RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 FLOT1O75955 427 aa5.52□□□□□ -1.53
CKS1B-207ENST00000477676 SNAI1O95863 264 aaPredicted RBP5.52□□□□□ -1.53
CKS1B-207ENST00000477676 F13A1P00488 732 aa5.52□□□□□ -1.53
CKS1B-207ENST00000477676 CLTBP09497 229 aa5.52□□□□□ -1.53
CKS1B-207ENST00000477676 FOSL2P15408 326 aa5.52□□□□□ -1.53
CKS1B-207ENST00000477676 PTGS1P23219 599 aa5.52□□□□□ -1.53
CKS1B-207ENST00000477676 OS9Q13438 667 aaPredicted RBP5.52□□□□□ -1.53
CKS1B-207ENST00000477676 PLS1Q14651 629 aa5.52□□□□□ -1.53
CKS1B-207ENST00000477676 CEP85Q6P2H3 762 aa5.52□□□□□ -1.53
CKS1B-207ENST00000477676 SND1Q7KZF4 910 aaKnown RBP eCLIP5.52□□□□□ -1.53
CKS1B-207ENST00000477676 IGDCC3Q8IVU1 814 aa5.52□□□□□ -1.53
CKS1B-207ENST00000477676 ABRAQ8N0Z2 381 aa5.52□□□□□ -1.53
CKS1B-207ENST00000477676 KLHDC9Q8NEP7 349 aa5.52□□□□□ -1.53
CKS1B-207ENST00000477676 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.52□□□□□ -1.53
CKS1B-207ENST00000477676 TINF2Q9BSI4 451 aa5.52□□□□□ -1.53
CKS1B-207ENST00000477676 VCPKMTQ9H867 229 aa5.52□□□□□ -1.53
CKS1B-207ENST00000477676 ARMT1Q9H993 441 aa5.52□□□□□ -1.53
CKS1B-207ENST00000477676 IL1RAPL2Q9NP60 686 aa5.52□□□□□ -1.53
CKS1B-207ENST00000477676 CABP5Q9NP86 173 aa5.52□□□□□ -1.53
CKS1B-207ENST00000477676 XPNPEP3Q9NQH7 507 aa5.52□□□□□ -1.53
CKS1B-207ENST00000477676 MCM9Q9NXL9 1143 aa5.52□□□□□ -1.53
CKS1B-207ENST00000477676 VTI1BQ9UEU0 232 aa5.52□□□□□ -1.53
CKS1B-207ENST00000477676 TBX21Q9UL17 535 aa5.52□□□□□ -1.53
CKS1B-207ENST00000477676 ZNF214Q9UL59 606 aaPredicted RBP5.52□□□□□ -1.53
CKS1B-207ENST00000477676 TMX2Q9Y320 296 aa5.52□□□□□ -1.53
CKS1B-207ENST00000477676 RIPK3Q9Y572 518 aa5.52□□□□□ -1.53
CKS1B-207ENST00000477676 SCN10AQ9Y5Y9 1956 aa5.52□□□□□ -1.53
CKS1B-207ENST00000477676 MYH7BA7E2Y1 1941 aa5.52□□□□□ -1.53
CKS1B-207ENST00000477676 ROBO3Q96MS0 1386 aa5.52□□□□□ -1.53
CKS1B-207ENST00000477676 SYNRGQ9UMZ2 1314 aa5.51□□□□□ -1.53
CKS1B-207ENST00000477676 ATG2AQ2TAZ0 1938 aa5.51□□□□□ -1.53
CKS1B-207ENST00000477676 K7ESM1 405 aa5.51□□□□□ -1.53
CKS1B-207ENST00000477676 OVOL3O00110 214 aa5.51□□□□□ -1.53
CKS1B-207ENST00000477676 VWA5AO00534 786 aa5.51□□□□□ -1.53
CKS1B-207ENST00000477676 MPHOSPH10O00566 681 aaKnown RBP5.51□□□□□ -1.53
CKS1B-207ENST00000477676 RGS13O14921 159 aa5.51□□□□□ -1.53
CKS1B-207ENST00000477676 IPO8O15397 1037 aaKnown RBP5.51□□□□□ -1.53
CKS1B-207ENST00000477676 NRDCO43847 1150 aa5.51□□□□□ -1.53
CKS1B-207ENST00000477676 IGSF3O75054 1194 aa5.51□□□□□ -1.53
CKS1B-207ENST00000477676 FCER1AP12319 257 aa5.51□□□□□ -1.53
CKS1B-207ENST00000477676 EEF2P13639 858 aaKnown RBP5.51□□□□□ -1.53
CKS1B-207ENST00000477676 TNFRSF1AP19438 455 aa5.51□□□□□ -1.53
CKS1B-207ENST00000477676 CDK7P50613 346 aa5.51□□□□□ -1.53
CKS1B-207ENST00000477676 MAP3K12Q12852 859 aa5.51□□□□□ -1.53
CKS1B-207ENST00000477676 TMEM240Q5SV17 173 aa5.51□□□□□ -1.53
CKS1B-207ENST00000477676 ZFYVE27Q5T4F4 411 aa5.51□□□□□ -1.53
CKS1B-207ENST00000477676 SLC9C2Q5TAH2 1124 aa5.51□□□□□ -1.53
CKS1B-207ENST00000477676 C12orf60Q5U649 245 aa5.51□□□□□ -1.53
CKS1B-207ENST00000477676 CEP128Q6ZU80 1094 aa5.51□□□□□ -1.53
CKS1B-207ENST00000477676 TMEM179Q6ZVK1 233 aa5.51□□□□□ -1.53
CKS1B-207ENST00000477676 ANKRD33Q7Z3H0 272 aa5.51□□□□□ -1.53
CKS1B-207ENST00000477676 AACSQ86V21 672 aa5.51□□□□□ -1.53
CKS1B-207ENST00000477676 RIOX2Q8IUF8 465 aa5.51□□□□□ -1.53
CKS1B-207ENST00000477676 MB21D1Q8N884 522 aa5.51□□□□□ -1.53
CKS1B-207ENST00000477676 GOLM1Q8NBJ4 401 aa5.51□□□□□ -1.53
CKS1B-207ENST00000477676 RNPC3Q96LT9 517 aaKnown RBP5.51□□□□□ -1.53
CKS1B-207ENST00000477676 NUP88Q99567 741 aaPredicted RBP5.51□□□□□ -1.53
CKS1B-207ENST00000477676 KIF2CQ99661 725 aa5.51□□□□□ -1.53
CKS1B-207ENST00000477676 KATNBL1Q9H079 304 aa5.51□□□□□ -1.53
CKS1B-207ENST00000477676 MROH8Q9H579 483 aa5.51□□□□□ -1.53
CKS1B-207ENST00000477676 TCFL5Q9UL49 500 aa5.51□□□□□ -1.53
CKS1B-207ENST00000477676 DDX49Q9Y6V7 483 aaKnown RBP5.51□□□□□ -1.53
CKS1B-207ENST00000477676 MYO15AQ9UKN7 3530 aa5.51□□□□□ -1.53
CKS1B-207ENST00000477676 ASTN1O14525 1302 aa5.5□□□□□ -1.53
CKS1B-207ENST00000477676 ZBED9Q6R2W3 1325 aa5.5□□□□□ -1.53
CKS1B-207ENST00000477676 MYH6P13533 1939 aa5.5□□□□□ -1.53
CKS1B-207ENST00000477676 COL4A4P53420 1690 aaPredicted RBP5.5□□□□□ -1.53
CKS1B-207ENST00000477676 TANC1Q9C0D5 1861 aa5.5□□□□□ -1.53
CKS1B-207ENST00000477676 CHURC1-FNTBB4DL54 471 aa5.5□□□□□ -1.53
CKS1B-207ENST00000477676 GOLIM4O00461 696 aa5.5□□□□□ -1.53
CKS1B-207ENST00000477676 WDR46O15213 610 aaKnown RBP5.5□□□□□ -1.53
CKS1B-207ENST00000477676 MBD4O95243 580 aa5.5□□□□□ -1.53
CKS1B-207ENST00000477676 TIMP1P01033 207 aa5.5□□□□□ -1.53
CKS1B-207ENST00000477676 MPOP05164 745 aa5.5□□□□□ -1.53
CKS1B-207ENST00000477676 ACRP10323 421 aa5.5□□□□□ -1.53
CKS1B-207ENST00000477676 RARBP10826 455 aa5.5□□□□□ -1.53
CKS1B-207ENST00000477676 ADD2P35612 726 aa5.5□□□□□ -1.53
CKS1B-207ENST00000477676 STAT3P40763 770 aa5.5□□□□□ -1.53
CKS1B-207ENST00000477676 KCNC1P48547 511 aa5.5□□□□□ -1.53
CKS1B-207ENST00000477676 ACLYP53396 1101 aa5.5□□□□□ -1.53
CKS1B-207ENST00000477676 ICA1Q05084 483 aa5.5□□□□□ -1.53
CKS1B-207ENST00000477676 FAM83BQ5T0W9 1011 aa5.5□□□□□ -1.53
CKS1B-207ENST00000477676 TMEM63BQ5T3F8 832 aa5.5□□□□□ -1.53
CKS1B-207ENST00000477676 ZKSCAN2Q63HK3 967 aa5.5□□□□□ -1.53
CKS1B-207ENST00000477676 GALNT18Q6P9A2 607 aa5.5□□□□□ -1.53
CKS1B-207ENST00000477676 C16orf86Q6ZW13 317 aa5.5□□□□□ -1.53
CKS1B-207ENST00000477676 REC114Q7Z4M0 266 aa5.5□□□□□ -1.53
CKS1B-207ENST00000477676 CERS3Q8IU89 383 aa5.5□□□□□ -1.53
CKS1B-207ENST00000477676 MMP19Q99542 508 aa5.5□□□□□ -1.53
CKS1B-207ENST00000477676 CRNKL1Q9BZJ0 848 aaKnown RBP5.5□□□□□ -1.53
CKS1B-207ENST00000477676 GZF1Q9H116 711 aaPredicted RBP5.5□□□□□ -1.53
CKS1B-207ENST00000477676 PRDM12Q9H4Q4 367 aa5.5□□□□□ -1.53
CKS1B-207ENST00000477676 TNFRSF10DQ9UBN6 386 aa5.5□□□□□ -1.53
CKS1B-207ENST00000477676 NRBP1Q9UHY1 535 aa5.5□□□□□ -1.53
CKS1B-207ENST00000477676 CNOT11Q9UKZ1 510 aaKnown RBP5.5□□□□□ -1.53
CKS1B-207ENST00000477676 KIAA1217Q5T5P2 1943 aa5.5□□□□□ -1.53
CKS1B-207ENST00000477676 GRIN2DO15399 1336 aa5.49□□□□□ -1.53
CKS1B-207ENST00000477676 UMODL1Q5DID0 1318 aa5.49□□□□□ -1.53
CKS1B-207ENST00000477676 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.49□□□□□ -1.53
CKS1B-207ENST00000477676 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms