -1.03
CCNC-204ENST00000482541 MCM2P49736 904 aa8.59□□□□□ -1.03
CCNC-204ENST00000482541 MBTD1Q05BQ5 628 aa8.59□□□□□ -1.03
CCNC-204ENST00000482541 ANKRD54Q6NXT1 300 aa8.59□□□□□ -1.03
CCNC-204ENST00000482541 ZNF280BQ86YH2 543 aa8.59□□□□□ -1.03
CCNC-204ENST00000482541 HACE1Q8IYU2 909 aa8.59□□□□□ -1.03
CCNC-204ENST00000482541 SMG8Q8ND04 991 aaKnown RBP8.59□□□□□ -1.03
CCNC-204ENST00000482541 VN1R2Q8NFZ6 395 aa8.59□□□□□ -1.03
CCNC-204ENST00000482541 ASAP3Q8TDY4 903 aa8.59□□□□□ -1.03
CCNC-204ENST00000482541 SUSD6Q92537 303 aa8.59□□□□□ -1.03
CCNC-204ENST00000482541 CASP10Q92851 521 aa8.59□□□□□ -1.03
CCNC-204ENST00000482541 POM121Q96HA1 1249 aa8.59□□□□□ -1.03
CCNC-204ENST00000482541 PRIMPOLQ96LW4 560 aa8.59□□□□□ -1.03
CCNC-204ENST00000482541 PHF7Q9BWX1 381 aaPredicted RBP8.59□□□□□ -1.03
CCNC-204ENST00000482541 RAB34Q9BZG1 259 aa8.59□□□□□ -1.03
CCNC-204ENST00000482541 POLR3FQ9H1D9 316 aaPredicted RBP8.59□□□□□ -1.03
CCNC-204ENST00000482541 S1PR5Q9H228 398 aa8.59□□□□□ -1.03
CCNC-204ENST00000482541 FAN1Q9Y2M0 1017 aa8.59□□□□□ -1.03
CCNC-204ENST00000482541 USP15Q9Y4E8 981 aaPredicted RBP8.59□□□□□ -1.03
CCNC-204ENST00000482541 IPPQ9Y573 584 aa8.59□□□□□ -1.03
CCNC-204ENST00000482541 MUC3AQ02505 3323 aa8.59□□□□□ -1.03
CCNC-204ENST00000482541 PRR33A8MZF0 331 aa8.58□□□□□ -1.04
CCNC-204ENST00000482541 DDHD2O94830 711 aa8.58□□□□□ -1.04
CCNC-204ENST00000482541 PRPHP41219 470 aa8.58□□□□□ -1.04
CCNC-204ENST00000482541 SLC11A1P49279 550 aa8.58□□□□□ -1.04
CCNC-204ENST00000482541 TOB1P50616 345 aaPredicted RBP8.58□□□□□ -1.04
CCNC-204ENST00000482541 RBM10P98175 930 aaKnown RBP8.58□□□□□ -1.04
CCNC-204ENST00000482541 ITIH3Q06033 890 aa8.58□□□□□ -1.04
CCNC-204ENST00000482541 FAM187BQ17R55 369 aa8.58□□□□□ -1.04
CCNC-204ENST00000482541 SYCE2Q6PIF2 218 aa8.58□□□□□ -1.04
CCNC-204ENST00000482541 TMEM173Q86WV6 379 aaPredicted RBP8.58□□□□□ -1.04
CCNC-204ENST00000482541 TMEM87AQ8NBN3 555 aa8.58□□□□□ -1.04
CCNC-204ENST00000482541 CPB2Q96IY4 423 aa8.58□□□□□ -1.04
CCNC-204ENST00000482541 ZFRQ96KR1 1074 aaKnown RBP8.58□□□□□ -1.04
CCNC-204ENST00000482541 TRIM6Q9C030 488 aaPredicted RBP8.58□□□□□ -1.04
CCNC-204ENST00000482541 ZBP1Q9H171 429 aa8.58□□□□□ -1.04
CCNC-204ENST00000482541 C2orf40Q9H1Z8 148 aa8.58□□□□□ -1.04
CCNC-204ENST00000482541 C11orf16Q9NQ32 467 aa8.58□□□□□ -1.04
CCNC-204ENST00000482541 PRMT7Q9NVM4 692 aaPredicted RBP8.58□□□□□ -1.04
CCNC-204ENST00000482541 DNAJB4Q9UDY4 337 aa8.58□□□□□ -1.04
CCNC-204ENST00000482541 LRWD1Q9UFC0 647 aa8.58□□□□□ -1.04
CCNC-204ENST00000482541 GIT1Q9Y2X7 761 aa8.58□□□□□ -1.04
CCNC-204ENST00000482541 HCFC2Q9Y5Z7 792 aa8.58□□□□□ -1.04
CCNC-204ENST00000482541 ARHGEF35A5YM69 484 aa8.57□□□□□ -1.04
CCNC-204ENST00000482541 ARL5CA6NH57 179 aa8.57□□□□□ -1.04
CCNC-204ENST00000482541 LRRIQ4A6NIV6 560 aa8.57□□□□□ -1.04
CCNC-204ENST00000482541 LOC730098B7Z3J9 87 aa8.57□□□□□ -1.04
CCNC-204ENST00000482541 NRP1O14786 923 aa8.57□□□□□ -1.04
CCNC-204ENST00000482541 CLASP2O75122 1294 aaKnown RBP8.57□□□□□ -1.04
CCNC-204ENST00000482541 POMCP01189 267 aa8.57□□□□□ -1.04
CCNC-204ENST00000482541 CCT6AP40227 531 aaKnown RBP8.57□□□□□ -1.04
CCNC-204ENST00000482541 NAMPTP43490 491 aa8.57□□□□□ -1.04
CCNC-204ENST00000482541 AFF1P51825 1210 aaKnown RBP8.57□□□□□ -1.04
CCNC-204ENST00000482541 GUCA2AQ02747 115 aa8.57□□□□□ -1.04
CCNC-204ENST00000482541 CBX2Q14781 532 aaPredicted RBP8.57□□□□□ -1.04
CCNC-204ENST00000482541 PPP2R5AQ15172 486 aa8.57□□□□□ -1.04
CCNC-204ENST00000482541 RILPL1Q5EBL4 403 aa8.57□□□□□ -1.04
CCNC-204ENST00000482541 HERC4Q5GLZ8 1057 aaPredicted RBP8.57□□□□□ -1.04
CCNC-204ENST00000482541 CDCA2Q69YH5 1023 aaPredicted RBP8.57□□□□□ -1.04
CCNC-204ENST00000482541 CES5AQ6NT32 575 aa8.57□□□□□ -1.04
CCNC-204ENST00000482541 SLC27A1Q6PCB7 646 aa8.57□□□□□ -1.04
CCNC-204ENST00000482541 MAEAQ7L5Y9 396 aa8.57□□□□□ -1.04
CCNC-204ENST00000482541 PPFIBP1Q86W92 1011 aa8.57□□□□□ -1.04
CCNC-204ENST00000482541 RNF135Q8IUD6 432 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms