RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 ECI2O75521 394 aa10.91□□□□□ -0.66
SMARCB1-206ENST00000477836 PSAPP07602 524 aa10.91□□□□□ -0.66
SMARCB1-206ENST00000477836 DRP2Q13474 957 aa10.91□□□□□ -0.66
SMARCB1-206ENST00000477836 GAS6Q14393 721 aa10.91□□□□□ -0.66
SMARCB1-206ENST00000477836 PPM1LQ5SGD2 360 aa10.91□□□□□ -0.66
SMARCB1-206ENST00000477836 LIN9Q5TKA1 542 aa10.91□□□□□ -0.66
SMARCB1-206ENST00000477836 RNF43Q68DV7 783 aa10.91□□□□□ -0.66
SMARCB1-206ENST00000477836 CATSPER4Q7RTX7 472 aa10.91□□□□□ -0.66
SMARCB1-206ENST00000477836 NPAS3Q8IXF0 933 aa10.91□□□□□ -0.66
SMARCB1-206ENST00000477836 COLGALT2Q8IYK4 626 aa10.91□□□□□ -0.66
SMARCB1-206ENST00000477836 CMTR1Q8N1G2 835 aaKnown RBP10.91□□□□□ -0.66
SMARCB1-206ENST00000477836 ING5Q8WYH8 240 aa10.91□□□□□ -0.66
SMARCB1-206ENST00000477836 FAM3CQ92520 227 aa10.91□□□□□ -0.66
SMARCB1-206ENST00000477836 DNASE1L2Q92874 299 aa10.91□□□□□ -0.66
SMARCB1-206ENST00000477836 MCRS1Q96EZ8 462 aa10.91□□□□□ -0.66
SMARCB1-206ENST00000477836 FDXACB1Q9BRP7 624 aaPredicted RBP10.91□□□□□ -0.66
SMARCB1-206ENST00000477836 SMOC1Q9H4F8 434 aa10.91□□□□□ -0.66
SMARCB1-206ENST00000477836 FNIP2Q9P278 1114 aa10.91□□□□□ -0.66
SMARCB1-206ENST00000477836 TCEAL9Q9UHQ7 104 aa10.91□□□□□ -0.66
SMARCB1-206ENST00000477836 CNTNAP2Q9UHC6 1331 aa10.9□□□□□ -0.66
SMARCB1-206ENST00000477836 XYLBO75191 536 aa10.9□□□□□ -0.66
SMARCB1-206ENST00000477836 PLEKHA8P1O95397 391 aa10.9□□□□□ -0.66
SMARCB1-206ENST00000477836 C8AP07357 584 aa10.9□□□□□ -0.66
SMARCB1-206ENST00000477836 HNRNPA1P09651 372 aaKnown RBP eCLIP10.9□□□□□ -0.66
SMARCB1-206ENST00000477836 SMARCA1P28370 1054 aa10.9□□□□□ -0.66
SMARCB1-206ENST00000477836 ANP32AP39687 249 aaKnown RBP10.9□□□□□ -0.66
SMARCB1-206ENST00000477836 GRM2Q14416 872 aa10.9□□□□□ -0.66
SMARCB1-206ENST00000477836 SART3Q15020 963 aaKnown RBP10.9□□□□□ -0.66
SMARCB1-206ENST00000477836 USP41Q3LFD5 358 aa10.9□□□□□ -0.66
SMARCB1-206ENST00000477836 TANGO2Q6ICL3 276 aa10.9□□□□□ -0.66
SMARCB1-206ENST00000477836 SRBD1Q8N5C6 995 aaKnown RBP10.9□□□□□ -0.66
SMARCB1-206ENST00000477836 FAM167AQ96KS9 214 aa10.9□□□□□ -0.66
SMARCB1-206ENST00000477836 MBOAT7Q96N66 472 aa10.9□□□□□ -0.66
SMARCB1-206ENST00000477836 GPR62Q9BZJ7 368 aa10.9□□□□□ -0.66
SMARCB1-206ENST00000477836 INO80BQ9C086 356 aaPredicted RBP10.9□□□□□ -0.66
SMARCB1-206ENST00000477836 BRD9Q9H8M2 597 aa10.9□□□□□ -0.66
SMARCB1-206ENST00000477836 NRBP2Q9NSY0 501 aa10.9□□□□□ -0.66
SMARCB1-206ENST00000477836 HCFC1R1Q9NWW0 138 aa10.9□□□□□ -0.66
SMARCB1-206ENST00000477836 FBXW11Q9UKB1 542 aa10.9□□□□□ -0.66
SMARCB1-206ENST00000477836 RBM19Q9Y4C8 960 aaKnown RBP10.9□□□□□ -0.66
SMARCB1-206ENST00000477836 SAMM50Q9Y512 469 aa10.9□□□□□ -0.66
SMARCB1-206ENST00000477836 IGSF10Q6WRI0 2623 aa10.89□□□□□ -0.67
SMARCB1-206ENST00000477836 K7ESF4 209 aa10.89□□□□□ -0.67
SMARCB1-206ENST00000477836 IPO5O00410 1097 aaKnown RBP10.89□□□□□ -0.67
SMARCB1-206ENST00000477836 EPN2O95208 641 aa10.89□□□□□ -0.67
SMARCB1-206ENST00000477836 OATP04181 439 aa10.89□□□□□ -0.67
SMARCB1-206ENST00000477836 CHRNB1P11230 501 aa10.89□□□□□ -0.67
SMARCB1-206ENST00000477836 CDC42EP1Q00587 391 aa10.89□□□□□ -0.67
SMARCB1-206ENST00000477836 CREMQ03060 361 aa10.89□□□□□ -0.67
SMARCB1-206ENST00000477836 PABPC1LQ4VXU2 614 aaKnown RBP10.89□□□□□ -0.67
SMARCB1-206ENST00000477836 SH3PXD2AQ5TCZ1 1133 aa10.89□□□□□ -0.67
SMARCB1-206ENST00000477836 ZNF746Q6NUN9 644 aaPredicted RBP10.89□□□□□ -0.67
SMARCB1-206ENST00000477836 FUT10Q6P4F1 479 aa10.89□□□□□ -0.67
SMARCB1-206ENST00000477836 PRSS55Q6UWB4 352 aaPredicted RBP10.89□□□□□ -0.67
SMARCB1-206ENST00000477836 HEATR3Q7Z4Q2 680 aa10.89□□□□□ -0.67
SMARCB1-206ENST00000477836 MRPL10Q7Z7H8 261 aaKnown RBP10.89□□□□□ -0.67
SMARCB1-206ENST00000477836 PLA2G4DQ86XP0 818 aa10.89□□□□□ -0.67
SMARCB1-206ENST00000477836 SMAP1Q8IYB5 467 aaPredicted RBP10.89□□□□□ -0.67
SMARCB1-206ENST00000477836 SPEM1Q8N4L4 309 aa10.89□□□□□ -0.67
SMARCB1-206ENST00000477836 LOXL4Q96JB6 756 aa10.89□□□□□ -0.67
SMARCB1-206ENST00000477836 LZTS2Q9BRK4 669 aa10.89□□□□□ -0.67
SMARCB1-206ENST00000477836 ANO3Q9BYT9 981 aa10.89□□□□□ -0.67
SMARCB1-206ENST00000477836 LSG1Q9H089 658 aaKnown RBP10.89□□□□□ -0.67
SMARCB1-206ENST00000477836 PCDHA10Q9Y5I2 948 aa10.89□□□□□ -0.67
SMARCB1-206ENST00000477836 MAST4O15021 2626 aa10.88□□□□□ -0.67
SMARCB1-206ENST00000477836 ADAMTS20P59510 1910 aa10.88□□□□□ -0.67
SMARCB1-206ENST00000477836 NR1I2O75469 434 aa10.88□□□□□ -0.67
SMARCB1-206ENST00000477836 HOXC13P31276 330 aa10.88□□□□□ -0.67
SMARCB1-206ENST00000477836 PLA2G2CQ5R387 149 aa10.88□□□□□ -0.67
SMARCB1-206ENST00000477836 TCEAL6Q6IPX3 200 aa10.88□□□□□ -0.67
SMARCB1-206ENST00000477836 C19orf48Q6RUI8 117 aa10.88□□□□□ -0.67
SMARCB1-206ENST00000477836 NIPA1Q7RTP0 329 aa10.88□□□□□ -0.67
SMARCB1-206ENST00000477836 RHPN2Q8IUC4 686 aa10.88□□□□□ -0.67
SMARCB1-206ENST00000477836 ZNF654Q8IZM8 581 aa10.88□□□□□ -0.67
SMARCB1-206ENST00000477836 CCDC82Q8N4S0 544 aa10.88□□□□□ -0.67
SMARCB1-206ENST00000477836 TCEAL3Q969E4 200 aa10.88□□□□□ -0.67
SMARCB1-206ENST00000477836 ELSPBP1Q96BH3 223 aa10.88□□□□□ -0.67
SMARCB1-206ENST00000477836 MAP3K14Q99558 947 aa10.88□□□□□ -0.67
SMARCB1-206ENST00000477836 ZNF577Q9BSK1 485 aa10.88□□□□□ -0.67
SMARCB1-206ENST00000477836 EDEM2Q9BV94 578 aa10.88□□□□□ -0.67
SMARCB1-206ENST00000477836 COLEC11Q9BWP8 271 aa10.88□□□□□ -0.67
SMARCB1-206ENST00000477836 AGPAT5Q9NUQ2 364 aa10.88□□□□□ -0.67
SMARCB1-206ENST00000477836 DNMT3BQ9UBC3 853 aaKnown RBP10.88□□□□□ -0.67
SMARCB1-206ENST00000477836 KCNH3Q9ULD8 1083 aa10.88□□□□□ -0.67
SMARCB1-206ENST00000477836 MRPS23Q9Y3D9 190 aaKnown RBP10.88□□□□□ -0.67
SMARCB1-206ENST00000477836 PIAS3Q9Y6X2 628 aa10.88□□□□□ -0.67
SMARCB1-206ENST00000477836 CELSR3Q9NYQ7 3312 aa10.88□□□□□ -0.67
SMARCB1-206ENST00000477836 SDK1Q7Z5N4 2213 aa10.88□□□□□ -0.67
SMARCB1-206ENST00000477836 NOTCH4Q99466 2003 aa10.87□□□□□ -0.67
SMARCB1-206ENST00000477836 C4orf47A7E2U8 309 aa10.87□□□□□ -0.67
SMARCB1-206ENST00000477836 FAM86B1E9PN63 330 aa10.87□□□□□ -0.67
SMARCB1-206ENST00000477836 ZNF862O60290 1169 aa10.87□□□□□ -0.67
SMARCB1-206ENST00000477836 DDAH1O94760 285 aa10.87□□□□□ -0.67
SMARCB1-206ENST00000477836 PAPSS2O95340 614 aaPredicted RBP10.87□□□□□ -0.67
SMARCB1-206ENST00000477836 FOSP01100 380 aaPredicted RBP10.87□□□□□ -0.67
SMARCB1-206ENST00000477836 FAM86B2P0C5J1 330 aa10.87□□□□□ -0.67
SMARCB1-206ENST00000477836 CCNE1P24864 410 aa10.87□□□□□ -0.67
SMARCB1-206ENST00000477836 HOXA9P31269 272 aa10.87□□□□□ -0.67
SMARCB1-206ENST00000477836 SREBF1P36956 1147 aa10.87□□□□□ -0.67
SMARCB1-206ENST00000477836 MPLP40238 635 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms