RNA–Protein interactions for RNA: ENST00000478890.5

SRRM1-211, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-211ENST00000478890 MRPL49Q13405 166 aaKnown RBP2.03□□□□□ -2.08
SRRM1-211ENST00000478890 CCDC178Q5BJE1 867 aa2.03□□□□□ -2.08
SRRM1-211ENST00000478890 RRP12Q5JTH9 1297 aaKnown RBP2.03□□□□□ -2.08
SRRM1-211ENST00000478890 C1QL3Q5VWW1 255 aa2.03□□□□□ -2.08
SRRM1-211ENST00000478890 CREB3L3Q68CJ9 461 aa2.03□□□□□ -2.08
SRRM1-211ENST00000478890 EFCAB12Q6NXP0 572 aa2.03□□□□□ -2.08
SRRM1-211ENST00000478890 FRMD7Q6ZUT3 714 aa2.03□□□□□ -2.08
SRRM1-211ENST00000478890 C16orf86Q6ZW13 317 aa2.03□□□□□ -2.08
SRRM1-211ENST00000478890 FKBP9P1Q75LS8 142 aa2.03□□□□□ -2.08
SRRM1-211ENST00000478890 CXorf67Q86X51 503 aaPredicted RBP2.03□□□□□ -2.08
SRRM1-211ENST00000478890 KIF18BQ86Y91 864 aa2.03□□□□□ -2.08
SRRM1-211ENST00000478890 PLXDC1Q8IUK5 500 aa2.03□□□□□ -2.08
SRRM1-211ENST00000478890 MSL3Q8N5Y2 521 aaKnown RBP2.03□□□□□ -2.08
SRRM1-211ENST00000478890 BEND2Q8NDZ0 799 aa2.03□□□□□ -2.08
SRRM1-211ENST00000478890 GPR150Q8NGU9 434 aa2.03□□□□□ -2.08
SRRM1-211ENST00000478890 OR14C36Q8NHC7 312 aa2.03□□□□□ -2.08
SRRM1-211ENST00000478890 MDM1Q8TC05 714 aa2.03□□□□□ -2.08
SRRM1-211ENST00000478890 LEO1Q8WVC0 666 aaPredicted RBP2.03□□□□□ -2.08
SRRM1-211ENST00000478890 NINJ1Q92982 152 aa2.03□□□□□ -2.08
SRRM1-211ENST00000478890 USP7Q93009 1102 aa2.03□□□□□ -2.08
SRRM1-211ENST00000478890 LENG9Q96B70 501 aa2.03□□□□□ -2.08
SRRM1-211ENST00000478890 DRC1Q96MC2 740 aa2.03□□□□□ -2.08
SRRM1-211ENST00000478890 PDCD2LQ9BRP1 358 aa2.03□□□□□ -2.08
SRRM1-211ENST00000478890 SOX7Q9BT81 388 aa2.03□□□□□ -2.08
SRRM1-211ENST00000478890 NDC1Q9BTX1 674 aa2.03□□□□□ -2.08
SRRM1-211ENST00000478890 TARS2Q9BW92 718 aaKnown RBP2.03□□□□□ -2.08
SRRM1-211ENST00000478890 SLC46A2Q9BY10 475 aa2.03□□□□□ -2.08
SRRM1-211ENST00000478890 CPEB1Q9BZB8 566 aaKnown RBP2.03□□□□□ -2.08
SRRM1-211ENST00000478890 REXO4Q9GZR2 422 aaKnown RBP2.03□□□□□ -2.08
SRRM1-211ENST00000478890 MS4A5Q9H3V2 200 aa2.03□□□□□ -2.08
SRRM1-211ENST00000478890 ZNF768Q9H5H4 540 aaKnown RBP2.03□□□□□ -2.08
SRRM1-211ENST00000478890 AKIP1Q9NQ31 210 aa2.03□□□□□ -2.08
SRRM1-211ENST00000478890 SPTLC3Q9NUV7 552 aa2.03□□□□□ -2.08
SRRM1-211ENST00000478890 ZBTB21Q9ULJ3 1066 aa2.03□□□□□ -2.08
SRRM1-211ENST00000478890 PPP2R3BQ9Y5P8 575 aa2.03□□□□□ -2.08
SRRM1-211ENST00000478890 NISCHQ9Y2I1 1504 aa2.02□□□□□ -2.09
SRRM1-211ENST00000478890 CENPVL1A0A0U1RR11 272 aa2.02□□□□□ -2.09
SRRM1-211ENST00000478890 GAGE12BA1L429 117 aa2.02□□□□□ -2.09
SRRM1-211ENST00000478890 PRSS38A1L453 326 aa2.02□□□□□ -2.09
SRRM1-211ENST00000478890 GAGE12HA6NDE8 117 aa2.02□□□□□ -2.09
SRRM1-211ENST00000478890 ZAR1LA6NP61 321 aa2.02□□□□□ -2.09
SRRM1-211ENST00000478890 DIRC3C9JPN6 131 aa2.02□□□□□ -2.09
SRRM1-211ENST00000478890 MASP2O00187 686 aa2.02□□□□□ -2.09
SRRM1-211ENST00000478890 SEC24DO94855 1032 aaPredicted RBP2.02□□□□□ -2.09
SRRM1-211ENST00000478890 LMNAP02545 664 aaKnown RBP2.02□□□□□ -2.09
SRRM1-211ENST00000478890 LPLP06858 475 aa2.02□□□□□ -2.09
SRRM1-211ENST00000478890 LTA4HP09960 611 aaKnown RBP2.02□□□□□ -2.09
SRRM1-211ENST00000478890 RBP3P10745 1247 aa2.02□□□□□ -2.09
SRRM1-211ENST00000478890 ITGAMP11215 1152 aa2.02□□□□□ -2.09
SRRM1-211ENST00000478890 KRT4P19013 534 aa2.02□□□□□ -2.09
SRRM1-211ENST00000478890 DDX6P26196 483 aaKnown RBP eCLIP2.02□□□□□ -2.09
SRRM1-211ENST00000478890 LGALS4P56470 323 aa2.02□□□□□ -2.09
SRRM1-211ENST00000478890 PER3P56645 1201 aa2.02□□□□□ -2.09
SRRM1-211ENST00000478890 CCT2P78371 535 aaKnown RBP2.02□□□□□ -2.09
SRRM1-211ENST00000478890 MEF2AQ02078 507 aaPredicted RBP2.02□□□□□ -2.09
SRRM1-211ENST00000478890 PCBP1Q15365 356 aaKnown RBP eCLIP2.02□□□□□ -2.09
SRRM1-211ENST00000478890 UBE3CQ15386 1083 aa2.02□□□□□ -2.09
SRRM1-211ENST00000478890 TKFCQ3LXA3 575 aa2.02□□□□□ -2.09
SRRM1-211ENST00000478890 SPDYE7PQ495Y7 208 aa2.02□□□□□ -2.09
SRRM1-211ENST00000478890 ATP13A4Q4VNC1 1196 aa2.02□□□□□ -2.09
SRRM1-211ENST00000478890 CT47A1Q5JQC4 288 aaPredicted RBP2.02□□□□□ -2.09
SRRM1-211ENST00000478890 GPR158Q5T848 1215 aa2.02□□□□□ -2.09
SRRM1-211ENST00000478890 BROXQ5VW32 411 aa2.02□□□□□ -2.09
SRRM1-211ENST00000478890 NAIF1Q69YI7 327 aaPredicted RBP2.02□□□□□ -2.09
SRRM1-211ENST00000478890 FAM180AQ6UWF9 173 aa2.02□□□□□ -2.09
SRRM1-211ENST00000478890 HTR3DQ70Z44 454 aa2.02□□□□□ -2.09
SRRM1-211ENST00000478890 DOK3Q7L591 496 aa2.02□□□□□ -2.09
SRRM1-211ENST00000478890 TAS1R1Q7RTX1 841 aa2.02□□□□□ -2.09
SRRM1-211ENST00000478890 SLC44A3Q8N4M1 653 aa2.02□□□□□ -2.09
SRRM1-211ENST00000478890 ZNF610Q8N9Z0 462 aa2.02□□□□□ -2.09
SRRM1-211ENST00000478890 SMC1BQ8NDV3 1235 aa2.02□□□□□ -2.09
SRRM1-211ENST00000478890 CPEB3Q8NE35 698 aaKnown RBP2.02□□□□□ -2.09
SRRM1-211ENST00000478890 FBXO18Q8NFZ0 1043 aa2.02□□□□□ -2.09
SRRM1-211ENST00000478890 OR52N2Q8NGI0 321 aa2.02□□□□□ -2.09
SRRM1-211ENST00000478890 ZFP28Q8NHY6 868 aa2.02□□□□□ -2.09
SRRM1-211ENST00000478890 ZNF480Q8WV37 535 aa2.02□□□□□ -2.09
SRRM1-211ENST00000478890 SLC5A5Q92911 643 aa2.02□□□□□ -2.09
SRRM1-211ENST00000478890 MFSD3Q96ES6 412 aa2.02□□□□□ -2.09
SRRM1-211ENST00000478890 ZNF496Q96IT1 587 aaPredicted RBP2.02□□□□□ -2.09
SRRM1-211ENST00000478890 FDXACB1Q9BRP7 624 aaPredicted RBP2.02□□□□□ -2.09
SRRM1-211ENST00000478890 LSM14BQ9BX40 385 aaKnown RBP2.02□□□□□ -2.09
SRRM1-211ENST00000478890 WDR11Q9BZH6 1224 aa2.02□□□□□ -2.09
SRRM1-211ENST00000478890 KCTD10Q9H3F6 313 aa2.02□□□□□ -2.09
SRRM1-211ENST00000478890 KIAA1586Q9HCI6 787 aa2.02□□□□□ -2.09
SRRM1-211ENST00000478890 ADARB2Q9NS39 739 aaKnown RBP2.02□□□□□ -2.09
SRRM1-211ENST00000478890 EVLQ9UI08 416 aaPredicted RBP2.02□□□□□ -2.09
SRRM1-211ENST00000478890 EDARQ9UNE0 448 aa2.02□□□□□ -2.09
SRRM1-211ENST00000478890 PLAAQ9Y263 795 aa2.02□□□□□ -2.09
SRRM1-211ENST00000478890 USP15Q9Y4E8 981 aaPredicted RBP2.02□□□□□ -2.09
SRRM1-211ENST00000478890 NOX1Q9Y5S8 564 aa2.02□□□□□ -2.09
SRRM1-211ENST00000478890 ZMYM3Q14202 1370 aa2.01□□□□□ -2.09
SRRM1-211ENST00000478890 GRXCR1A8MXD5 290 aa2.01□□□□□ -2.09
SRRM1-211ENST00000478890 AHRRA9YTQ3 701 aa2.01□□□□□ -2.09
SRRM1-211ENST00000478890 LEFTY2O00292 366 aa2.01□□□□□ -2.09
SRRM1-211ENST00000478890 KIAA0355O15063 1070 aa2.01□□□□□ -2.09
SRRM1-211ENST00000478890 TGM5O43548 720 aa2.01□□□□□ -2.09
SRRM1-211ENST00000478890 AKR1B10O60218 316 aa2.01□□□□□ -2.09
SRRM1-211ENST00000478890 PDE8AO60658 829 aa2.01□□□□□ -2.09
SRRM1-211ENST00000478890 ERN1O75460 977 aaKnown RBP2.01□□□□□ -2.09
SRRM1-211ENST00000478890 HKR1P10072 659 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms