RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 SMRP1Q8NCR6 262 aa18.74■□□□□ 0.59
HSPG2-209ENST00000480900 VN1R2Q8NFZ6 395 aa18.74■□□□□ 0.59
HSPG2-209ENST00000480900 CALML4Q96GE6 196 aa18.74■□□□□ 0.59
HSPG2-209ENST00000480900 PLIN2Q99541 437 aa18.74■□□□□ 0.59
HSPG2-209ENST00000480900 ARHGAP28Q9P2N2 729 aa18.74■□□□□ 0.59
HSPG2-209ENST00000480900 PRKAG3Q9UGI9 489 aa18.74■□□□□ 0.59
HSPG2-209ENST00000480900 BARX2Q9UMQ3 279 aaPredicted RBP18.74■□□□□ 0.59
HSPG2-209ENST00000480900 MTMR6Q9Y217 621 aa18.74■□□□□ 0.59
HSPG2-209ENST00000480900 FAN1Q9Y2M0 1017 aa18.74■□□□□ 0.59
HSPG2-209ENST00000480900 IRAK3Q9Y616 596 aa18.74■□□□□ 0.59
HSPG2-209ENST00000480900 K7ERI5 159 aa18.73■□□□□ 0.59
HSPG2-209ENST00000480900 SSBP05455 408 aaKnown RBP eCLIP18.73■□□□□ 0.59
HSPG2-209ENST00000480900 PLA2G4BP0C869 781 aa18.73■□□□□ 0.59
HSPG2-209ENST00000480900 CTSAP10619 480 aa18.73■□□□□ 0.59
HSPG2-209ENST00000480900 AKAP5P24588 427 aa18.73■□□□□ 0.59
HSPG2-209ENST00000480900 KCNC3Q14003 757 aa18.73■□□□□ 0.59
HSPG2-209ENST00000480900 GIT2Q14161 759 aa18.73■□□□□ 0.59
HSPG2-209ENST00000480900 PTPAQ15257 358 aa18.73■□□□□ 0.59
HSPG2-209ENST00000480900 DCAF4L1Q3SXM0 396 aa18.73■□□□□ 0.59
HSPG2-209ENST00000480900 TMEM184AQ6ZMB5 413 aa18.73■□□□□ 0.59
HSPG2-209ENST00000480900 GSTCDQ8NEC7 633 aa18.73■□□□□ 0.59
HSPG2-209ENST00000480900 VN1R3Q9BXE9 311 aa18.73■□□□□ 0.59
HSPG2-209ENST00000480900 TMEM134Q9H6X4 195 aa18.73■□□□□ 0.59
HSPG2-209ENST00000480900 MIOSQ9NXC5 875 aa18.73■□□□□ 0.59
HSPG2-209ENST00000480900 PARP2Q9UGN5 583 aa18.73■□□□□ 0.59
HSPG2-209ENST00000480900 KCNG1Q9UIX4 513 aa18.73■□□□□ 0.59
HSPG2-209ENST00000480900 RBM19Q9Y4C8 960 aaKnown RBP18.73■□□□□ 0.59
HSPG2-209ENST00000480900 NRP1O14786 923 aa18.72■□□□□ 0.59
HSPG2-209ENST00000480900 STX6O43752 255 aa18.72■□□□□ 0.59
HSPG2-209ENST00000480900 GRIN1Q05586 938 aa18.72■□□□□ 0.59
HSPG2-209ENST00000480900 GRIK3Q13003 919 aa18.72■□□□□ 0.59
HSPG2-209ENST00000480900 NT5DC1Q5TFE4 455 aa18.72■□□□□ 0.59
HSPG2-209ENST00000480900 ATF7IP2Q5U623 682 aa18.72■□□□□ 0.59
HSPG2-209ENST00000480900 EEF1DP3Q658K8 133 aa18.72■□□□□ 0.59
HSPG2-209ENST00000480900 APBB1IPQ7Z5R6 666 aaPredicted RBP18.72■□□□□ 0.59
HSPG2-209ENST00000480900 RPS6KC1Q96S38 1066 aa18.72■□□□□ 0.59
HSPG2-209ENST00000480900 KMT5AQ9NQR1 393 aa18.72■□□□□ 0.59
HSPG2-209ENST00000480900 FOXD4L1Q9NU39 408 aa18.72■□□□□ 0.59
HSPG2-209ENST00000480900 CLIC4Q9Y696 253 aa18.72■□□□□ 0.59
HSPG2-209ENST00000480900 PDCD11Q14690 1871 aaKnown RBP18.71■□□□□ 0.59
HSPG2-209ENST00000480900 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.71■□□□□ 0.59
HSPG2-209ENST00000480900 CXCL14O95715 111 aa18.71■□□□□ 0.59
HSPG2-209ENST00000480900 PLS3P13797 630 aa18.71■□□□□ 0.59
HSPG2-209ENST00000480900 RBM10P98175 930 aaKnown RBP18.71■□□□□ 0.59
HSPG2-209ENST00000480900 ZP2Q05996 745 aa18.71■□□□□ 0.59
HSPG2-209ENST00000480900 RAD51AP2Q09MP3 1159 aa18.71■□□□□ 0.59
HSPG2-209ENST00000480900 HSCBQ8IWL3 235 aa18.71■□□□□ 0.59
HSPG2-209ENST00000480900 ADHFE1Q8IWW8 467 aa18.71■□□□□ 0.59
HSPG2-209ENST00000480900 SPIRE2Q8WWL2 714 aa18.71■□□□□ 0.59
HSPG2-209ENST00000480900 NTPCRQ9BSD7 190 aaKnown RBP18.71■□□□□ 0.59
HSPG2-209ENST00000480900 MRPL4Q9BYD3 311 aaKnown RBP18.71■□□□□ 0.59
HSPG2-209ENST00000480900 CCSER1Q9C0I3 900 aa18.71■□□□□ 0.59
HSPG2-209ENST00000480900 ZSCAN16Q9H4T2 348 aaPredicted RBP18.71■□□□□ 0.59
HSPG2-209ENST00000480900 MARCH5Q9NX47 278 aa18.71■□□□□ 0.59
HSPG2-209ENST00000480900 KLK14Q9P0G3 267 aa18.71■□□□□ 0.59
HSPG2-209ENST00000480900 TNFSF13BQ9Y275 285 aa18.71■□□□□ 0.59
HSPG2-209ENST00000480900 USP20Q9Y2K6 914 aa18.71■□□□□ 0.59
HSPG2-209ENST00000480900 PRG3Q9Y2Y8 225 aaPredicted RBP18.71■□□□□ 0.59
HSPG2-209ENST00000480900 MORC2Q9Y6X9 1032 aaPredicted RBP18.71■□□□□ 0.59
HSPG2-209ENST00000480900 MTCL1Q9Y4B5 1905 aaKnown RBP18.7■□□□□ 0.58
HSPG2-209ENST00000480900 NR1I2O75469 434 aa18.7■□□□□ 0.58
HSPG2-209ENST00000480900 RECQL4O94761 1208 aa18.7■□□□□ 0.58
HSPG2-209ENST00000480900 PLCG1P19174 1290 aa18.7■□□□□ 0.58
HSPG2-209ENST00000480900 OR1G1P47890 313 aa18.7■□□□□ 0.58
HSPG2-209ENST00000480900 FAM173BQ6P4H8 233 aa18.7■□□□□ 0.58
HSPG2-209ENST00000480900 TAS1R3Q7RTX0 852 aa18.7■□□□□ 0.58
HSPG2-209ENST00000480900 GJD3Q8N144 294 aa18.7■□□□□ 0.58
HSPG2-209ENST00000480900 RASSF8Q8NHQ8 419 aa18.7■□□□□ 0.58
HSPG2-209ENST00000480900 CASP10Q92851 521 aa18.7■□□□□ 0.58
HSPG2-209ENST00000480900 CD320Q9NPF0 282 aa18.7■□□□□ 0.58
HSPG2-209ENST00000480900 SNTG2Q9NY99 539 aa18.7■□□□□ 0.58
HSPG2-209ENST00000480900 ODF2LQ9ULJ1 636 aa18.7■□□□□ 0.58
HSPG2-209ENST00000480900 SFI1A8K8P3 1242 aa18.69■□□□□ 0.58
HSPG2-209ENST00000480900 SLC16A4O15374 487 aa18.69■□□□□ 0.58
HSPG2-209ENST00000480900 CLASP2O75122 1294 aaKnown RBP18.69■□□□□ 0.58
HSPG2-209ENST00000480900 MARCKSP29966 332 aaPredicted RBP18.69■□□□□ 0.58
HSPG2-209ENST00000480900 CA8P35219 290 aa18.69■□□□□ 0.58
HSPG2-209ENST00000480900 SMTNP53814 917 aa18.69■□□□□ 0.58
HSPG2-209ENST00000480900 TUSC3Q13454 348 aa18.69■□□□□ 0.58
HSPG2-209ENST00000480900 KARSQ15046 597 aaKnown RBP18.69■□□□□ 0.58
HSPG2-209ENST00000480900 PTPN14Q15678 1187 aa18.69■□□□□ 0.58
HSPG2-209ENST00000480900 ARSHQ5FYA8 562 aa18.69■□□□□ 0.58
HSPG2-209ENST00000480900 ANKRD54Q6NXT1 300 aa18.69■□□□□ 0.58
HSPG2-209ENST00000480900 GPBP1Q86WP2 473 aa18.69■□□□□ 0.58
HSPG2-209ENST00000480900 TMEM87AQ8NBN3 555 aa18.69■□□□□ 0.58
HSPG2-209ENST00000480900 TMEM161BQ8NDZ6 487 aa18.69■□□□□ 0.58
HSPG2-209ENST00000480900 LRRC15Q8TF66 581 aa18.69■□□□□ 0.58
HSPG2-209ENST00000480900 AUTS2Q8WXX7 1259 aa18.69■□□□□ 0.58
HSPG2-209ENST00000480900 ACO2Q99798 780 aaKnown RBP18.69■□□□□ 0.58
HSPG2-209ENST00000480900 HERC2P3Q9BVR0 1158 aa18.69■□□□□ 0.58
HSPG2-209ENST00000480900 COLEC11Q9BWP8 271 aa18.69■□□□□ 0.58
HSPG2-209ENST00000480900 BLOC1S4Q9NUP1 217 aa18.69■□□□□ 0.58
HSPG2-209ENST00000480900 LARSQ9P2J5 1176 aaKnown RBP18.69■□□□□ 0.58
HSPG2-209ENST00000480900 FBXO2Q9UK22 296 aaPredicted RBP18.69■□□□□ 0.58
HSPG2-209ENST00000480900 USP15Q9Y4E8 981 aaPredicted RBP18.69■□□□□ 0.58
HSPG2-209ENST00000480900 SRPRBQ9Y5M8 271 aaKnown RBP18.69■□□□□ 0.58
HSPG2-209ENST00000480900 HCFC2Q9Y5Z7 792 aa18.69■□□□□ 0.58
HSPG2-209ENST00000480900 C19orf67A6NJJ6 358 aa18.68■□□□□ 0.58
HSPG2-209ENST00000480900 EFEMP2O95967 443 aa18.68■□□□□ 0.58
HSPG2-209ENST00000480900 SOD2P04179 222 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms