RNA–Protein interactions for RNA: ENST00000482140.5

OPTN-210, Transcript of optineurin, humanhuman

TSL 3

Gene OPTN, Length 667 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-210ENST00000482140 NECAB3Q96P71 396 aaPredicted RBP16.31■□□□□ 0.2
OPTN-210ENST00000482140 TMEM134Q9H6X4 195 aa16.31■□□□□ 0.2
OPTN-210ENST00000482140 KLK14Q9P0G3 267 aa16.31■□□□□ 0.2
OPTN-210ENST00000482140 DAXXQ9UER7 740 aaPredicted RBP16.31■□□□□ 0.2
OPTN-210ENST00000482140 USP20Q9Y2K6 914 aa16.31■□□□□ 0.2
OPTN-210ENST00000482140 ZMYM2Q9UBW7 1377 aa16.3■□□□□ 0.2
OPTN-210ENST00000482140 TNFRSF10AO00220 468 aa16.3■□□□□ 0.2
OPTN-210ENST00000482140 INPPL1O15357 1258 aa16.3■□□□□ 0.2
OPTN-210ENST00000482140 SLC16A4O15374 487 aa16.3■□□□□ 0.2
OPTN-210ENST00000482140 TBX10O75333 385 aa16.3■□□□□ 0.2
OPTN-210ENST00000482140 KRT18P05783 430 aaKnown RBP16.3■□□□□ 0.2
OPTN-210ENST00000482140 PLS3P13797 630 aa16.3■□□□□ 0.2
OPTN-210ENST00000482140 LTBRP36941 435 aa16.3■□□□□ 0.2
OPTN-210ENST00000482140 DUSP6Q16828 381 aa16.3■□□□□ 0.2
OPTN-210ENST00000482140 SPECC1Q5M775 1068 aa16.3■□□□□ 0.2
OPTN-210ENST00000482140 EEF1DP3Q658K8 133 aa16.3■□□□□ 0.2
OPTN-210ENST00000482140 DDX53Q86TM3 631 aaKnown RBP16.3■□□□□ 0.2
OPTN-210ENST00000482140 TMEM173Q86WV6 379 aaPredicted RBP16.3■□□□□ 0.2
OPTN-210ENST00000482140 RAD54LQ92698 747 aa16.3■□□□□ 0.2
OPTN-210ENST00000482140 ZNF396Q96N95 335 aaPredicted RBP16.3■□□□□ 0.2
OPTN-210ENST00000482140 USP28Q96RU2 1077 aa16.3■□□□□ 0.2
OPTN-210ENST00000482140 MRPL4Q9BYD3 311 aaKnown RBP16.3■□□□□ 0.2
OPTN-210ENST00000482140 CCSER1Q9C0I3 900 aa16.3■□□□□ 0.2
OPTN-210ENST00000482140 SNTG2Q9NY99 539 aa16.3■□□□□ 0.2
OPTN-210ENST00000482140 LARSQ9P2J5 1176 aaKnown RBP16.3■□□□□ 0.2
OPTN-210ENST00000482140 ARHGAP28Q9P2N2 729 aa16.3■□□□□ 0.2
OPTN-210ENST00000482140 STK39Q9UEW8 545 aa16.3■□□□□ 0.2
OPTN-210ENST00000482140 CCDC39Q9UFE4 941 aa16.3■□□□□ 0.2
OPTN-210ENST00000482140 CD207Q9UJ71 328 aa16.3■□□□□ 0.2
OPTN-210ENST00000482140 FBXO2Q9UK22 296 aaPredicted RBP16.3■□□□□ 0.2
OPTN-210ENST00000482140 PRG3Q9Y2Y8 225 aaPredicted RBP16.3■□□□□ 0.2
OPTN-210ENST00000482140 SRPRBQ9Y5M8 271 aaKnown RBP16.3■□□□□ 0.2
OPTN-210ENST00000482140 NPHP3-ACAD11A0A0J9YXS1 232 aa16.29■□□□□ 0.2
OPTN-210ENST00000482140 GRXCR2A6NFK2 248 aa16.29■□□□□ 0.2
OPTN-210ENST00000482140 HIDE1A8MVS5 230 aa16.29■□□□□ 0.2
OPTN-210ENST00000482140 NRP1O14786 923 aa16.29■□□□□ 0.2
OPTN-210ENST00000482140 B4GALT3O60512 393 aa16.29■□□□□ 0.2
OPTN-210ENST00000482140 CXCL14O95715 111 aa16.29■□□□□ 0.2
OPTN-210ENST00000482140 EDN1P05305 212 aa16.29■□□□□ 0.2
OPTN-210ENST00000482140 CACNB1Q02641 598 aaPredicted RBP16.29■□□□□ 0.2
OPTN-210ENST00000482140 DLX2Q07687 328 aaPredicted RBP16.29■□□□□ 0.2
OPTN-210ENST00000482140 GRIK3Q13003 919 aa16.29■□□□□ 0.2
OPTN-210ENST00000482140 STRN3Q13033 797 aa16.29■□□□□ 0.2
OPTN-210ENST00000482140 MCM6Q14566 821 aa16.29■□□□□ 0.2
OPTN-210ENST00000482140 STK38Q15208 465 aa16.29■□□□□ 0.2
OPTN-210ENST00000482140 NT5DC1Q5TFE4 455 aa16.29■□□□□ 0.2
OPTN-210ENST00000482140 FOXD4L5Q5VV16 416 aaPredicted RBP16.29■□□□□ 0.2
OPTN-210ENST00000482140 COLGALT2Q8IYK4 626 aa16.29■□□□□ 0.2
OPTN-210ENST00000482140 SPRYD3Q8NCJ5 442 aa16.29■□□□□ 0.2
OPTN-210ENST00000482140 BCL7CQ8WUZ0 217 aaPredicted RBP16.29■□□□□ 0.2
OPTN-210ENST00000482140 SPIRE2Q8WWL2 714 aa16.29■□□□□ 0.2
OPTN-210ENST00000482140 FOXD4L4Q8WXT5 416 aaPredicted RBP16.29■□□□□ 0.2
OPTN-210ENST00000482140 LARP4BQ92615 738 aaKnown RBP16.29■□□□□ 0.2
OPTN-210ENST00000482140 ZBP1Q9H171 429 aa16.29■□□□□ 0.2
OPTN-210ENST00000482140 MIOSQ9NXC5 875 aa16.29■□□□□ 0.2
OPTN-210ENST00000482140 ODF2LQ9ULJ1 636 aa16.29■□□□□ 0.2
OPTN-210ENST00000482140 VCANP13611 3396 aa16.28■□□□□ 0.2
OPTN-210ENST00000482140 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.28■□□□□ 0.2
OPTN-210ENST00000482140 H0YCG3 227 aa16.28■□□□□ 0.2
OPTN-210ENST00000482140 RECQL4O94761 1208 aa16.28■□□□□ 0.2
OPTN-210ENST00000482140 FAM13AO94988 1023 aa16.28■□□□□ 0.2
OPTN-210ENST00000482140 IL9P15248 144 aa16.28■□□□□ 0.2
OPTN-210ENST00000482140 GIT2Q14161 759 aa16.28■□□□□ 0.2
OPTN-210ENST00000482140 SLC39A14Q15043 492 aa16.28■□□□□ 0.2
OPTN-210ENST00000482140 ZNF568Q3ZCX4 644 aa16.28■□□□□ 0.2
OPTN-210ENST00000482140 LLGL2Q6P1M3 1020 aa16.28■□□□□ 0.2
OPTN-210ENST00000482140 MRPL43Q8N983 215 aaKnown RBP16.28■□□□□ 0.2
OPTN-210ENST00000482140 KRI1Q8N9T8 703 aaKnown RBP16.28■□□□□ 0.2
OPTN-210ENST00000482140 EPSTI1Q96J88 318 aa16.28■□□□□ 0.2
OPTN-210ENST00000482140 CLIC6Q96NY7 704 aa16.28■□□□□ 0.2
OPTN-210ENST00000482140 ACO2Q99798 780 aaKnown RBP16.28■□□□□ 0.2
OPTN-210ENST00000482140 TCHPQ9BT92 498 aa16.28■□□□□ 0.2
OPTN-210ENST00000482140 COLEC11Q9BWP8 271 aa16.28■□□□□ 0.2
OPTN-210ENST00000482140 BLOC1S4Q9NUP1 217 aa16.28■□□□□ 0.2
OPTN-210ENST00000482140 BARX2Q9UMQ3 279 aaPredicted RBP16.28■□□□□ 0.2
OPTN-210ENST00000482140 TNFSF13BQ9Y275 285 aa16.28■□□□□ 0.2
OPTN-210ENST00000482140 GDAQ9Y2T3 454 aa16.28■□□□□ 0.2
OPTN-210ENST00000482140 TTC28Q96AY4 2481 aa16.28■□□□□ 0.2
OPTN-210ENST00000482140 XIRP2A4UGR9 3374 aa16.27■□□□□ 0.2
OPTN-210ENST00000482140 NCOR1O75376 2440 aa16.27■□□□□ 0.2
OPTN-210ENST00000482140 C2orf71A6NGG8 1288 aa16.27■□□□□ 0.2
OPTN-210ENST00000482140 TBCAO75347 108 aaKnown RBP16.27■□□□□ 0.2
OPTN-210ENST00000482140 GLP2RO95838 553 aa16.27■□□□□ 0.2
OPTN-210ENST00000482140 CTSAP10619 480 aa16.27■□□□□ 0.2
OPTN-210ENST00000482140 DSC1Q08554 894 aa16.27■□□□□ 0.2
OPTN-210ENST00000482140 SMAD4Q13485 552 aaKnown RBP16.27■□□□□ 0.2
OPTN-210ENST00000482140 ARSHQ5FYA8 562 aa16.27■□□□□ 0.2
OPTN-210ENST00000482140 RRAGBQ5VZM2 374 aa16.27■□□□□ 0.2
OPTN-210ENST00000482140 MYCT1Q8N699 235 aa16.27■□□□□ 0.2
OPTN-210ENST00000482140 AUTS2Q8WXX7 1259 aa16.27■□□□□ 0.2
OPTN-210ENST00000482140 REEP2Q9BRK0 252 aa16.27■□□□□ 0.2
OPTN-210ENST00000482140 NTPCRQ9BSD7 190 aaKnown RBP16.27■□□□□ 0.2
OPTN-210ENST00000482140 CCDC94Q9BW85 323 aaPredicted RBP16.27■□□□□ 0.2
OPTN-210ENST00000482140 TARS2Q9BW92 718 aaKnown RBP16.27■□□□□ 0.2
OPTN-210ENST00000482140 ZHX3Q9H4I2 956 aa16.27■□□□□ 0.2
OPTN-210ENST00000482140 STK17AQ9UEE5 414 aa16.27■□□□□ 0.2
OPTN-210ENST00000482140 TRIP11Q15643 1979 aa16.26■□□□□ 0.19
OPTN-210ENST00000482140 MBTPS2O43462 519 aa16.26■□□□□ 0.19
OPTN-210ENST00000482140 THP07101 528 aa16.26■□□□□ 0.19
OPTN-210ENST00000482140 ZSCAN22P10073 491 aaPredicted RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms