RNA–Protein interactions for RNA: ENST00000479653.5

CCDC18-208, Transcript of coiled-coil domain containing 18, humanhuman

TSL 3

Gene CCDC18, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-208ENST00000479653 IGDCC4Q8TDY8 1250 aa12.55□□□□□ -0.4
CCDC18-208ENST00000479653 ING5Q8WYH8 240 aa12.55□□□□□ -0.4
CCDC18-208ENST00000479653 MCRS1Q96EZ8 462 aa12.55□□□□□ -0.4
CCDC18-208ENST00000479653 COLEC11Q9BWP8 271 aa12.55□□□□□ -0.4
CCDC18-208ENST00000479653 FNIP2Q9P278 1114 aa12.55□□□□□ -0.4
CCDC18-208ENST00000479653 PATJQ8NI35 1801 aa12.55□□□□□ -0.4
CCDC18-208ENST00000479653 DOCK8Q8NF50 2099 aa12.55□□□□□ -0.4
CCDC18-208ENST00000479653 TMEM8BA6NDV4 472 aa12.54□□□□□ -0.4
CCDC18-208ENST00000479653 SHISA7A6NL88 538 aa12.54□□□□□ -0.4
CCDC18-208ENST00000479653 C8AP07357 584 aa12.54□□□□□ -0.4
CCDC18-208ENST00000479653 HNRNPA1P09651 372 aaKnown RBP eCLIP12.54□□□□□ -0.4
CCDC18-208ENST00000479653 NOVA1P51513 510 aaKnown RBP12.54□□□□□ -0.4
CCDC18-208ENST00000479653 NAPAP54920 295 aa12.54□□□□□ -0.4
CCDC18-208ENST00000479653 MRPL10Q7Z7H8 261 aaKnown RBP12.54□□□□□ -0.4
CCDC18-208ENST00000479653 NPAS3Q8IXF0 933 aa12.54□□□□□ -0.4
CCDC18-208ENST00000479653 FAM3CQ92520 227 aa12.54□□□□□ -0.4
CCDC18-208ENST00000479653 KIF12Q96FN5 646 aa12.54□□□□□ -0.4
CCDC18-208ENST00000479653 NLRP4Q96MN2 994 aa12.54□□□□□ -0.4
CCDC18-208ENST00000479653 IER2Q9BTL4 223 aa12.54□□□□□ -0.4
CCDC18-208ENST00000479653 ADAM33Q9BZ11 813 aa12.54□□□□□ -0.4
CCDC18-208ENST00000479653 GPR62Q9BZJ7 368 aa12.54□□□□□ -0.4
CCDC18-208ENST00000479653 BRD9Q9H8M2 597 aa12.54□□□□□ -0.4
CCDC18-208ENST00000479653 SUCLA2Q9P2R7 463 aaPredicted RBP12.54□□□□□ -0.4
CCDC18-208ENST00000479653 CNTNAP2Q9UHC6 1331 aa12.54□□□□□ -0.4
CCDC18-208ENST00000479653 ZNF862O60290 1169 aa12.53□□□□□ -0.4
CCDC18-208ENST00000479653 ECI2O75521 394 aa12.53□□□□□ -0.4
CCDC18-208ENST00000479653 EFEMP2O95967 443 aa12.53□□□□□ -0.4
CCDC18-208ENST00000479653 CYP21A2P08686 494 aa12.53□□□□□ -0.4
CCDC18-208ENST00000479653 ZNF806P0C7X5 589 aa12.53□□□□□ -0.4
CCDC18-208ENST00000479653 ITGA4P13612 1032 aa12.53□□□□□ -0.4
CCDC18-208ENST00000479653 SREBF1P36956 1147 aa12.53□□□□□ -0.4
CCDC18-208ENST00000479653 ADCY7P51828 1080 aa12.53□□□□□ -0.4
CCDC18-208ENST00000479653 PRKCEQ02156 737 aa12.53□□□□□ -0.4
CCDC18-208ENST00000479653 CREMQ03060 361 aa12.53□□□□□ -0.4
CCDC18-208ENST00000479653 GRM2Q14416 872 aa12.53□□□□□ -0.4
CCDC18-208ENST00000479653 PABPC1LQ4VXU2 614 aaKnown RBP12.53□□□□□ -0.4
CCDC18-208ENST00000479653 TANGO2Q6ICL3 276 aa12.53□□□□□ -0.4
CCDC18-208ENST00000479653 FUT10Q6P4F1 479 aa12.53□□□□□ -0.4
CCDC18-208ENST00000479653 PRSS55Q6UWB4 352 aaPredicted RBP12.53□□□□□ -0.4
CCDC18-208ENST00000479653 RAB11FIP4Q86YS3 637 aa12.53□□□□□ -0.4
CCDC18-208ENST00000479653 KSR1Q8IVT5 923 aa12.53□□□□□ -0.4
CCDC18-208ENST00000479653 ZNF687Q8N1G0 1237 aa12.53□□□□□ -0.4
CCDC18-208ENST00000479653 ZCCHC14Q8WYQ9 949 aaKnown RBP12.53□□□□□ -0.4
CCDC18-208ENST00000479653 MBOAT7Q96N66 472 aa12.53□□□□□ -0.4
CCDC18-208ENST00000479653 LNPKQ9C0E8 428 aa12.53□□□□□ -0.4
CCDC18-208ENST00000479653 UBN1Q9NPG3 1134 aa12.53□□□□□ -0.4
CCDC18-208ENST00000479653 RIC8AQ9NPQ8 531 aa12.53□□□□□ -0.4
CCDC18-208ENST00000479653 HCFC1R1Q9NWW0 138 aa12.53□□□□□ -0.4
CCDC18-208ENST00000479653 MRPS23Q9Y3D9 190 aaKnown RBP12.53□□□□□ -0.4
CCDC18-208ENST00000479653 WDFY3Q8IZQ1 3526 aa12.53□□□□□ -0.4
CCDC18-208ENST00000479653 SMCO2A6NFE2 343 aa12.52□□□□□ -0.41
CCDC18-208ENST00000479653 CCDC69A6NI79 296 aa12.52□□□□□ -0.41
CCDC18-208ENST00000479653 E7EWF7 191 aa12.52□□□□□ -0.41
CCDC18-208ENST00000479653 GIPC1O14908 333 aa12.52□□□□□ -0.41
CCDC18-208ENST00000479653 TADA2AO75478 443 aa12.52□□□□□ -0.41
CCDC18-208ENST00000479653 TOP3BO95985 862 aaKnown RBP12.52□□□□□ -0.41
CCDC18-208ENST00000479653 ANTXR2P58335 489 aa12.52□□□□□ -0.41
CCDC18-208ENST00000479653 MTERF2Q49AM1 385 aa12.52□□□□□ -0.41
CCDC18-208ENST00000479653 RNF43Q68DV7 783 aa12.52□□□□□ -0.41
CCDC18-208ENST00000479653 WWC2Q6AWC2 1192 aa12.52□□□□□ -0.41
CCDC18-208ENST00000479653 ZNF410Q86VK4 478 aa12.52□□□□□ -0.41
CCDC18-208ENST00000479653 CEP57Q86XR8 500 aa12.52□□□□□ -0.41
CCDC18-208ENST00000479653 RABGGTAQ92696 567 aa12.52□□□□□ -0.41
CCDC18-208ENST00000479653 DNASE1L2Q92874 299 aa12.52□□□□□ -0.41
CCDC18-208ENST00000479653 GAD1Q99259 594 aa12.52□□□□□ -0.41
CCDC18-208ENST00000479653 SH2D3AQ9BRG2 576 aa12.52□□□□□ -0.41
CCDC18-208ENST00000479653 SMOC1Q9H4F8 434 aa12.52□□□□□ -0.41
CCDC18-208ENST00000479653 AGPAT5Q9NUQ2 364 aa12.52□□□□□ -0.41
CCDC18-208ENST00000479653 DNMT3BQ9UBC3 853 aaKnown RBP12.52□□□□□ -0.41
CCDC18-208ENST00000479653 FBXW11Q9UKB1 542 aa12.52□□□□□ -0.41
CCDC18-208ENST00000479653 FARP1Q9Y4F1 1045 aaPredicted RBP12.52□□□□□ -0.41
CCDC18-208ENST00000479653 IGLV3-22A0A075B6J6 115 aa12.51□□□□□ -0.41
CCDC18-208ENST00000479653 ARL5CA6NH57 179 aa12.51□□□□□ -0.41
CCDC18-208ENST00000479653 WDR64B1ANS9 1081 aa12.51□□□□□ -0.41
CCDC18-208ENST00000479653 TAF4O00268 1085 aa12.51□□□□□ -0.41
CCDC18-208ENST00000479653 IGHDP01880 384 aa12.51□□□□□ -0.41
CCDC18-208ENST00000479653 MLH1P40692 756 aa12.51□□□□□ -0.41
CCDC18-208ENST00000479653 RBM25P49756 843 aaKnown RBP12.51□□□□□ -0.41
CCDC18-208ENST00000479653 SCNN1GP51170 649 aa12.51□□□□□ -0.41
CCDC18-208ENST00000479653 ZNF252P-AS1Q0IIN9 211 aa12.51□□□□□ -0.41
CCDC18-208ENST00000479653 GAS6Q14393 721 aa12.51□□□□□ -0.41
CCDC18-208ENST00000479653 UGCGQ16739 394 aa12.51□□□□□ -0.41
CCDC18-208ENST00000479653 JAKMIP3Q5VZ66 844 aa12.51□□□□□ -0.41
CCDC18-208ENST00000479653 TYW1BQ6NUM6 668 aa12.51□□□□□ -0.41
CCDC18-208ENST00000479653 CASC1Q6TDU7 716 aa12.51□□□□□ -0.41
CCDC18-208ENST00000479653 SMC5Q8IY18 1101 aa12.51□□□□□ -0.41
CCDC18-208ENST00000479653 SPEM1Q8N4L4 309 aa12.51□□□□□ -0.41
CCDC18-208ENST00000479653 SLC7A14Q8TBB6 771 aa12.51□□□□□ -0.41
CCDC18-208ENST00000479653 TRMT61BQ9BVS5 477 aaKnown RBP12.51□□□□□ -0.41
CCDC18-208ENST00000479653 SCNM1Q9BWG6 230 aa12.51□□□□□ -0.41
CCDC18-208ENST00000479653 TMEM121BQ9BXQ6 578 aaPredicted RBP12.51□□□□□ -0.41
CCDC18-208ENST00000479653 DISC1Q9NRI5 854 aa12.51□□□□□ -0.41
CCDC18-208ENST00000479653 MIOSQ9NXC5 875 aa12.51□□□□□ -0.41
CCDC18-208ENST00000479653 SEPT9Q9UHD8 586 aaPredicted RBP12.51□□□□□ -0.41
CCDC18-208ENST00000479653 KCNH3Q9ULD8 1083 aa12.51□□□□□ -0.41
CCDC18-208ENST00000479653 TAF6LQ9Y6J9 622 aa12.51□□□□□ -0.41
CCDC18-208ENST00000479653 PIAS3Q9Y6X2 628 aa12.51□□□□□ -0.41
CCDC18-208ENST00000479653 ITPR1Q14643 2758 aa12.51□□□□□ -0.41
CCDC18-208ENST00000479653 CHMP2AO43633 222 aa12.5□□□□□ -0.41
CCDC18-208ENST00000479653 CALM1P0DP23 149 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms