RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 VCAM1P19320 739 aa5.17□□□□□ -1.58
SMARCA1-204ENST00000478420 COMTP21964 271 aa5.17□□□□□ -1.58
SMARCA1-204ENST00000478420 APBA1Q02410 837 aa5.17□□□□□ -1.58
SMARCA1-204ENST00000478420 FOXL1Q12952 345 aa5.17□□□□□ -1.58
SMARCA1-204ENST00000478420 ICAM4Q14773 271 aa5.17□□□□□ -1.58
SMARCA1-204ENST00000478420 UAP1L1Q3KQV9 507 aa5.17□□□□□ -1.58
SMARCA1-204ENST00000478420 MIGA2Q7L4E1 593 aa5.17□□□□□ -1.58
SMARCA1-204ENST00000478420 PQLC1Q8N2U9 271 aa5.17□□□□□ -1.58
SMARCA1-204ENST00000478420 LILRA3Q8N6C8 439 aaPredicted RBP5.17□□□□□ -1.58
SMARCA1-204ENST00000478420 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.17□□□□□ -1.58
SMARCA1-204ENST00000478420 MDM1Q8TC05 714 aa5.17□□□□□ -1.58
SMARCA1-204ENST00000478420 Q8TCH9 128 aa5.17□□□□□ -1.58
SMARCA1-204ENST00000478420 DPF2Q92785 391 aa5.17□□□□□ -1.58
SMARCA1-204ENST00000478420 HOXB13Q92826 284 aaPredicted RBP5.17□□□□□ -1.58
SMARCA1-204ENST00000478420 HDAC10Q969S8 669 aa5.17□□□□□ -1.58
SMARCA1-204ENST00000478420 COA7Q96BR5 231 aa5.17□□□□□ -1.58
SMARCA1-204ENST00000478420 HSPBAP1Q96EW2 488 aa5.17□□□□□ -1.58
SMARCA1-204ENST00000478420 DEF6Q9H4E7 631 aa5.17□□□□□ -1.58
SMARCA1-204ENST00000478420 METTL14Q9HCE5 456 aaKnown RBP5.17□□□□□ -1.58
SMARCA1-204ENST00000478420 TCEAL9Q9UHQ7 104 aa5.17□□□□□ -1.58
SMARCA1-204ENST00000478420 ZNF180Q9UJW8 692 aa5.17□□□□□ -1.58
SMARCA1-204ENST00000478420 G3BP2Q9UN86 482 aaKnown RBP5.17□□□□□ -1.58
SMARCA1-204ENST00000478420 ANKRD6Q9Y2G4 727 aa5.17□□□□□ -1.58
SMARCA1-204ENST00000478420 CCDC154A6NI56 674 aa5.16□□□□□ -1.58
SMARCA1-204ENST00000478420 ADCY6O43306 1168 aa5.16□□□□□ -1.58
SMARCA1-204ENST00000478420 HOXA3O43365 443 aaPredicted RBP5.16□□□□□ -1.58
SMARCA1-204ENST00000478420 HMGB1P09429 215 aaKnown RBP5.16□□□□□ -1.58
SMARCA1-204ENST00000478420 PF4V1P10720 104 aa5.16□□□□□ -1.58
SMARCA1-204ENST00000478420 ZSCAN20P17040 1043 aaPredicted RBP5.16□□□□□ -1.58
SMARCA1-204ENST00000478420 GNAT2P19087 354 aa5.16□□□□□ -1.58
SMARCA1-204ENST00000478420 PTPN7P35236 360 aa5.16□□□□□ -1.58
SMARCA1-204ENST00000478420 MRPL49Q13405 166 aaKnown RBP5.16□□□□□ -1.58
SMARCA1-204ENST00000478420 SEPT2Q15019 361 aa5.16□□□□□ -1.58
SMARCA1-204ENST00000478420 SGMS1Q86VZ5 419 aa5.16□□□□□ -1.58
SMARCA1-204ENST00000478420 RHOT1Q8IXI2 618 aa5.16□□□□□ -1.58
SMARCA1-204ENST00000478420 TTC9BQ8N6N2 239 aa5.16□□□□□ -1.58
SMARCA1-204ENST00000478420 OR2I1PQ8NGU4 316 aa5.16□□□□□ -1.58
SMARCA1-204ENST00000478420 CYFIP2Q96F07 1278 aa5.16□□□□□ -1.58
SMARCA1-204ENST00000478420 FAM89AQ96GI7 184 aa5.16□□□□□ -1.58
SMARCA1-204ENST00000478420 CAMKK2Q96RR4 588 aa5.16□□□□□ -1.58
SMARCA1-204ENST00000478420 NUP88Q99567 741 aaPredicted RBP5.16□□□□□ -1.58
SMARCA1-204ENST00000478420 SENP6Q9GZR1 1112 aaPredicted RBP5.16□□□□□ -1.58
SMARCA1-204ENST00000478420 CDH19Q9H159 772 aa5.16□□□□□ -1.58
SMARCA1-204ENST00000478420 MANSC1Q9H8J5 431 aa5.16□□□□□ -1.58
SMARCA1-204ENST00000478420 LANCL2Q9NS86 450 aa5.16□□□□□ -1.58
SMARCA1-204ENST00000478420 SMPD4Q9NXE4 827 aa5.16□□□□□ -1.58
SMARCA1-204ENST00000478420 ZIM2Q9NZV7 527 aa5.16□□□□□ -1.58
SMARCA1-204ENST00000478420 SH3BP1Q9Y3L3 701 aa5.16□□□□□ -1.58
SMARCA1-204ENST00000478420 TCAF1Q9Y4C2 921 aa5.16□□□□□ -1.58
SMARCA1-204ENST00000478420 EID1Q9Y6B2 187 aa5.16□□□□□ -1.58
SMARCA1-204ENST00000478420 HTRA2O43464 458 aaPredicted RBP5.15□□□□□ -1.59
SMARCA1-204ENST00000478420 MFAP3LO75121 409 aa5.15□□□□□ -1.59
SMARCA1-204ENST00000478420 STC2O76061 302 aa5.15□□□□□ -1.59
SMARCA1-204ENST00000478420 IPO13O94829 963 aaKnown RBP5.15□□□□□ -1.59
SMARCA1-204ENST00000478420 HSP90B1P14625 803 aaKnown RBP5.15□□□□□ -1.59
SMARCA1-204ENST00000478420 ACO1P21399 889 aaKnown RBP5.15□□□□□ -1.59
SMARCA1-204ENST00000478420 SREBF1P36956 1147 aa5.15□□□□□ -1.59
SMARCA1-204ENST00000478420 ELAVL1Q15717 326 aaKnown RBP5.15□□□□□ -1.59
SMARCA1-204ENST00000478420 FAM214AQ32MH5 1076 aa5.15□□□□□ -1.59
SMARCA1-204ENST00000478420 PRAMEF14Q5SWL7 426 aa5.15□□□□□ -1.59
SMARCA1-204ENST00000478420 APBB1IPQ7Z5R6 666 aaPredicted RBP5.15□□□□□ -1.59
SMARCA1-204ENST00000478420 RAVER1Q8IY67 606 aaKnown RBP5.15□□□□□ -1.59
SMARCA1-204ENST00000478420 TRMT2AQ8IZ69 625 aaKnown RBP5.15□□□□□ -1.59
SMARCA1-204ENST00000478420 ANKRD35Q8N283 1001 aa5.15□□□□□ -1.59
SMARCA1-204ENST00000478420 REPS2Q8NFH8 660 aa5.15□□□□□ -1.59
SMARCA1-204ENST00000478420 CCHCR1Q8TD31 782 aa5.15□□□□□ -1.59
SMARCA1-204ENST00000478420 JPH3Q8WXH2 748 aaPredicted RBP5.15□□□□□ -1.59
SMARCA1-204ENST00000478420 BORCS6Q96GS4 357 aa5.15□□□□□ -1.59
SMARCA1-204ENST00000478420 PDCD2LQ9BRP1 358 aa5.15□□□□□ -1.59
SMARCA1-204ENST00000478420 RHOBTB2Q9BYZ6 727 aa5.15□□□□□ -1.59
SMARCA1-204ENST00000478420 CD248Q9HCU0 757 aa5.15□□□□□ -1.59
SMARCA1-204ENST00000478420 TMEM140Q9NV12 185 aa5.15□□□□□ -1.59
SMARCA1-204ENST00000478420 KLHL42Q9P2K6 505 aa5.15□□□□□ -1.59
SMARCA1-204ENST00000478420 SERPINB13Q9UIV8 391 aa5.15□□□□□ -1.59
SMARCA1-204ENST00000478420 ST6GALNAC2Q9UJ37 374 aa5.15□□□□□ -1.59
SMARCA1-204ENST00000478420 LIMCH1Q9UPQ0 1083 aa5.15□□□□□ -1.59
SMARCA1-204ENST00000478420 HDAC5Q9UQL6 1122 aa5.15□□□□□ -1.59
SMARCA1-204ENST00000478420 IPPQ9Y573 584 aa5.15□□□□□ -1.59
SMARCA1-204ENST00000478420 ZMYM3Q14202 1370 aa5.15□□□□□ -1.59
SMARCA1-204ENST00000478420 B5MCH6 92 aa5.14□□□□□ -1.59
SMARCA1-204ENST00000478420 DTNBO60941 627 aa5.14□□□□□ -1.59
SMARCA1-204ENST00000478420 RPLP2P05387 115 aaKnown RBP5.14□□□□□ -1.59
SMARCA1-204ENST00000478420 IL2RBP14784 551 aa5.14□□□□□ -1.59
SMARCA1-204ENST00000478420 AKAP5P24588 427 aa5.14□□□□□ -1.59
SMARCA1-204ENST00000478420 SLC6A9P48067 706 aa5.14□□□□□ -1.59
SMARCA1-204ENST00000478420 FLT3LGP49771 235 aa5.14□□□□□ -1.59
SMARCA1-204ENST00000478420 SELENOPP49908 381 aa5.14□□□□□ -1.59
SMARCA1-204ENST00000478420 PPP2R5AQ15172 486 aa5.14□□□□□ -1.59
SMARCA1-204ENST00000478420 NFE2Q16621 373 aaPredicted RBP5.14□□□□□ -1.59
SMARCA1-204ENST00000478420 FAM47AQ5JRC9 791 aa5.14□□□□□ -1.59
SMARCA1-204ENST00000478420 PPP4R3AQ6IN85 833 aa5.14□□□□□ -1.59
SMARCA1-204ENST00000478420 ZNF585AQ6P3V2 769 aa5.14□□□□□ -1.59
SMARCA1-204ENST00000478420 ZNF572Q7Z3I7 529 aaPredicted RBP5.14□□□□□ -1.59
SMARCA1-204ENST00000478420 FAM83AQ86UY5 434 aa5.14□□□□□ -1.59
SMARCA1-204ENST00000478420 GSPT2Q8IYD1 628 aaKnown RBP5.14□□□□□ -1.59
SMARCA1-204ENST00000478420 ST8SIA2Q92186 375 aa5.14□□□□□ -1.59
SMARCA1-204ENST00000478420 MIEF2Q96C03 454 aa5.14□□□□□ -1.59
SMARCA1-204ENST00000478420 C8orf49Q96NF6 230 aa5.14□□□□□ -1.59
SMARCA1-204ENST00000478420 WWC2-AS2Q96NR7 200 aa5.14□□□□□ -1.59
SMARCA1-204ENST00000478420 RTFDC1Q9BY42 306 aaPredicted RBP5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms