RNA–Protein interactions for RNA: ENST00000480923.5

VPS36-204, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-204ENST00000480923 KCNG1Q9UIX4 513 aa22.17■■□□□ 1.14
VPS36-204ENST00000480923 FAN1Q9Y2M0 1017 aa22.17■■□□□ 1.14
VPS36-204ENST00000480923 LINC01565O15544 149 aa22.16■■□□□ 1.14
VPS36-204ENST00000480923 ALDH2P05091 517 aa22.16■■□□□ 1.14
VPS36-204ENST00000480923 KRT18P05783 430 aaKnown RBP22.16■■□□□ 1.14
VPS36-204ENST00000480923 ZSCAN22P10073 491 aaPredicted RBP22.16■■□□□ 1.14
VPS36-204ENST00000480923 NASPP49321 788 aaPredicted RBP22.16■■□□□ 1.14
VPS36-204ENST00000480923 NDUFV1P49821 464 aa22.16■■□□□ 1.14
VPS36-204ENST00000480923 SMTNP53814 917 aa22.16■■□□□ 1.14
VPS36-204ENST00000480923 ADAM15Q13444 863 aa22.16■■□□□ 1.14
VPS36-204ENST00000480923 BMS1Q14692 1282 aaKnown RBP22.16■■□□□ 1.14
VPS36-204ENST00000480923 DCAF4L1Q3SXM0 396 aa22.16■■□□□ 1.14
VPS36-204ENST00000480923 ARSHQ5FYA8 562 aa22.16■■□□□ 1.14
VPS36-204ENST00000480923 APBB1IPQ7Z5R6 666 aaPredicted RBP22.16■■□□□ 1.14
VPS36-204ENST00000480923 VPS52Q8N1B4 723 aa22.16■■□□□ 1.14
VPS36-204ENST00000480923 EFHBQ8N7U6 833 aa22.16■■□□□ 1.14
VPS36-204ENST00000480923 KRI1Q8N9T8 703 aaKnown RBP22.16■■□□□ 1.14
VPS36-204ENST00000480923 BCL7CQ8WUZ0 217 aaPredicted RBP22.16■■□□□ 1.14
VPS36-204ENST00000480923 SPIRE2Q8WWL2 714 aa22.16■■□□□ 1.14
VPS36-204ENST00000480923 LARP4BQ92615 738 aaKnown RBP22.16■■□□□ 1.14
VPS36-204ENST00000480923 UHRF1Q96T88 793 aaPredicted RBP22.16■■□□□ 1.14
VPS36-204ENST00000480923 MRPL4Q9BYD3 311 aaKnown RBP22.16■■□□□ 1.14
VPS36-204ENST00000480923 MIOSQ9NXC5 875 aa22.16■■□□□ 1.14
VPS36-204ENST00000480923 SNTG2Q9NY99 539 aa22.16■■□□□ 1.14
VPS36-204ENST00000480923 NRP1O14786 923 aa22.15■■□□□ 1.14
VPS36-204ENST00000480923 LTBRP36941 435 aa22.15■■□□□ 1.14
VPS36-204ENST00000480923 ANP32AP39687 249 aaKnown RBP22.15■■□□□ 1.14
VPS36-204ENST00000480923 OR1G1P47890 313 aa22.15■■□□□ 1.14
VPS36-204ENST00000480923 SMC1AQ14683 1233 aaKnown RBP22.15■■□□□ 1.14
VPS36-204ENST00000480923 PTCRAQ6ISU1 281 aaPredicted RBP22.15■■□□□ 1.14
VPS36-204ENST00000480923 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.15■■□□□ 1.14
VPS36-204ENST00000480923 REEP2Q9BRK0 252 aa22.15■■□□□ 1.14
VPS36-204ENST00000480923 NTPCRQ9BSD7 190 aaKnown RBP22.15■■□□□ 1.14
VPS36-204ENST00000480923 LARSQ9P2J5 1176 aaKnown RBP22.15■■□□□ 1.14
VPS36-204ENST00000480923 TFIP11Q9UBB9 837 aaKnown RBP22.15■■□□□ 1.14
VPS36-204ENST00000480923 ODF2LQ9ULJ1 636 aa22.15■■□□□ 1.14
VPS36-204ENST00000480923 TNFSF13BQ9Y275 285 aa22.15■■□□□ 1.14
VPS36-204ENST00000480923 PRG3Q9Y2Y8 225 aaPredicted RBP22.15■■□□□ 1.14
VPS36-204ENST00000480923 MORC2Q9Y6X9 1032 aaPredicted RBP22.15■■□□□ 1.14
VPS36-204ENST00000480923 XIRP2A4UGR9 3374 aa22.15■■□□□ 1.14
VPS36-204ENST00000480923 ZMYM2Q9UBW7 1377 aa22.14■■□□□ 1.14
VPS36-204ENST00000480923 ATG2AQ2TAZ0 1938 aa22.14■■□□□ 1.14
VPS36-204ENST00000480923 HIDE1A8MVS5 230 aa22.14■■□□□ 1.13
VPS36-204ENST00000480923 FAM13AO94988 1023 aa22.14■■□□□ 1.13
VPS36-204ENST00000480923 F13A1P00488 732 aa22.14■■□□□ 1.13
VPS36-204ENST00000480923 DLX2Q07687 328 aaPredicted RBP22.14■■□□□ 1.13
VPS36-204ENST00000480923 STRN3Q13033 797 aa22.14■■□□□ 1.13
VPS36-204ENST00000480923 CLUL1Q15846 466 aa22.14■■□□□ 1.13
VPS36-204ENST00000480923 DUSP6Q16828 381 aa22.14■■□□□ 1.13
VPS36-204ENST00000480923 FOXD4L6Q3SYB3 417 aaPredicted RBP22.14■■□□□ 1.13
VPS36-204ENST00000480923 FOXD4L3Q6VB84 417 aaPredicted RBP22.14■■□□□ 1.13
VPS36-204ENST00000480923 TAS1R3Q7RTX0 852 aa22.14■■□□□ 1.13
VPS36-204ENST00000480923 DDX53Q86TM3 631 aaKnown RBP22.14■■□□□ 1.13
VPS36-204ENST00000480923 COLGALT2Q8IYK4 626 aa22.14■■□□□ 1.13
VPS36-204ENST00000480923 LINC00301Q8NCQ3 95 aa22.14■■□□□ 1.13
VPS36-204ENST00000480923 NECAB3Q96P71 396 aaPredicted RBP22.14■■□□□ 1.13
VPS36-204ENST00000480923 CDCA3Q99618 268 aaPredicted RBP22.14■■□□□ 1.13
VPS36-204ENST00000480923 TARS2Q9BW92 718 aaKnown RBP22.14■■□□□ 1.13
VPS36-204ENST00000480923 GDAQ9Y2T3 454 aa22.14■■□□□ 1.13
VPS36-204ENST00000480923 SPTLC2O15270 562 aa22.13■■□□□ 1.13
VPS36-204ENST00000480923 TBX10O75333 385 aa22.13■■□□□ 1.13
VPS36-204ENST00000480923 NR1I2O75469 434 aa22.13■■□□□ 1.13
VPS36-204ENST00000480923 RECQL4O94761 1208 aa22.13■■□□□ 1.13
VPS36-204ENST00000480923 DDIT3P35638 169 aa22.13■■□□□ 1.13
VPS36-204ENST00000480923 DSC1Q08554 894 aa22.13■■□□□ 1.13
VPS36-204ENST00000480923 GRIK3Q13003 919 aa22.13■■□□□ 1.13
VPS36-204ENST00000480923 PUS10Q3MIT2 529 aaKnown RBP22.13■■□□□ 1.13
VPS36-204ENST00000480923 ZNF568Q3ZCX4 644 aa22.13■■□□□ 1.13
VPS36-204ENST00000480923 RRAGBQ5VZM2 374 aa22.13■■□□□ 1.13
VPS36-204ENST00000480923 TMEM161BQ8NDZ6 487 aa22.13■■□□□ 1.13
VPS36-204ENST00000480923 GSTCDQ8NEC7 633 aa22.13■■□□□ 1.13
VPS36-204ENST00000480923 ACO2Q99798 780 aaKnown RBP22.13■■□□□ 1.13
VPS36-204ENST00000480923 ZBP1Q9H171 429 aa22.13■■□□□ 1.13
VPS36-204ENST00000480923 ZHX3Q9H4I2 956 aa22.13■■□□□ 1.13
VPS36-204ENST00000480923 STK17AQ9UEE5 414 aa22.13■■□□□ 1.13
VPS36-204ENST00000480923 DAXXQ9UER7 740 aaPredicted RBP22.13■■□□□ 1.13
VPS36-204ENST00000480923 MYO7AQ13402 2215 aa22.12■■□□□ 1.13
VPS36-204ENST00000480923 FSD2A1L4K1 749 aa22.12■■□□□ 1.13
VPS36-204ENST00000480923 H0YCG3 227 aa22.12■■□□□ 1.13
VPS36-204ENST00000480923 TBCAO75347 108 aaKnown RBP22.12■■□□□ 1.13
VPS36-204ENST00000480923 CXCL14O95715 111 aa22.12■■□□□ 1.13
VPS36-204ENST00000480923 GIT2Q14161 759 aa22.12■■□□□ 1.13
VPS36-204ENST00000480923 ZBTB33Q86T24 672 aa22.12■■□□□ 1.13
VPS36-204ENST00000480923 MYCT1Q8N699 235 aa22.12■■□□□ 1.13
VPS36-204ENST00000480923 MRPL43Q8N983 215 aaKnown RBP22.12■■□□□ 1.13
VPS36-204ENST00000480923 TMEM87AQ8NBN3 555 aa22.12■■□□□ 1.13
VPS36-204ENST00000480923 TCHPQ9BT92 498 aa22.12■■□□□ 1.13
VPS36-204ENST00000480923 CDT1Q9H211 546 aa22.12■■□□□ 1.13
VPS36-204ENST00000480923 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.11■■□□□ 1.13
VPS36-204ENST00000480923 YEATS4O95619 227 aa22.11■■□□□ 1.13
VPS36-204ENST00000480923 MAPTP10636 758 aaKnown RBP22.11■■□□□ 1.13
VPS36-204ENST00000480923 IL9P15248 144 aa22.11■■□□□ 1.13
VPS36-204ENST00000480923 PKP1Q13835 747 aa22.11■■□□□ 1.13
VPS36-204ENST00000480923 AUTS2Q8WXX7 1259 aa22.11■■□□□ 1.13
VPS36-204ENST00000480923 PANK2Q9BZ23 570 aa22.11■■□□□ 1.13
VPS36-204ENST00000480923 PARVGQ9HBI0 331 aa22.11■■□□□ 1.13
VPS36-204ENST00000480923 MARCH5Q9NX47 278 aa22.11■■□□□ 1.13
VPS36-204ENST00000480923 STK39Q9UEW8 545 aa22.11■■□□□ 1.13
VPS36-204ENST00000480923 CD207Q9UJ71 328 aa22.11■■□□□ 1.13
VPS36-204ENST00000480923 BARX2Q9UMQ3 279 aaPredicted RBP22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 197.4 ms