RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 OGTO15294 1046 aa13.7□□□□□ -0.22
TRAPPC12-218ENST00000479897 SLC16A3O15427 465 aaKnown RBP13.7□□□□□ -0.22
TRAPPC12-218ENST00000479897 LDHAP00338 332 aaKnown RBP13.7□□□□□ -0.22
TRAPPC12-218ENST00000479897 ZSCAN20P17040 1043 aaPredicted RBP13.7□□□□□ -0.22
TRAPPC12-218ENST00000479897 STX17P56962 302 aa13.7□□□□□ -0.22
TRAPPC12-218ENST00000479897 MCCD1P59942 119 aaPredicted RBP13.7□□□□□ -0.22
TRAPPC12-218ENST00000479897 NFX1Q12986 1120 aaKnown RBP13.7□□□□□ -0.22
TRAPPC12-218ENST00000479897 NCAPHQ15003 741 aa13.7□□□□□ -0.22
TRAPPC12-218ENST00000479897 KYAT1Q16773 422 aa13.7□□□□□ -0.22
TRAPPC12-218ENST00000479897 TMEM132AQ24JP5 1023 aa13.7□□□□□ -0.22
TRAPPC12-218ENST00000479897 UBXN11Q5T124 520 aa13.7□□□□□ -0.22
TRAPPC12-218ENST00000479897 SPATA1Q5VX52 437 aa13.7□□□□□ -0.22
TRAPPC12-218ENST00000479897 CNKSR3Q6P9H4 555 aa13.7□□□□□ -0.22
TRAPPC12-218ENST00000479897 DBF4BQ8NFT6 615 aa13.7□□□□□ -0.22
TRAPPC12-218ENST00000479897 NOC3LQ8WTT2 800 aaKnown RBP13.7□□□□□ -0.22
TRAPPC12-218ENST00000479897 POMGNT1Q8WZA1 660 aa13.7□□□□□ -0.22
TRAPPC12-218ENST00000479897 ZBTB45Q96K62 511 aaPredicted RBP13.7□□□□□ -0.22
TRAPPC12-218ENST00000479897 TSPYL2Q9H2G4 693 aaPredicted RBP13.7□□□□□ -0.22
TRAPPC12-218ENST00000479897 KIAA1586Q9HCI6 787 aa13.7□□□□□ -0.22
TRAPPC12-218ENST00000479897 AGO2Q9UKV8 859 aaKnown RBP13.7□□□□□ -0.22
TRAPPC12-218ENST00000479897 USP20Q9Y2K6 914 aa13.7□□□□□ -0.22
TRAPPC12-218ENST00000479897 CETN3O15182 167 aa13.69□□□□□ -0.22
TRAPPC12-218ENST00000479897 CLIC2O15247 247 aa13.69□□□□□ -0.22
TRAPPC12-218ENST00000479897 EXTL3O43909 919 aa13.69□□□□□ -0.22
TRAPPC12-218ENST00000479897 MGEA5O60502 916 aa13.69□□□□□ -0.22
TRAPPC12-218ENST00000479897 ZNF623O75123 536 aa13.69□□□□□ -0.22
TRAPPC12-218ENST00000479897 FGFR1OPO95684 399 aaKnown RBP13.69□□□□□ -0.22
TRAPPC12-218ENST00000479897 GRM5P41594 1212 aa13.69□□□□□ -0.22
TRAPPC12-218ENST00000479897 MARSP56192 900 aaKnown RBP13.69□□□□□ -0.22
TRAPPC12-218ENST00000479897 ENPEPQ07075 957 aa13.69□□□□□ -0.22
TRAPPC12-218ENST00000479897 PPIGQ13427 754 aaKnown RBP eCLIP13.69□□□□□ -0.229e-7■■□□□ 11.8
TRAPPC12-218ENST00000479897 ADAM9Q13443 819 aa13.69□□□□□ -0.22
TRAPPC12-218ENST00000479897 TWF2Q6IBS0 349 aaKnown RBP13.69□□□□□ -0.22
TRAPPC12-218ENST00000479897 DHX40Q8IX18 779 aaKnown RBP13.69□□□□□ -0.22
TRAPPC12-218ENST00000479897 GPD1LQ8N335 351 aa13.69□□□□□ -0.22
TRAPPC12-218ENST00000479897 CSGALNACT2Q8N6G5 542 aa13.69□□□□□ -0.22
TRAPPC12-218ENST00000479897 AOPEPQ8N6M6 819 aa13.69□□□□□ -0.22
TRAPPC12-218ENST00000479897 XXYLT1Q8NBI6 393 aa13.69□□□□□ -0.22
TRAPPC12-218ENST00000479897 LINC01599Q8WXQ3 324 aa13.69□□□□□ -0.22
TRAPPC12-218ENST00000479897 MSTO1Q9BUK6 570 aa13.69□□□□□ -0.22
TRAPPC12-218ENST00000479897 THAP9Q9H5L6 903 aa13.69□□□□□ -0.22
TRAPPC12-218ENST00000479897 CBX8Q9HC52 389 aa13.69□□□□□ -0.22
TRAPPC12-218ENST00000479897 RGS18Q9NS28 235 aa13.69□□□□□ -0.22
TRAPPC12-218ENST00000479897 C1orf112Q9NSG2 853 aa13.69□□□□□ -0.22
TRAPPC12-218ENST00000479897 NFE2L3Q9Y4A8 694 aa13.69□□□□□ -0.22
TRAPPC12-218ENST00000479897 SMTNL1A8MU46 457 aa13.68□□□□□ -0.22
TRAPPC12-218ENST00000479897 SKIP12755 728 aa13.68□□□□□ -0.22
TRAPPC12-218ENST00000479897 CSF2RAP15509 400 aa13.68□□□□□ -0.22
TRAPPC12-218ENST00000479897 FPGSQ05932 587 aa13.68□□□□□ -0.22
TRAPPC12-218ENST00000479897 CDKAL1Q5VV42 579 aa13.68□□□□□ -0.22
TRAPPC12-218ENST00000479897 FILIP1Q7Z7B0 1213 aa13.68□□□□□ -0.22
TRAPPC12-218ENST00000479897 CDR2LQ86X02 465 aaPredicted RBP13.68□□□□□ -0.22
TRAPPC12-218ENST00000479897 RPUSD2Q8IZ73 545 aaKnown RBP13.68□□□□□ -0.22
TRAPPC12-218ENST00000479897 ADAM2Q99965 735 aa13.68□□□□□ -0.22
TRAPPC12-218ENST00000479897 TCHPQ9BT92 498 aa13.68□□□□□ -0.22
TRAPPC12-218ENST00000479897 EIF2AQ9BY44 585 aaKnown RBP13.68□□□□□ -0.22
TRAPPC12-218ENST00000479897 IL23AQ9NPF7 189 aa13.68□□□□□ -0.22
TRAPPC12-218ENST00000479897 FAM105AQ9NUU6 356 aa13.68□□□□□ -0.22
TRAPPC12-218ENST00000479897 PTPRSQ13332 1948 aa13.68□□□□□ -0.22
TRAPPC12-218ENST00000479897 TRIP11Q15643 1979 aa13.67□□□□□ -0.22
TRAPPC12-218ENST00000479897 A0A0U1RQF3 1178 aa13.67□□□□□ -0.22
TRAPPC12-218ENST00000479897 C9IYK1 514 aa13.67□□□□□ -0.22
TRAPPC12-218ENST00000479897 EXOC3O60645 756 aa13.67□□□□□ -0.22
TRAPPC12-218ENST00000479897 EFCAB14O75071 495 aa13.67□□□□□ -0.22
TRAPPC12-218ENST00000479897 BAIAP3O94812 1187 aa13.67□□□□□ -0.22
TRAPPC12-218ENST00000479897 NPTXRO95502 500 aa13.67□□□□□ -0.22
TRAPPC12-218ENST00000479897 GNA14O95837 355 aa13.67□□□□□ -0.22
TRAPPC12-218ENST00000479897 ADRB2P07550 413 aa13.67□□□□□ -0.22
TRAPPC12-218ENST00000479897 ZNF18P17022 549 aa13.67□□□□□ -0.22
TRAPPC12-218ENST00000479897 PSMC2P35998 433 aaKnown RBP13.67□□□□□ -0.22
TRAPPC12-218ENST00000479897 MATR3P43243 847 aaKnown RBP eCLIP13.67□□□□□ -0.22
TRAPPC12-218ENST00000479897 RGS19P49795 217 aa13.67□□□□□ -0.22
TRAPPC12-218ENST00000479897 CYP2J2P51589 502 aa13.67□□□□□ -0.22
TRAPPC12-218ENST00000479897 FAM189BP81408 668 aa13.67□□□□□ -0.22
TRAPPC12-218ENST00000479897 TCTN1Q2MV58 587 aa13.67□□□□□ -0.22
TRAPPC12-218ENST00000479897 CRELD2Q6UXH1 353 aaPredicted RBP13.67□□□□□ -0.22
TRAPPC12-218ENST00000479897 SLC24A5Q71RS6 500 aa13.67□□□□□ -0.22
TRAPPC12-218ENST00000479897 MRPL10Q7Z7H8 261 aaKnown RBP13.67□□□□□ -0.22
TRAPPC12-218ENST00000479897 FAM114A1Q8IWE2 563 aa13.67□□□□□ -0.22
TRAPPC12-218ENST00000479897 BRSK2Q8IWQ3 736 aa13.67□□□□□ -0.22
TRAPPC12-218ENST00000479897 SMG8Q8ND04 991 aaKnown RBP13.67□□□□□ -0.22
TRAPPC12-218ENST00000479897 TRIM6Q9C030 488 aaPredicted RBP13.67□□□□□ -0.22
TRAPPC12-218ENST00000479897 HSD3B7Q9H2F3 369 aa13.67□□□□□ -0.22
TRAPPC12-218ENST00000479897 PCIF1Q9H4Z3 704 aa13.67□□□□□ -0.22
TRAPPC12-218ENST00000479897 ELAC1Q9H777 363 aaKnown RBP13.67□□□□□ -0.22
TRAPPC12-218ENST00000479897 CPSF3Q9UKF6 684 aaKnown RBP13.67□□□□□ -0.22
TRAPPC12-218ENST00000479897 FRMD4BQ9Y2L6 1034 aa13.67□□□□□ -0.22
TRAPPC12-218ENST00000479897 IPPQ9Y573 584 aa13.67□□□□□ -0.22
TRAPPC12-218ENST00000479897 NR2E3Q9Y5X4 410 aa13.67□□□□□ -0.22
TRAPPC12-218ENST00000479897 ABHD14A-ACY1A0A1B0GW23 586 aa13.66□□□□□ -0.22
TRAPPC12-218ENST00000479897 BECN2A8MW95 431 aa13.66□□□□□ -0.22
TRAPPC12-218ENST00000479897 AKAP3O75969 853 aa13.66□□□□□ -0.22
TRAPPC12-218ENST00000479897 CLTAP09496 248 aa13.66□□□□□ -0.22
TRAPPC12-218ENST00000479897 EPB41P11171 864 aaKnown RBP13.66□□□□□ -0.22
TRAPPC12-218ENST00000479897 ATF7P17544 494 aaPredicted RBP13.66□□□□□ -0.22
TRAPPC12-218ENST00000479897 EEF1GP26641 437 aaKnown RBP13.66□□□□□ -0.22
TRAPPC12-218ENST00000479897 CASP4P49662 377 aa13.66□□□□□ -0.22
TRAPPC12-218ENST00000479897 SPAG1Q07617 926 aa13.66□□□□□ -0.22
TRAPPC12-218ENST00000479897 SNRNP35Q16560 246 aaKnown RBP13.66□□□□□ -0.22
TRAPPC12-218ENST00000479897 TPD52L1Q16890 204 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms