RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 MCF2P10911 925 aa17.68■□□□□ 0.42
VHL-203ENST00000477538 NR2F2P24468 414 aa17.68■□□□□ 0.42
VHL-203ENST00000477538 RPL13P26373 211 aaKnown RBP17.68■□□□□ 0.42
VHL-203ENST00000477538 CYP2J2P51589 502 aa17.68■□□□□ 0.42
VHL-203ENST00000477538 MCL1Q07820 350 aa17.68■□□□□ 0.42
VHL-203ENST00000477538 DCAF4L1Q3SXM0 396 aa17.68■□□□□ 0.42
VHL-203ENST00000477538 CNKSR3Q6P9H4 555 aa17.68■□□□□ 0.42
VHL-203ENST00000477538 FAM43BQ6ZT52 329 aaPredicted RBP17.68■□□□□ 0.42
VHL-203ENST00000477538 SLC9A9Q8IVB4 645 aa17.68■□□□□ 0.42
VHL-203ENST00000477538 RPUSD2Q8IZ73 545 aaKnown RBP17.68■□□□□ 0.42
VHL-203ENST00000477538 DUSP9Q99956 384 aaKnown RBP17.68■□□□□ 0.42
VHL-203ENST00000477538 ADAM2Q99965 735 aa17.68■□□□□ 0.42
VHL-203ENST00000477538 BPIFA3Q9BQP9 254 aa17.68■□□□□ 0.42
VHL-203ENST00000477538 EIF2AQ9BY44 585 aaKnown RBP17.68■□□□□ 0.42
VHL-203ENST00000477538 HSPBP1Q9NZL4 362 aa17.68■□□□□ 0.42
VHL-203ENST00000477538 NR2E3Q9Y5X4 410 aa17.68■□□□□ 0.42
VHL-203ENST00000477538 KIAA0391O15091 583 aaKnown RBP17.67■□□□□ 0.42
VHL-203ENST00000477538 PFKMP08237 780 aa17.67■□□□□ 0.42
VHL-203ENST00000477538 FPGSQ05932 587 aa17.67■□□□□ 0.42
VHL-203ENST00000477538 PPIGQ13427 754 aaKnown RBP eCLIP17.67■□□□□ 0.42
VHL-203ENST00000477538 MYBPC2Q14324 1141 aa17.67■□□□□ 0.42
VHL-203ENST00000477538 TPD52L1Q16890 204 aaPredicted RBP17.67■□□□□ 0.42
VHL-203ENST00000477538 TCTN1Q2MV58 587 aa17.67■□□□□ 0.42
VHL-203ENST00000477538 UBXN11Q5T124 520 aa17.67■□□□□ 0.42
VHL-203ENST00000477538 CSGALNACT2Q8N6G5 542 aa17.67■□□□□ 0.42
VHL-203ENST00000477538 AOPEPQ8N6M6 819 aa17.67■□□□□ 0.42
VHL-203ENST00000477538 ENOX1Q8TC92 643 aaKnown RBP17.67■□□□□ 0.42
VHL-203ENST00000477538 VWCEQ96DN2 955 aa17.67■□□□□ 0.42
VHL-203ENST00000477538 SAAL1Q96ER3 474 aa17.67■□□□□ 0.42
VHL-203ENST00000477538 TRIM6Q9C030 488 aaPredicted RBP17.67■□□□□ 0.42
VHL-203ENST00000477538 IL23AQ9NPF7 189 aa17.67■□□□□ 0.42
VHL-203ENST00000477538 DMAC2Q9NW81 257 aa17.67■□□□□ 0.42
VHL-203ENST00000477538 AGO2Q9UKV8 859 aaKnown RBP17.67■□□□□ 0.42
VHL-203ENST00000477538 OGTO15294 1046 aa17.66■□□□□ 0.42
VHL-203ENST00000477538 FKBP3Q00688 224 aaKnown RBP17.66■□□□□ 0.42
VHL-203ENST00000477538 MYL5Q02045 173 aa17.66■□□□□ 0.42
VHL-203ENST00000477538 ADAM9Q13443 819 aa17.66■□□□□ 0.42
VHL-203ENST00000477538 LRRC55Q6ZSA7 311 aa17.66■□□□□ 0.42
VHL-203ENST00000477538 ZC3H3Q8IXZ2 948 aaKnown RBP17.66■□□□□ 0.42
VHL-203ENST00000477538 GPD1LQ8N335 351 aa17.66■□□□□ 0.42
VHL-203ENST00000477538 XXYLT1Q8NBI6 393 aa17.66■□□□□ 0.42
VHL-203ENST00000477538 NOC3LQ8WTT2 800 aaKnown RBP17.66■□□□□ 0.42
VHL-203ENST00000477538 TMEM174Q8WUU8 243 aa17.66■□□□□ 0.42
VHL-203ENST00000477538 LINC01599Q8WXQ3 324 aa17.66■□□□□ 0.42
VHL-203ENST00000477538 TSPYL2Q9H2G4 693 aaPredicted RBP17.66■□□□□ 0.42
VHL-203ENST00000477538 RGS18Q9NS28 235 aa17.66■□□□□ 0.42
VHL-203ENST00000477538 FAM105AQ9NUU6 356 aa17.66■□□□□ 0.42
VHL-203ENST00000477538 GBF1Q92538 1859 aa17.66■□□□□ 0.42
VHL-203ENST00000477538 GOLGA8IPA6NC78 632 aa17.65■□□□□ 0.42
VHL-203ENST00000477538 GOLGA8JA6NMD2 632 aa17.65■□□□□ 0.42
VHL-203ENST00000477538 CETN3O15182 167 aa17.65■□□□□ 0.42
VHL-203ENST00000477538 EXOC3O60645 756 aa17.65■□□□□ 0.42
VHL-203ENST00000477538 LDHAP00338 332 aaKnown RBP17.65■□□□□ 0.42
VHL-203ENST00000477538 ACRP10323 421 aa17.65■□□□□ 0.42
VHL-203ENST00000477538 RAB27AP51159 221 aa17.65■□□□□ 0.42
VHL-203ENST00000477538 SPATA1Q5VX52 437 aa17.65■□□□□ 0.42
VHL-203ENST00000477538 CEP135Q66GS9 1140 aa17.65■□□□□ 0.42
VHL-203ENST00000477538 RTN4RL1Q86UN2 441 aaPredicted RBP17.65■□□□□ 0.42
VHL-203ENST00000477538 DHX40Q8IX18 779 aaKnown RBP17.65■□□□□ 0.42
VHL-203ENST00000477538 THNSL1Q8IYQ7 743 aa17.65■□□□□ 0.42
VHL-203ENST00000477538 CEP120Q8N960 986 aa17.65■□□□□ 0.42
VHL-203ENST00000477538 ZSWIM2Q8NEG5 633 aa17.65■□□□□ 0.42
VHL-203ENST00000477538 FAM200AQ8TCP9 573 aa17.65■□□□□ 0.42
VHL-203ENST00000477538 EEF2KMTQ96G04 330 aa17.65■□□□□ 0.42
VHL-203ENST00000477538 CEP63Q96MT8 703 aa17.65■□□□□ 0.42
VHL-203ENST00000477538 LBHD1Q9BQE6 289 aaPredicted RBP17.65■□□□□ 0.42
VHL-203ENST00000477538 TRAIPQ9BWF2 469 aa17.65■□□□□ 0.42
VHL-203ENST00000477538 SRRTQ9BXP5 876 aaKnown RBP17.65■□□□□ 0.42
VHL-203ENST00000477538 CBX8Q9HC52 389 aa17.65■□□□□ 0.42
VHL-203ENST00000477538 C1orf112Q9NSG2 853 aa17.65■□□□□ 0.42
VHL-203ENST00000477538 NFE2L3Q9Y4A8 694 aa17.65■□□□□ 0.42
VHL-203ENST00000477538 PCDHB2Q9Y5E7 798 aa17.65■□□□□ 0.42
VHL-203ENST00000477538 SMTNL1A8MU46 457 aa17.64■□□□□ 0.41
VHL-203ENST00000477538 BECN2A8MW95 431 aa17.64■□□□□ 0.41
VHL-203ENST00000477538 C9IYK1 514 aa17.64■□□□□ 0.41
VHL-203ENST00000477538 IKBKBO14920 756 aa17.64■□□□□ 0.41
VHL-203ENST00000477538 EXTL3O43909 919 aa17.64■□□□□ 0.41
VHL-203ENST00000477538 FAM189A1O60320 539 aa17.64■□□□□ 0.41
VHL-203ENST00000477538 FGFR1OPO95684 399 aaKnown RBP17.64■□□□□ 0.41
VHL-203ENST00000477538 SKIP12755 728 aa17.64■□□□□ 0.41
VHL-203ENST00000477538 CASP4P49662 377 aa17.64■□□□□ 0.41
VHL-203ENST00000477538 ACOT2P49753 483 aa17.64■□□□□ 0.41
VHL-203ENST00000477538 OSTNP61366 133 aa17.64■□□□□ 0.41
VHL-203ENST00000477538 IKBKEQ14164 716 aa17.64■□□□□ 0.41
VHL-203ENST00000477538 HSP90AA2PQ14568 343 aaPredicted RBP17.64■□□□□ 0.41
VHL-203ENST00000477538 IQCB1Q15051 598 aa17.64■□□□□ 0.41
VHL-203ENST00000477538 KYAT1Q16773 422 aa17.64■□□□□ 0.41
VHL-203ENST00000477538 SEZ6Q53EL9 994 aa17.64■□□□□ 0.41
VHL-203ENST00000477538 ZBTB41Q5SVQ8 909 aa17.64■□□□□ 0.41
VHL-203ENST00000477538 SLC24A5Q71RS6 500 aa17.64■□□□□ 0.41
VHL-203ENST00000477538 FAM213AQ9BRX8 229 aa17.64■□□□□ 0.41
VHL-203ENST00000477538 NXF3Q9H4D5 531 aaKnown RBP17.64■□□□□ 0.41
VHL-203ENST00000477538 KIAA1586Q9HCI6 787 aa17.64■□□□□ 0.41
VHL-203ENST00000477538 FRMD4BQ9Y2L6 1034 aa17.64■□□□□ 0.41
VHL-203ENST00000477538 IPPQ9Y573 584 aa17.64■□□□□ 0.41
VHL-203ENST00000477538 A0A0U1RQF3 1178 aa17.63■□□□□ 0.41
VHL-203ENST00000477538 ENPP3O14638 875 aa17.63■□□□□ 0.41
VHL-203ENST00000477538 STAG3L1P0CL83 205 aa17.63■□□□□ 0.41
VHL-203ENST00000477538 ACTN1P12814 892 aa17.63■□□□□ 0.41
VHL-203ENST00000477538 IBSPP21815 317 aaPredicted RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms