RNA–Protein interactions for RNA: ENST00000478282.1

U2AF1-210, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 3,344 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-210ENST00000478282 CDC42EP4Q9H3Q1 356 aaKnown RBP15.96■□□□□ 0.15
U2AF1-210ENST00000478282 PRKAG3Q9UGI9 489 aa15.96■□□□□ 0.15
U2AF1-210ENST00000478282 NFKBIEO00221 500 aa15.96■□□□□ 0.15
U2AF1-210ENST00000478282 ATP5DP30049 168 aa15.96■□□□□ 0.15
U2AF1-210ENST00000478282 LACTBP83111 547 aaPredicted RBP15.96■□□□□ 0.15
U2AF1-210ENST00000478282 ARHGAP4P98171 946 aa15.96■□□□□ 0.15
U2AF1-210ENST00000478282 DDX23Q9BUQ8 820 aaKnown RBP15.96■□□□□ 0.15
U2AF1-210ENST00000478282 PTPN22Q9Y2R2 807 aa15.96■□□□□ 0.15
U2AF1-210ENST00000478282 SUGT1Q9Y2Z0 365 aa15.96■□□□□ 0.15
U2AF1-210ENST00000478282 STK24Q9Y6E0 443 aa15.96■□□□□ 0.15
U2AF1-210ENST00000478282 GAKO14976 1311 aa15.96■□□□□ 0.15
U2AF1-210ENST00000478282 KIF3CO14782 793 aa15.96■□□□□ 0.14
U2AF1-210ENST00000478282 SMNDC1O75940 238 aaKnown RBP eCLIP15.96■□□□□ 0.14
U2AF1-210ENST00000478282 DHX37Q8IY37 1157 aaKnown RBP15.96■□□□□ 0.14
U2AF1-210ENST00000478282 CRYGNQ8WXF5 182 aa15.96■□□□□ 0.14
U2AF1-210ENST00000478282 ADAM22Q9P0K1 906 aa15.96■□□□□ 0.14
U2AF1-210ENST00000478282 MTUS1Q9ULD2 1270 aa15.96■□□□□ 0.14
U2AF1-210ENST00000478282 TCRBV7S2A1N4TA0A589 114 aa15.95■□□□□ 0.14
U2AF1-210ENST00000478282 COMTP21964 271 aa15.95■□□□□ 0.14
U2AF1-210ENST00000478282 GCKP35557 465 aa15.95■□□□□ 0.14
U2AF1-210ENST00000478282 CALCOCO2Q13137 446 aa15.95■□□□□ 0.14
U2AF1-210ENST00000478282 RRP1BQ14684 758 aaKnown RBP15.95■□□□□ 0.14
U2AF1-210ENST00000478282 CDCA2Q69YH5 1023 aaPredicted RBP15.95■□□□□ 0.14
U2AF1-210ENST00000478282 SLF2Q8IX21 1173 aa15.95■□□□□ 0.14
U2AF1-210ENST00000478282 SLC20A1Q8WUM9 679 aa15.95■□□□□ 0.14
U2AF1-210ENST00000478282 SYT17Q9BSW7 474 aa15.95■□□□□ 0.14
U2AF1-210ENST00000478282 RABGAP1Q9Y3P9 1069 aa15.95■□□□□ 0.14
U2AF1-210ENST00000478282 LIN7AO14910 233 aaPredicted RBP15.95■□□□□ 0.14
U2AF1-210ENST00000478282 EYA4O95677 639 aa15.95■□□□□ 0.14
U2AF1-210ENST00000478282 FTLP02792 175 aaPredicted RBP15.95■□□□□ 0.14
U2AF1-210ENST00000478282 PYGMP11217 842 aa15.95■□□□□ 0.14
U2AF1-210ENST00000478282 ATP2A2P16615 1042 aaKnown RBP15.95■□□□□ 0.14
U2AF1-210ENST00000478282 CCNG1P51959 295 aa15.95■□□□□ 0.14
U2AF1-210ENST00000478282 ATP11AP98196 1134 aa15.95■□□□□ 0.14
U2AF1-210ENST00000478282 MYL7Q01449 175 aa15.95■□□□□ 0.14
U2AF1-210ENST00000478282 CYP4A11Q02928 519 aa15.95■□□□□ 0.14
U2AF1-210ENST00000478282 QRICH1Q2TAL8 776 aa15.95■□□□□ 0.14
U2AF1-210ENST00000478282 Q4G0T1 1027 aa15.95■□□□□ 0.14
U2AF1-210ENST00000478282 SLC13A5Q86YT5 568 aaPredicted RBP15.95■□□□□ 0.14
U2AF1-210ENST00000478282 ANKRD42Q8N9B4 389 aa15.95■□□□□ 0.14
U2AF1-210ENST00000478282 WNT8AQ9H1J5 351 aa15.95■□□□□ 0.14
U2AF1-210ENST00000478282 PCDHA1Q9Y5I3 950 aa15.95■□□□□ 0.14
U2AF1-210ENST00000478282 SFI1A8K8P3 1242 aa15.94■□□□□ 0.14
U2AF1-210ENST00000478282 FOXN3O00409 490 aaPredicted RBP15.94■□□□□ 0.14
U2AF1-210ENST00000478282 LRRN2O75325 713 aa15.94■□□□□ 0.14
U2AF1-210ENST00000478282 ACSL3O95573 720 aa15.94■□□□□ 0.14
U2AF1-210ENST00000478282 TRIM49P0CI25 452 aa15.94■□□□□ 0.14
U2AF1-210ENST00000478282 TRIM49CP0CI26 452 aa15.94■□□□□ 0.14
U2AF1-210ENST00000478282 NMT1P30419 496 aaKnown RBP15.94■□□□□ 0.14
U2AF1-210ENST00000478282 SKIV2L2P42285 1042 aaKnown RBP15.94■□□□□ 0.14
U2AF1-210ENST00000478282 AP3B2Q13367 1082 aa15.94■□□□□ 0.14
U2AF1-210ENST00000478282 ANKRD20A2Q5SQ80 823 aa15.94■□□□□ 0.14
U2AF1-210ENST00000478282 ANKRD20A1Q5TYW2 823 aa15.94■□□□□ 0.14
U2AF1-210ENST00000478282 ANKRD20A3Q5VUR7 823 aa15.94■□□□□ 0.14
U2AF1-210ENST00000478282 CAPRIN2Q6IMN6 1127 aaKnown RBP15.94■□□□□ 0.14
U2AF1-210ENST00000478282 ARMC2Q8NEN0 867 aa15.94■□□□□ 0.14
U2AF1-210ENST00000478282 LENG9Q96B70 501 aa15.94■□□□□ 0.14
U2AF1-210ENST00000478282 AAASQ9NRG9 546 aa15.94■□□□□ 0.14
U2AF1-210ENST00000478282 TRIM33Q9UPN9 1127 aa15.94■□□□□ 0.14
U2AF1-210ENST00000478282 WFS1O76024 890 aa15.94■□□□□ 0.14
U2AF1-210ENST00000478282 CCNB1P14635 433 aa15.94■□□□□ 0.14
U2AF1-210ENST00000478282 CALRP27797 417 aaKnown RBP15.94■□□□□ 0.14
U2AF1-210ENST00000478282 KCNJ1P48048 391 aa15.94■□□□□ 0.14
U2AF1-210ENST00000478282 GPC5P78333 572 aa15.94■□□□□ 0.14
U2AF1-210ENST00000478282 MKRN3Q13064 507 aaKnown RBP15.94■□□□□ 0.14
U2AF1-210ENST00000478282 MESDQ14696 234 aa15.94■□□□□ 0.14
U2AF1-210ENST00000478282 SIX1Q15475 284 aaPredicted RBP15.94■□□□□ 0.14
U2AF1-210ENST00000478282 PHLDB3Q6NSJ2 640 aa15.94■□□□□ 0.14
U2AF1-210ENST00000478282 C12orf50Q8NA57 414 aaPredicted RBP15.94■□□□□ 0.14
U2AF1-210ENST00000478282 RMDN2Q96LZ7 410 aa15.94■□□□□ 0.14
U2AF1-210ENST00000478282 TRIM7Q9C029 511 aa15.94■□□□□ 0.14
U2AF1-210ENST00000478282 MLXIPLQ9NP71 852 aa15.94■□□□□ 0.14
U2AF1-210ENST00000478282 KCNK9Q9NPC2 374 aa15.94■□□□□ 0.14
U2AF1-210ENST00000478282 MEIS2O14770 477 aa15.94■□□□□ 0.14
U2AF1-210ENST00000478282 FAM13AO94988 1023 aa15.94■□□□□ 0.14
U2AF1-210ENST00000478282 RFX1P22670 979 aa15.94■□□□□ 0.14
U2AF1-210ENST00000478282 PICALMQ13492 652 aa15.94■□□□□ 0.14
U2AF1-210ENST00000478282 COG2Q14746 738 aa15.94■□□□□ 0.14
U2AF1-210ENST00000478282 ZC2HC1CQ53FD0 456 aaPredicted RBP15.94■□□□□ 0.14
U2AF1-210ENST00000478282 RINT1Q6NUQ1 792 aa15.94■□□□□ 0.14
U2AF1-210ENST00000478282 MIS18BP1Q6P0N0 1132 aa15.94■□□□□ 0.14
U2AF1-210ENST00000478282 MIGA2Q7L4E1 593 aa15.94■□□□□ 0.14
U2AF1-210ENST00000478282 MORC4Q8TE76 937 aa15.94■□□□□ 0.14
U2AF1-210ENST00000478282 CD101Q93033 1021 aa15.94■□□□□ 0.14
U2AF1-210ENST00000478282 YDJCA8MPS7 323 aa15.93■□□□□ 0.14
U2AF1-210ENST00000478282 ECEL1O95672 775 aa15.93■□□□□ 0.14
U2AF1-210ENST00000478282 CDC25CP30307 473 aa15.93■□□□□ 0.14
U2AF1-210ENST00000478282 PRELPP51888 382 aa15.93■□□□□ 0.14
U2AF1-210ENST00000478282 MKRN4PQ13434 485 aaPredicted RBP15.93■□□□□ 0.14
U2AF1-210ENST00000478282 RNF43Q68DV7 783 aa15.93■□□□□ 0.14
U2AF1-210ENST00000478282 GDAP1Q8TB36 358 aa15.93■□□□□ 0.14
U2AF1-210ENST00000478282 MICAL1Q8TDZ2 1067 aa15.93■□□□□ 0.14
U2AF1-210ENST00000478282 FAM20AQ96MK3 541 aa15.93■□□□□ 0.14
U2AF1-210ENST00000478282 WHRNQ9P202 907 aa15.93■□□□□ 0.14
U2AF1-210ENST00000478282 CORO1CQ9ULV4 474 aaPredicted RBP15.93■□□□□ 0.14
U2AF1-210ENST00000478282 FRMD4BQ9Y2L6 1034 aa15.93■□□□□ 0.14
U2AF1-210ENST00000478282 RIMBP2O15034 1052 aa15.93■□□□□ 0.14
U2AF1-210ENST00000478282 BLMHQ13867 455 aa15.93■□□□□ 0.14
U2AF1-210ENST00000478282 AOC3Q16853 763 aa15.93■□□□□ 0.14
U2AF1-210ENST00000478282 MFSD14BQ5SR56 506 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms