RNA–Protein interactions for RNA: ENST00000480539.1

ABCF3-213, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-213ENST00000480539 ZBTB45Q96K62 511 aaPredicted RBP16.6■□□□□ 0.25
ABCF3-213ENST00000480539 C17orf80Q9BSJ5 609 aa16.6■□□□□ 0.25
ABCF3-213ENST00000480539 ST6GALNAC4Q9H4F1 302 aa16.6■□□□□ 0.25
ABCF3-213ENST00000480539 EXOC1Q9NV70 894 aa16.6■□□□□ 0.25
ABCF3-213ENST00000480539 SZT2Q5T011 3432 aa16.6■□□□□ 0.25
ABCF3-213ENST00000480539 EPOPA6NHQ4 379 aa16.59■□□□□ 0.25
ABCF3-213ENST00000480539 TISP43B9A030 160 aa16.59■□□□□ 0.25
ABCF3-213ENST00000480539 TOM1L1O75674 476 aa16.59■□□□□ 0.25
ABCF3-213ENST00000480539 SCP2P22307 547 aa16.59■□□□□ 0.25
ABCF3-213ENST00000480539 PROZP22891 400 aa16.59■□□□□ 0.25
ABCF3-213ENST00000480539 CTNNB1P35222 781 aa16.59■□□□□ 0.25
ABCF3-213ENST00000480539 MATR3P43243 847 aaKnown RBP eCLIP16.59■□□□□ 0.25
ABCF3-213ENST00000480539 UBE2HP62256 183 aa16.59■□□□□ 0.25
ABCF3-213ENST00000480539 EHHADHQ08426 723 aa16.59■□□□□ 0.25
ABCF3-213ENST00000480539 KCNA1Q09470 495 aa16.59■□□□□ 0.25
ABCF3-213ENST00000480539 GPR153Q6NV75 609 aa16.59■□□□□ 0.25
ABCF3-213ENST00000480539 SLC39A4Q6P5W5 647 aa16.59■□□□□ 0.25
ABCF3-213ENST00000480539 GLB1LQ6UWU2 654 aa16.59■□□□□ 0.25
ABCF3-213ENST00000480539 HACE1Q8IYU2 909 aa16.59■□□□□ 0.25
ABCF3-213ENST00000480539 LRRC43Q8N309 656 aa16.59■□□□□ 0.25
ABCF3-213ENST00000480539 KCNN1Q92952 543 aa16.59■□□□□ 0.25
ABCF3-213ENST00000480539 HVCN1Q96D96 273 aa16.59■□□□□ 0.25
ABCF3-213ENST00000480539 TGS1Q96RS0 853 aaKnown RBP16.59■□□□□ 0.25
ABCF3-213ENST00000480539 TCHPQ9BT92 498 aa16.59■□□□□ 0.25
ABCF3-213ENST00000480539 STRA6Q9BX79 667 aa16.59■□□□□ 0.25
ABCF3-213ENST00000480539 PTPRHQ9HD43 1115 aa16.59■□□□□ 0.25
ABCF3-213ENST00000480539 SNTG2Q9NY99 539 aa16.59■□□□□ 0.25
ABCF3-213ENST00000480539 PARP2Q9UGN5 583 aa16.59■□□□□ 0.25
ABCF3-213ENST00000480539 GDAQ9Y2T3 454 aa16.59■□□□□ 0.25
ABCF3-213ENST00000480539 NLRC5Q86WI3 1866 aa16.59■□□□□ 0.25
ABCF3-213ENST00000480539 PVALEFA0A1B0GWK0 134 aa16.58■□□□□ 0.24
ABCF3-213ENST00000480539 KINO60870 393 aaKnown RBP16.58■□□□□ 0.24
ABCF3-213ENST00000480539 RECQL4O94761 1208 aa16.58■□□□□ 0.24
ABCF3-213ENST00000480539 PRPF6O94906 941 aaKnown RBP16.58■□□□□ 0.24
ABCF3-213ENST00000480539 PIGRP01833 764 aa16.58■□□□□ 0.24
ABCF3-213ENST00000480539 RPN1P04843 607 aaKnown RBP16.58■□□□□ 0.24
ABCF3-213ENST00000480539 LINC00271P0C7V0 271 aa16.58■□□□□ 0.24
ABCF3-213ENST00000480539 ABCD1P33897 745 aa16.58■□□□□ 0.24
ABCF3-213ENST00000480539 AFF1P51825 1210 aaKnown RBP16.58■□□□□ 0.24
ABCF3-213ENST00000480539 OSTNP61366 133 aa16.58■□□□□ 0.24
ABCF3-213ENST00000480539 DPYDQ12882 1025 aa16.58■□□□□ 0.24
ABCF3-213ENST00000480539 PNOCQ13519 176 aa16.58■□□□□ 0.24
ABCF3-213ENST00000480539 GRIN2CQ14957 1233 aa16.58■□□□□ 0.24
ABCF3-213ENST00000480539 POSTNQ15063 836 aa16.58■□□□□ 0.24
ABCF3-213ENST00000480539 KMT5BQ4FZB7 885 aa16.58■□□□□ 0.24
ABCF3-213ENST00000480539 NOMO2Q5JPE7 1267 aa16.58■□□□□ 0.24
ABCF3-213ENST00000480539 SPOUT1Q5T280 376 aaKnown RBP16.58■□□□□ 0.24
ABCF3-213ENST00000480539 ZPBP2Q6X784 338 aa16.58■□□□□ 0.24
ABCF3-213ENST00000480539 CLEC17AQ6ZS10 378 aa16.58■□□□□ 0.24
ABCF3-213ENST00000480539 APBB1IPQ7Z5R6 666 aaPredicted RBP16.58■□□□□ 0.24
ABCF3-213ENST00000480539 GDPD5Q8WTR4 605 aa16.58■□□□□ 0.24
ABCF3-213ENST00000480539 ZFP42Q96MM3 310 aa16.58■□□□□ 0.24
ABCF3-213ENST00000480539 GBP4Q96PP9 640 aa16.58■□□□□ 0.24
ABCF3-213ENST00000480539 ACCSQ96QU6 501 aa16.58■□□□□ 0.24
ABCF3-213ENST00000480539 HAPLN2Q9GZV7 340 aa16.58■□□□□ 0.24
ABCF3-213ENST00000480539 SEMA6BQ9H3T3 888 aa16.58■□□□□ 0.24
ABCF3-213ENST00000480539 KLK14Q9P0G3 267 aa16.58■□□□□ 0.24
ABCF3-213ENST00000480539 ZMYM2Q9UBW7 1377 aa16.58■□□□□ 0.24
ABCF3-213ENST00000480539 RALGAPA2Q2PPJ7 1873 aa16.58■□□□□ 0.24
ABCF3-213ENST00000480539 ARL5CA6NH57 179 aa16.57■□□□□ 0.24
ABCF3-213ENST00000480539 ANKRD63C9JTQ0 380 aa16.57■□□□□ 0.24
ABCF3-213ENST00000480539 OFD1O75665 1012 aa16.57■□□□□ 0.24
ABCF3-213ENST00000480539 MYL1P05976 194 aa16.57■□□□□ 0.24
ABCF3-213ENST00000480539 MCF2P10911 925 aa16.57■□□□□ 0.24
ABCF3-213ENST00000480539 SCNN1GP51170 649 aa16.57■□□□□ 0.24
ABCF3-213ENST00000480539 MCL1Q07820 350 aa16.57■□□□□ 0.24
ABCF3-213ENST00000480539 ALCAMQ13740 583 aa16.57■□□□□ 0.24
ABCF3-213ENST00000480539 SEZ6Q53EL9 994 aa16.57■□□□□ 0.24
ABCF3-213ENST00000480539 LRRC55Q6ZSA7 311 aa16.57■□□□□ 0.24
ABCF3-213ENST00000480539 TMEM192Q8IY95 271 aa16.57■□□□□ 0.24
ABCF3-213ENST00000480539 THNSL1Q8IYQ7 743 aa16.57■□□□□ 0.24
ABCF3-213ENST00000480539 FBXO22Q8NEZ5 403 aa16.57■□□□□ 0.24
ABCF3-213ENST00000480539 URGCPQ8TCY9 931 aa16.57■□□□□ 0.24
ABCF3-213ENST00000480539 ERCC4Q92889 916 aaPredicted RBP16.57■□□□□ 0.24
ABCF3-213ENST00000480539 CCDC34Q96HJ3 373 aa16.57■□□□□ 0.24
ABCF3-213ENST00000480539 GAD1Q99259 594 aa16.57■□□□□ 0.24
ABCF3-213ENST00000480539 MRPL9Q9BYD2 267 aaKnown RBP16.57■□□□□ 0.24
ABCF3-213ENST00000480539 GBP3Q9H0R5 595 aa16.57■□□□□ 0.24
ABCF3-213ENST00000480539 PRDM12Q9H4Q4 367 aa16.57■□□□□ 0.24
ABCF3-213ENST00000480539 SLC39A2Q9NP94 309 aa16.57■□□□□ 0.24
ABCF3-213ENST00000480539 TYW1Q9NV66 732 aaKnown RBP16.57■□□□□ 0.24
ABCF3-213ENST00000480539 TBC1D13Q9NVG8 400 aa16.57■□□□□ 0.24
ABCF3-213ENST00000480539 PCDHB13Q9Y5F0 798 aa16.57■□□□□ 0.24
ABCF3-213ENST00000480539 CDH23Q9H251 3354 aa16.57■□□□□ 0.24
ABCF3-213ENST00000480539 CLDN3O15551 220 aa16.56■□□□□ 0.24
ABCF3-213ENST00000480539 B4GALT3O60512 393 aa16.56■□□□□ 0.24
ABCF3-213ENST00000480539 POMCP01189 267 aa16.56■□□□□ 0.24
ABCF3-213ENST00000480539 PBX3P40426 434 aa16.56■□□□□ 0.24
ABCF3-213ENST00000480539 GRM5P41594 1212 aa16.56■□□□□ 0.24
ABCF3-213ENST00000480539 ERVK-21P61565 698 aa16.56■□□□□ 0.24
ABCF3-213ENST00000480539 RNASELQ05823 741 aaKnown RBP16.56■□□□□ 0.24
ABCF3-213ENST00000480539 EPC2Q52LR7 807 aa16.56■□□□□ 0.24
ABCF3-213ENST00000480539 KANK3Q6NY19 840 aa16.56■□□□□ 0.24
ABCF3-213ENST00000480539 STXBP4Q6ZWJ1 553 aa16.56■□□□□ 0.24
ABCF3-213ENST00000480539 NELFCDQ8IXH7 590 aa16.56■□□□□ 0.24
ABCF3-213ENST00000480539 SYCP3Q8IZU3 236 aa16.56■□□□□ 0.24
ABCF3-213ENST00000480539 CLP1Q92989 425 aaKnown RBP16.56■□□□□ 0.24
ABCF3-213ENST00000480539 RPS6KC1Q96S38 1066 aa16.56■□□□□ 0.24
ABCF3-213ENST00000480539 CWH43Q9H720 699 aa16.56■□□□□ 0.24
ABCF3-213ENST00000480539 UBN1Q9NPG3 1134 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms