RNA–Protein interactions for RNA: ENST00000477487.5

TNRC6A-206, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 1 (best)

Gene TNRC6A, Length 2,740 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-206ENST00000477487 ZNF784Q8NCA9 323 aaPredicted RBP12.85□□□□□ -0.35
TNRC6A-206ENST00000477487 PARD3BQ8TEW8 1205 aa12.85□□□□□ -0.35
TNRC6A-206ENST00000477487 FAM167AQ96KS9 214 aa12.85□□□□□ -0.35
TNRC6A-206ENST00000477487 APBA2Q99767 749 aa12.85□□□□□ -0.35
TNRC6A-206ENST00000477487 MKNK1Q9BUB5 465 aa12.85□□□□□ -0.35
TNRC6A-206ENST00000477487 INO80BQ9C086 356 aaPredicted RBP12.85□□□□□ -0.35
TNRC6A-206ENST00000477487 INTS2Q9H0H0 1204 aaKnown RBP12.85□□□□□ -0.35
TNRC6A-206ENST00000477487 CCDC113Q9H0I3 377 aa12.85□□□□□ -0.35
TNRC6A-206ENST00000477487 CXCL16Q9H2A7 254 aa12.85□□□□□ -0.35
TNRC6A-206ENST00000477487 C17orf75Q9HAS0 396 aa12.85□□□□□ -0.35
TNRC6A-206ENST00000477487 AKT3Q9Y243 479 aa12.85□□□□□ -0.35
TNRC6A-206ENST00000477487 A0A1W2PQJ5 194 aa12.85□□□□□ -0.35
TNRC6A-206ENST00000477487 RGS2P41220 211 aa12.85□□□□□ -0.35
TNRC6A-206ENST00000477487 INHBEP58166 350 aa12.85□□□□□ -0.35
TNRC6A-206ENST00000477487 ALCAMQ13740 583 aa12.85□□□□□ -0.35
TNRC6A-206ENST00000477487 NAA30Q147X3 362 aaPredicted RBP12.85□□□□□ -0.35
TNRC6A-206ENST00000477487 GRIK4Q16099 956 aa12.85□□□□□ -0.35
TNRC6A-206ENST00000477487 MTHFD1LQ6UB35 978 aa12.85□□□□□ -0.35
TNRC6A-206ENST00000477487 GBP6Q6ZN66 633 aa12.85□□□□□ -0.35
TNRC6A-206ENST00000477487 C12orf56Q8IXR9 622 aa12.85□□□□□ -0.35
TNRC6A-206ENST00000477487 TAS1R2Q8TE23 839 aa12.85□□□□□ -0.35
TNRC6A-206ENST00000477487 LMBR1Q8WVP7 490 aa12.85□□□□□ -0.35
TNRC6A-206ENST00000477487 EMID1Q96A84 441 aaPredicted RBP12.85□□□□□ -0.35
TNRC6A-206ENST00000477487 CCDC51Q96ER9 411 aa12.85□□□□□ -0.35
TNRC6A-206ENST00000477487 CCDC97Q96F63 343 aaPredicted RBP12.85□□□□□ -0.35
TNRC6A-206ENST00000477487 NUP58Q9BVL2 599 aa12.85□□□□□ -0.35
TNRC6A-206ENST00000477487 GPR88Q9GZN0 384 aa12.85□□□□□ -0.35
TNRC6A-206ENST00000477487 CEP72Q9P209 647 aa12.85□□□□□ -0.35
TNRC6A-206ENST00000477487 DNAI1Q9UI46 699 aa12.85□□□□□ -0.35
TNRC6A-206ENST00000477487 MYL3P08590 195 aa12.84□□□□□ -0.35
TNRC6A-206ENST00000477487 CYP24A1Q07973 514 aa12.84□□□□□ -0.35
TNRC6A-206ENST00000477487 STRN3Q13033 797 aa12.84□□□□□ -0.35
TNRC6A-206ENST00000477487 PPFIA1Q13136 1202 aa12.84□□□□□ -0.35
TNRC6A-206ENST00000477487 KIZQ2M2Z5 673 aa12.84□□□□□ -0.35
TNRC6A-206ENST00000477487 IER5Q5VY09 327 aa12.84□□□□□ -0.35
TNRC6A-206ENST00000477487 POM121Q96HA1 1249 aa12.84□□□□□ -0.35
TNRC6A-206ENST00000477487 PAXBP1Q9Y5B6 917 aa12.84□□□□□ -0.35
TNRC6A-206ENST00000477487 MEFVO15553 781 aaPredicted RBP12.84□□□□□ -0.35
TNRC6A-206ENST00000477487 GFPT2O94808 682 aa12.84□□□□□ -0.35
TNRC6A-206ENST00000477487 PRKCBP05771 671 aa12.84□□□□□ -0.35
TNRC6A-206ENST00000477487 CCND3P30281 292 aaPredicted RBP12.84□□□□□ -0.35
TNRC6A-206ENST00000477487 DGKDQ16760 1214 aa12.84□□□□□ -0.35
TNRC6A-206ENST00000477487 TDRD12Q587J7 1177 aaKnown RBP12.84□□□□□ -0.35
TNRC6A-206ENST00000477487 BRDTQ58F21 947 aaPredicted RBP12.84□□□□□ -0.35
TNRC6A-206ENST00000477487 SPOPLQ6IQ16 392 aa12.84□□□□□ -0.35
TNRC6A-206ENST00000477487 LINC01465Q8N7H1 131 aa12.84□□□□□ -0.35
TNRC6A-206ENST00000477487 OR5B17Q8NGF7 314 aa12.84□□□□□ -0.35
TNRC6A-206ENST00000477487 GOLGA5Q8TBA6 731 aa12.84□□□□□ -0.35
TNRC6A-206ENST00000477487 FAM212AQ96EL1 285 aa12.84□□□□□ -0.35
TNRC6A-206ENST00000477487 KCND1Q9NSA2 647 aa12.84□□□□□ -0.35
TNRC6A-206ENST00000477487 AGO2Q9UKV8 859 aaKnown RBP12.84□□□□□ -0.35
TNRC6A-206ENST00000477487 CARNS1A5YM72 827 aa12.83□□□□□ -0.35
TNRC6A-206ENST00000477487 ABLIM1O14639 778 aa12.83□□□□□ -0.35
TNRC6A-206ENST00000477487 KRT13P13646 458 aa12.83□□□□□ -0.35
TNRC6A-206ENST00000477487 IRF2BP2Q7Z5L9 587 aa12.83□□□□□ -0.35
TNRC6A-206ENST00000477487 THNSL1Q8IYQ7 743 aa12.83□□□□□ -0.35
TNRC6A-206ENST00000477487 KIAA0319LQ8IZA0 1049 aa12.83□□□□□ -0.35
TNRC6A-206ENST00000477487 GPD1LQ8N335 351 aa12.83□□□□□ -0.35
TNRC6A-206ENST00000477487 CD99L2Q8TCZ2 262 aa12.83□□□□□ -0.35
TNRC6A-206ENST00000477487 DHX38Q92620 1227 aaKnown RBP12.83□□□□□ -0.35
TNRC6A-206ENST00000477487 TATDN2Q93075 761 aa12.83□□□□□ -0.35
TNRC6A-206ENST00000477487 FBXL18Q96ME1 805 aa12.83□□□□□ -0.35
TNRC6A-206ENST00000477487 MSTO1Q9BUK6 570 aa12.83□□□□□ -0.35
TNRC6A-206ENST00000477487 PACSIN1Q9BY11 444 aa12.83□□□□□ -0.35
TNRC6A-206ENST00000477487 ZCCHC17Q9NP64 241 aaKnown RBP12.83□□□□□ -0.35
TNRC6A-206ENST00000477487 SALL4Q9UJQ4 1053 aa12.83□□□□□ -0.35
TNRC6A-206ENST00000477487 DNAJC12Q9UKB3 198 aa12.83□□□□□ -0.35
TNRC6A-206ENST00000477487 EXOC7Q9UPT5 735 aa12.83□□□□□ -0.35
TNRC6A-206ENST00000477487 FAM189A1O60320 539 aa12.83□□□□□ -0.36
TNRC6A-206ENST00000477487 CCDC175P0C221 793 aa12.83□□□□□ -0.36
TNRC6A-206ENST00000477487 SMIM10L2AP0DMW4 78 aa12.83□□□□□ -0.36
TNRC6A-206ENST00000477487 SMIM10L2BP0DMW5 78 aa12.83□□□□□ -0.36
TNRC6A-206ENST00000477487 GTF2F1P35269 517 aaKnown RBP eCLIP12.83□□□□□ -0.36
TNRC6A-206ENST00000477487 KCNJ6P48051 423 aa12.83□□□□□ -0.36
TNRC6A-206ENST00000477487 MBTD1Q05BQ5 628 aa12.83□□□□□ -0.36
TNRC6A-206ENST00000477487 OLIG1Q8TAK6 271 aa12.83□□□□□ -0.36
TNRC6A-206ENST00000477487 TCHPQ9BT92 498 aa12.83□□□□□ -0.36
TNRC6A-206ENST00000477487 NAA15Q9BXJ9 866 aaKnown RBP12.83□□□□□ -0.36
TNRC6A-206ENST00000477487 HAUS4Q9H6D7 363 aa12.83□□□□□ -0.36
TNRC6A-206ENST00000477487 MYH10P35580 1976 aa12.83□□□□□ -0.36
TNRC6A-206ENST00000477487 A0A087X0T9 212 aa12.82□□□□□ -0.36
TNRC6A-206ENST00000477487 A0A0B4J269 797 aa12.82□□□□□ -0.36
TNRC6A-206ENST00000477487 TREHO43280 583 aa12.82□□□□□ -0.36
TNRC6A-206ENST00000477487 C6orf222P0C671 652 aaPredicted RBP12.82□□□□□ -0.36
TNRC6A-206ENST00000477487 FAM228BP0C875 321 aa12.82□□□□□ -0.36
TNRC6A-206ENST00000477487 HOXD8P13378 290 aaPredicted RBP12.82□□□□□ -0.36
TNRC6A-206ENST00000477487 VEGFBP49765 207 aa12.82□□□□□ -0.36
TNRC6A-206ENST00000477487 KIF11P52732 1056 aa12.82□□□□□ -0.36
TNRC6A-206ENST00000477487 PTK2Q05397 1052 aa12.82□□□□□ -0.36
TNRC6A-206ENST00000477487 ASTE1Q2TB18 679 aaPredicted RBP12.82□□□□□ -0.36
TNRC6A-206ENST00000477487 EPC2Q52LR7 807 aa12.82□□□□□ -0.36
TNRC6A-206ENST00000477487 SFMBT2Q5VUG0 894 aa12.82□□□□□ -0.36
TNRC6A-206ENST00000477487 CDCA2Q69YH5 1023 aaPredicted RBP12.82□□□□□ -0.36
TNRC6A-206ENST00000477487 INTS8Q75QN2 995 aaKnown RBP12.82□□□□□ -0.36
TNRC6A-206ENST00000477487 SV2AQ7L0J3 742 aa12.82□□□□□ -0.36
TNRC6A-206ENST00000477487 ZNF571Q7Z3V5 609 aaPredicted RBP12.82□□□□□ -0.36
TNRC6A-206ENST00000477487 PALB2Q86YC2 1186 aa12.82□□□□□ -0.36
TNRC6A-206ENST00000477487 ZNF397Q8NF99 534 aaPredicted RBP12.82□□□□□ -0.36
TNRC6A-206ENST00000477487 MFSD14AQ96MC6 490 aa12.82□□□□□ -0.36
TNRC6A-206ENST00000477487 ACO2Q99798 780 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms