RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 DBF4BQ8NFT6 615 aa12.66□□□□□ -0.38
HPS4-212ENST00000481910 BADQ92934 168 aa12.66□□□□□ -0.38
HPS4-212ENST00000481910 TCHPQ9BT92 498 aa12.66□□□□□ -0.38
HPS4-212ENST00000481910 KCTD10Q9H3F6 313 aa12.66□□□□□ -0.38
HPS4-212ENST00000481910 KDM4CQ9H3R0 1056 aa12.66□□□□□ -0.38
HPS4-212ENST00000481910 ERVK-5Q9HDB9 667 aa12.66□□□□□ -0.38
HPS4-212ENST00000481910 ZMYND8Q9ULU4 1186 aaPredicted RBP12.66□□□□□ -0.38
HPS4-212ENST00000481910 A0A1B0GUA9 196 aa12.66□□□□□ -0.38
HPS4-212ENST00000481910 ANKRD63C9JTQ0 380 aa12.66□□□□□ -0.38
HPS4-212ENST00000481910 PDXKO00764 312 aa12.66□□□□□ -0.38
HPS4-212ENST00000481910 MATR3P43243 847 aaKnown RBP eCLIP12.66□□□□□ -0.38
HPS4-212ENST00000481910 PLEKHG4Q58EX7 1191 aa12.66□□□□□ -0.38
HPS4-212ENST00000481910 NOTUMQ6P988 496 aa12.66□□□□□ -0.38
HPS4-212ENST00000481910 HS2ST1Q7LGA3 356 aa12.66□□□□□ -0.38
HPS4-212ENST00000481910 TET1Q8NFU7 2136 aa12.66□□□□□ -0.38
HPS4-212ENST00000481910 NELFBQ8WX92 580 aa12.66□□□□□ -0.38
HPS4-212ENST00000481910 SEPT8Q92599 483 aa12.66□□□□□ -0.38
HPS4-212ENST00000481910 FUCA2Q9BTY2 467 aa12.66□□□□□ -0.38
HPS4-212ENST00000481910 SEMA6BQ9H3T3 888 aa12.66□□□□□ -0.38
HPS4-212ENST00000481910 CHST12Q9NRB3 414 aa12.66□□□□□ -0.38
HPS4-212ENST00000481910 ANKFY1Q9P2R3 1169 aa12.66□□□□□ -0.38
HPS4-212ENST00000481910 CTNND2Q9UQB3 1225 aa12.66□□□□□ -0.38
HPS4-212ENST00000481910 TNFSF13BQ9Y275 285 aa12.66□□□□□ -0.38
HPS4-212ENST00000481910 NR2E3Q9Y5X4 410 aa12.66□□□□□ -0.38
HPS4-212ENST00000481910 ZMYM2Q9UBW7 1377 aa12.65□□□□□ -0.38
HPS4-212ENST00000481910 TISP43B9A030 160 aa12.65□□□□□ -0.38
HPS4-212ENST00000481910 CLDN3O15551 220 aa12.65□□□□□ -0.38
HPS4-212ENST00000481910 TGFB1I1O43294 461 aa12.65□□□□□ -0.38
HPS4-212ENST00000481910 TOM1L1O75674 476 aa12.65□□□□□ -0.38
HPS4-212ENST00000481910 CAPN15O75808 1086 aa12.65□□□□□ -0.38
HPS4-212ENST00000481910 PIGRP01833 764 aa12.65□□□□□ -0.38
HPS4-212ENST00000481910 CXCL10P02778 98 aa12.65□□□□□ -0.38
HPS4-212ENST00000481910 PAK1Q13153 545 aa12.65□□□□□ -0.38
HPS4-212ENST00000481910 TWF2Q6IBS0 349 aaKnown RBP12.65□□□□□ -0.38
HPS4-212ENST00000481910 SLFN12LQ6IEE8 588 aa12.65□□□□□ -0.38
HPS4-212ENST00000481910 CENPPQ6IPU0 288 aa12.65□□□□□ -0.38
HPS4-212ENST00000481910 SLC39A4Q6P5W5 647 aa12.65□□□□□ -0.38
HPS4-212ENST00000481910 RPUSD2Q8IZ73 545 aaKnown RBP12.65□□□□□ -0.38
HPS4-212ENST00000481910 P2RX5Q93086 422 aa12.65□□□□□ -0.38
HPS4-212ENST00000481910 ZBTB45Q96K62 511 aaPredicted RBP12.65□□□□□ -0.38
HPS4-212ENST00000481910 ADPGKQ9BRR6 497 aa12.65□□□□□ -0.38
HPS4-212ENST00000481910 DNAJC25Q9H1X3 360 aa12.65□□□□□ -0.38
HPS4-212ENST00000481910 TYW1Q9NV66 732 aaKnown RBP12.65□□□□□ -0.38
HPS4-212ENST00000481910 TRIM49BA6NDI0 452 aa12.64□□□□□ -0.39
HPS4-212ENST00000481910 N4BP3O15049 544 aa12.64□□□□□ -0.39
HPS4-212ENST00000481910 CLIC2O15247 247 aa12.64□□□□□ -0.39
HPS4-212ENST00000481910 CALUO43852 315 aaPredicted RBP12.64□□□□□ -0.39
HPS4-212ENST00000481910 CCNE1P24864 410 aa12.64□□□□□ -0.39
HPS4-212ENST00000481910 PMS1P54277 932 aaKnown RBP12.64□□□□□ -0.39
HPS4-212ENST00000481910 STX17P56962 302 aa12.64□□□□□ -0.39
HPS4-212ENST00000481910 ANO6Q4KMQ2 910 aa12.64□□□□□ -0.39
HPS4-212ENST00000481910 TMCO4Q5TGY1 634 aa12.64□□□□□ -0.39
HPS4-212ENST00000481910 ANKRD40Q6AI12 368 aa12.64□□□□□ -0.39
HPS4-212ENST00000481910 ARMCX5Q6P1M9 558 aa12.64□□□□□ -0.39
HPS4-212ENST00000481910 SLC27A1Q6PCB7 646 aa12.64□□□□□ -0.39
HPS4-212ENST00000481910 C11orf57Q6ZUT1 292 aaPredicted RBP12.64□□□□□ -0.39
HPS4-212ENST00000481910 ZBTB33Q86T24 672 aa12.64□□□□□ -0.39
HPS4-212ENST00000481910 GOLGA5Q8TBA6 731 aa12.64□□□□□ -0.39
HPS4-212ENST00000481910 POMGNT1Q8WZA1 660 aa12.64□□□□□ -0.39
HPS4-212ENST00000481910 APBB2Q92870 758 aa12.64□□□□□ -0.39
HPS4-212ENST00000481910 TSG101Q99816 390 aa12.64□□□□□ -0.39
HPS4-212ENST00000481910 FTHL17Q9BXU8 183 aa12.64□□□□□ -0.39
HPS4-212ENST00000481910 NAT10Q9H0A0 1025 aaKnown RBP12.64□□□□□ -0.39
HPS4-212ENST00000481910 TMX1Q9H3N1 280 aa12.64□□□□□ -0.39
HPS4-212ENST00000481910 PDZD7Q9H5P4 517 aa12.64□□□□□ -0.39
HPS4-212ENST00000481910 PTPRHQ9HD43 1115 aa12.64□□□□□ -0.39
HPS4-212ENST00000481910 AGPAT3Q9NRZ7 376 aa12.64□□□□□ -0.39
HPS4-212ENST00000481910 DONSONQ9NYP3 566 aa12.64□□□□□ -0.39
HPS4-212ENST00000481910 TRAF3IP3Q9Y228 551 aa12.64□□□□□ -0.39
HPS4-212ENST00000481910 BICDL2A1A5D9 508 aa12.64□□□□□ -0.39
HPS4-212ENST00000481910 ERCC5P28715 1186 aaPredicted RBP12.64□□□□□ -0.39
HPS4-212ENST00000481910 ADSSP30520 456 aa12.64□□□□□ -0.39
HPS4-212ENST00000481910 SNRPFP62306 86 aaKnown RBP12.64□□□□□ -0.39
HPS4-212ENST00000481910 FPGSQ05932 587 aa12.64□□□□□ -0.39
HPS4-212ENST00000481910 ZNF568Q3ZCX4 644 aa12.64□□□□□ -0.39
HPS4-212ENST00000481910 CT47A1Q5JQC4 288 aaPredicted RBP12.64□□□□□ -0.39
HPS4-212ENST00000481910 EEF1DP3Q658K8 133 aa12.64□□□□□ -0.39
HPS4-212ENST00000481910 LRSAM1Q6UWE0 723 aa12.64□□□□□ -0.39
HPS4-212ENST00000481910 MPZL3Q6UWV2 235 aa12.64□□□□□ -0.39
HPS4-212ENST00000481910 ARMCX6Q7L4S7 300 aa12.64□□□□□ -0.39
HPS4-212ENST00000481910 ZNF513Q8N8E2 541 aaPredicted RBP12.64□□□□□ -0.39
HPS4-212ENST00000481910 ADAM2Q99965 735 aa12.64□□□□□ -0.39
HPS4-212ENST00000481910 LBHD1Q9BQE6 289 aaPredicted RBP12.64□□□□□ -0.39
HPS4-212ENST00000481910 RWDD2AQ9UIY3 292 aa12.64□□□□□ -0.39
HPS4-212ENST00000481910 STYXL1Q9Y6J8 313 aa12.64□□□□□ -0.39
HPS4-212ENST00000481910 MGEA5O60502 916 aa12.63□□□□□ -0.39
HPS4-212ENST00000481910 PFKMP08237 780 aa12.63□□□□□ -0.39
HPS4-212ENST00000481910 ACRP10323 421 aa12.63□□□□□ -0.39
HPS4-212ENST00000481910 NEFHP12036 1026 aa12.63□□□□□ -0.39
HPS4-212ENST00000481910 HARSP12081 509 aaKnown RBP12.63□□□□□ -0.39
HPS4-212ENST00000481910 PROZP22891 400 aa12.63□□□□□ -0.39
HPS4-212ENST00000481910 LRRC63Q05C16 580 aa12.63□□□□□ -0.39
HPS4-212ENST00000481910 PPIGQ13427 754 aaKnown RBP eCLIP12.63□□□□□ -0.39
HPS4-212ENST00000481910 CNKSR3Q6P9H4 555 aa12.63□□□□□ -0.39
HPS4-212ENST00000481910 APBB1IPQ7Z5R6 666 aaPredicted RBP12.63□□□□□ -0.39
HPS4-212ENST00000481910 VWCEQ96DN2 955 aa12.63□□□□□ -0.39
HPS4-212ENST00000481910 CBWD1Q9BRT8 395 aa12.63□□□□□ -0.39
HPS4-212ENST00000481910 MSTO1Q9BUK6 570 aa12.63□□□□□ -0.39
HPS4-212ENST00000481910 EIF2AQ9BY44 585 aaKnown RBP12.63□□□□□ -0.39
HPS4-212ENST00000481910 TRIM6Q9C030 488 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 1082.3 ms