RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 THBS1P07996 1170 aa9□□□□□ -0.97
LSM5-210ENST00000480956 ATP5F1P24539 256 aaPredicted RBP9□□□□□ -0.97
LSM5-210ENST00000480956 MAP3K12Q12852 859 aa9□□□□□ -0.97
LSM5-210ENST00000480956 IFI16Q16666 785 aaKnown RBP9□□□□□ -0.97
LSM5-210ENST00000480956 THEMIS2Q5TEJ8 643 aa9□□□□□ -0.97
LSM5-210ENST00000480956 ANGEL2Q5VTE6 544 aaKnown RBP9□□□□□ -0.97
LSM5-210ENST00000480956 GALNT17Q6IS24 598 aa9□□□□□ -0.97
LSM5-210ENST00000480956 CDC37L1Q7L3B6 337 aa9□□□□□ -0.97
LSM5-210ENST00000480956 NLRP14Q86W24 1093 aa9□□□□□ -0.97
LSM5-210ENST00000480956 OSTM1Q86WC4 334 aa9□□□□□ -0.97
LSM5-210ENST00000480956 OR8H3Q8N146 312 aa9□□□□□ -0.97
LSM5-210ENST00000480956 TRIML1Q8N9V2 468 aa9□□□□□ -0.97
LSM5-210ENST00000480956 CREB3L4Q8TEY5 395 aa9□□□□□ -0.97
LSM5-210ENST00000480956 EDEM3Q9BZQ6 932 aa9□□□□□ -0.97
LSM5-210ENST00000480956 SMG9Q9H0W8 520 aaKnown RBP9□□□□□ -0.97
LSM5-210ENST00000480956 C2orf40Q9H1Z8 148 aa9□□□□□ -0.97
LSM5-210ENST00000480956 OR10A4Q9H209 315 aa9□□□□□ -0.97
LSM5-210ENST00000480956 KCTD10Q9H3F6 313 aa9□□□□□ -0.97
LSM5-210ENST00000480956 TM7SF3Q9NS93 570 aa9□□□□□ -0.97
LSM5-210ENST00000480956 GFOD1Q9NXC2 390 aa9□□□□□ -0.97
LSM5-210ENST00000480956 C2orf71A6NGG8 1288 aa8.99□□□□□ -0.97
LSM5-210ENST00000480956 PI4K2BG5E9Z4 385 aa8.99□□□□□ -0.97
LSM5-210ENST00000480956 H0Y626 953 aa8.99□□□□□ -0.97
LSM5-210ENST00000480956 GOLGA6L22H0YM25 854 aa8.99□□□□□ -0.97
LSM5-210ENST00000480956 MYO1FO00160 1098 aa8.99□□□□□ -0.97
LSM5-210ENST00000480956 COBLO75128 1261 aa8.99□□□□□ -0.97
LSM5-210ENST00000480956 CST3P01034 146 aaPredicted RBP8.99□□□□□ -0.97
LSM5-210ENST00000480956 KITP10721 976 aa8.99□□□□□ -0.97
LSM5-210ENST00000480956 SCG2P13521 617 aa8.99□□□□□ -0.97
LSM5-210ENST00000480956 KRT10P13645 584 aa8.99□□□□□ -0.97
LSM5-210ENST00000480956 MSH2P43246 934 aa8.99□□□□□ -0.97
LSM5-210ENST00000480956 TNNT2P45379 298 aaPredicted RBP8.99□□□□□ -0.97
LSM5-210ENST00000480956 CCR5P51681 352 aa8.99□□□□□ -0.97
LSM5-210ENST00000480956 AFF3P51826 1226 aaKnown RBP8.99□□□□□ -0.97
LSM5-210ENST00000480956 JAM2P57087 298 aa8.99□□□□□ -0.97
LSM5-210ENST00000480956 PPARDQ03181 441 aa8.99□□□□□ -0.97
LSM5-210ENST00000480956 AP1B1Q10567 949 aa8.99□□□□□ -0.97
LSM5-210ENST00000480956 PPP2R5BQ15173 497 aa8.99□□□□□ -0.97
LSM5-210ENST00000480956 UBE3CQ15386 1083 aa8.99□□□□□ -0.97
LSM5-210ENST00000480956 ZNF362Q5T0B9 420 aaPredicted RBP8.99□□□□□ -0.97
LSM5-210ENST00000480956 GPR139Q6DWJ6 353 aa8.99□□□□□ -0.97
LSM5-210ENST00000480956 FBXO38Q6PIJ6 1188 aa8.99□□□□□ -0.97
LSM5-210ENST00000480956 KIAA1211Q6ZU35 1233 aa8.99□□□□□ -0.97
LSM5-210ENST00000480956 BEND5Q7L4P6 421 aa8.99□□□□□ -0.97
LSM5-210ENST00000480956 NUP93Q8N1F7 819 aa8.99□□□□□ -0.97
LSM5-210ENST00000480956 CCDC155Q8N6L0 562 aa8.99□□□□□ -0.97
LSM5-210ENST00000480956 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.99□□□□□ -0.97
LSM5-210ENST00000480956 XAGE3Q8WTP9 111 aa8.99□□□□□ -0.97
LSM5-210ENST00000480956 PPP1R13LQ8WUF5 828 aa8.99□□□□□ -0.97
LSM5-210ENST00000480956 STYXQ8WUJ0 223 aa8.99□□□□□ -0.97
LSM5-210ENST00000480956 TTC9Q92623 222 aa8.99□□□□□ -0.97
LSM5-210ENST00000480956 MCMBPQ9BTE3 642 aa8.99□□□□□ -0.97
LSM5-210ENST00000480956 PRDM14Q9GZV8 571 aa8.99□□□□□ -0.97
LSM5-210ENST00000480956 NXF1Q9UBU9 619 aaKnown RBP8.99□□□□□ -0.97
LSM5-210ENST00000480956 PCDHGB4Q9UN71 923 aa8.99□□□□□ -0.97
LSM5-210ENST00000480956 H0Y8X5 98 aa8.98□□□□□ -0.97
LSM5-210ENST00000480956 FSCN2O14926 492 aa8.98□□□□□ -0.97
LSM5-210ENST00000480956 TNFRSF6BO95407 300 aa8.98□□□□□ -0.97
LSM5-210ENST00000480956 LPLP06858 475 aa8.98□□□□□ -0.97
LSM5-210ENST00000480956 CD33P20138 364 aa8.98□□□□□ -0.97
LSM5-210ENST00000480956 NTF4P34130 210 aa8.98□□□□□ -0.97
LSM5-210ENST00000480956 CD86P42081 329 aa8.98□□□□□ -0.97
LSM5-210ENST00000480956 CCR9P51686 369 aa8.98□□□□□ -0.97
LSM5-210ENST00000480956 CLCN2P51788 898 aa8.98□□□□□ -0.97
LSM5-210ENST00000480956 UBXN2AP68543 259 aa8.98□□□□□ -0.97
LSM5-210ENST00000480956 SLC12A1Q13621 1099 aa8.98□□□□□ -0.97
LSM5-210ENST00000480956 EIF4A2Q14240 407 aaKnown RBP8.98□□□□□ -0.97
LSM5-210ENST00000480956 SLBPQ14493 270 aaKnown RBP eCLIP8.98□□□□□ -0.97
LSM5-210ENST00000480956 MMEL1Q495T6 779 aa8.98□□□□□ -0.97
LSM5-210ENST00000480956 CYP4F22Q6NT55 531 aa8.98□□□□□ -0.97
LSM5-210ENST00000480956 HHIPL2Q6UWX4 724 aa8.98□□□□□ -0.97
LSM5-210ENST00000480956 CCAR2Q8N163 923 aaKnown RBP8.98□□□□□ -0.97
LSM5-210ENST00000480956 RCBTB1Q8NDN9 531 aa8.98□□□□□ -0.97
LSM5-210ENST00000480956 PPP1R9BQ96SB3 815 aa8.98□□□□□ -0.97
LSM5-210ENST00000480956 WDR18Q9BV38 432 aa8.98□□□□□ -0.97
LSM5-210ENST00000480956 MXD3Q9BW11 206 aa8.98□□□□□ -0.97
LSM5-210ENST00000480956 EIF2B4Q9UI10 523 aaKnown RBP8.98□□□□□ -0.97
LSM5-210ENST00000480956 HCN2Q9UL51 889 aa8.98□□□□□ -0.97
LSM5-210ENST00000480956 MAN2B2Q9Y2E5 1009 aa8.98□□□□□ -0.97
LSM5-210ENST00000480956 MTF2Q9Y483 593 aaPredicted RBP8.98□□□□□ -0.97
LSM5-210ENST00000480956 RNF225M0QZC1 329 aaPredicted RBP8.97□□□□□ -0.97
LSM5-210ENST00000480956 PODXLO00592 558 aa8.97□□□□□ -0.97
LSM5-210ENST00000480956 KCNK3O14649 394 aa8.97□□□□□ -0.97
LSM5-210ENST00000480956 TERTO14746 1132 aaKnown RBP8.97□□□□□ -0.97
LSM5-210ENST00000480956 FYB1O15117 783 aa8.97□□□□□ -0.97
LSM5-210ENST00000480956 SLC7A4O43246 635 aa8.97□□□□□ -0.97
LSM5-210ENST00000480956 FAM155BO75949 473 aa8.97□□□□□ -0.97
LSM5-210ENST00000480956 P4HA1P13674 534 aa8.97□□□□□ -0.97
LSM5-210ENST00000480956 PLS3P13797 630 aa8.97□□□□□ -0.97
LSM5-210ENST00000480956 SEPHS1P49903 392 aa8.97□□□□□ -0.97
LSM5-210ENST00000480956 EVCP57679 992 aa8.97□□□□□ -0.97
LSM5-210ENST00000480956 PIP4K2BP78356 416 aa8.97□□□□□ -0.97
LSM5-210ENST00000480956 CHRNDQ07001 517 aa8.97□□□□□ -0.97
LSM5-210ENST00000480956 PITRM1Q5JRX3 1037 aa8.97□□□□□ -0.97
LSM5-210ENST00000480956 SLC9C2Q5TAH2 1124 aa8.97□□□□□ -0.97
LSM5-210ENST00000480956 ELMSAN1Q6PJG2 1045 aa8.97□□□□□ -0.97
LSM5-210ENST00000480956 ZNF783Q6ZMS7 281 aa8.97□□□□□ -0.97
LSM5-210ENST00000480956 OTUD7AQ8TE49 926 aaPredicted RBP8.97□□□□□ -0.97
LSM5-210ENST00000480956 AFG1LQ8WV93 481 aa8.97□□□□□ -0.97
LSM5-210ENST00000480956 IQCDQ96DY2 449 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms