RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 AKT3Q9Y243 479 aa8.18□□□□□ -1.1
BRCA1-214ENST00000477152 DYRK1BQ9Y463 629 aa8.18□□□□□ -1.1
BRCA1-214ENST00000477152 NR2E1Q9Y466 385 aa8.18□□□□□ -1.1
BRCA1-214ENST00000477152 CHD7Q9P2D1 2997 aa8.18□□□□□ -1.1
BRCA1-214ENST00000477152 FNDC1Q4ZHG4 1894 aaPredicted RBP8.18□□□□□ -1.1
BRCA1-214ENST00000477152 PRPF3O43395 683 aaKnown RBP8.17□□□□□ -1.1
BRCA1-214ENST00000477152 DKC1O60832 514 aaKnown RBP eCLIP8.17□□□□□ -1.1
BRCA1-214ENST00000477152 F11P03951 625 aa8.17□□□□□ -1.1
BRCA1-214ENST00000477152 LTBRP36941 435 aa8.17□□□□□ -1.1
BRCA1-214ENST00000477152 PTSQ03393 145 aa8.17□□□□□ -1.1
BRCA1-214ENST00000477152 TYRO3Q06418 890 aa8.17□□□□□ -1.1
BRCA1-214ENST00000477152 ITGB3BPQ13352 177 aaPredicted RBP8.17□□□□□ -1.1
BRCA1-214ENST00000477152 GIT2Q14161 759 aa8.17□□□□□ -1.1
BRCA1-214ENST00000477152 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.17□□□□□ -1.1
BRCA1-214ENST00000477152 BMP8AQ7Z5Y6 402 aa8.17□□□□□ -1.1
BRCA1-214ENST00000477152 RTN4RL1Q86UN2 441 aaPredicted RBP8.17□□□□□ -1.1
BRCA1-214ENST00000477152 KIAA0319LQ8IZA0 1049 aa8.17□□□□□ -1.1
BRCA1-214ENST00000477152 FAM177A1Q8N128 213 aaPredicted RBP8.17□□□□□ -1.1
BRCA1-214ENST00000477152 LRRC43Q8N309 656 aa8.17□□□□□ -1.1
BRCA1-214ENST00000477152 RDM1Q8NG50 284 aa8.17□□□□□ -1.1
BRCA1-214ENST00000477152 TRAPPC12Q8WVT3 735 aa8.17□□□□□ -1.1
BRCA1-214ENST00000477152 DMRTB1Q96MA1 342 aa8.17□□□□□ -1.1
BRCA1-214ENST00000477152 PHF7Q9BWX1 381 aaPredicted RBP8.17□□□□□ -1.1
BRCA1-214ENST00000477152 OSBPL7Q9BZF2 842 aa8.17□□□□□ -1.1
BRCA1-214ENST00000477152 C11orf16Q9NQ32 467 aa8.17□□□□□ -1.1
BRCA1-214ENST00000477152 ENTPD7Q9NQZ7 604 aa8.17□□□□□ -1.1
BRCA1-214ENST00000477152 SH3GLB2Q9NR46 395 aa8.17□□□□□ -1.1
BRCA1-214ENST00000477152 TMEM260Q9NX78 707 aa8.17□□□□□ -1.1
BRCA1-214ENST00000477152 HCN2Q9UL51 889 aa8.17□□□□□ -1.1
BRCA1-214ENST00000477152 NOC2LQ9Y3T9 749 aaKnown RBP8.17□□□□□ -1.1
BRCA1-214ENST00000477152 KCNMB2Q9Y691 235 aa8.17□□□□□ -1.1
BRCA1-214ENST00000477152 ATG2AQ2TAZ0 1938 aa8.17□□□□□ -1.1
BRCA1-214ENST00000477152 PPFIA3O75145 1194 aa8.17□□□□□ -1.1
BRCA1-214ENST00000477152 FGF18O76093 207 aa8.17□□□□□ -1.1
BRCA1-214ENST00000477152 REC8O95072 547 aa8.17□□□□□ -1.1
BRCA1-214ENST00000477152 CSPG5O95196 566 aa8.17□□□□□ -1.1
BRCA1-214ENST00000477152 EOMESO95936 686 aa8.17□□□□□ -1.1
BRCA1-214ENST00000477152 LINC00271P0C7V0 271 aa8.17□□□□□ -1.1
BRCA1-214ENST00000477152 USP11P51784 963 aa8.17□□□□□ -1.1
BRCA1-214ENST00000477152 CES5AQ6NT32 575 aa8.17□□□□□ -1.1
BRCA1-214ENST00000477152 COLGALT1Q8NBJ5 622 aa8.17□□□□□ -1.1
BRCA1-214ENST00000477152 SMRP1Q8NCR6 262 aa8.17□□□□□ -1.1
BRCA1-214ENST00000477152 CYP2W1Q8TAV3 490 aa8.17□□□□□ -1.1
BRCA1-214ENST00000477152 LINC01599Q8WXQ3 324 aa8.17□□□□□ -1.1
BRCA1-214ENST00000477152 PIK3R5Q8WYR1 880 aa8.17□□□□□ -1.1
BRCA1-214ENST00000477152 MRPS27Q92552 414 aaKnown RBP8.17□□□□□ -1.1
BRCA1-214ENST00000477152 CASP10Q92851 521 aa8.17□□□□□ -1.1
BRCA1-214ENST00000477152 PGBD1Q96JS3 809 aa8.17□□□□□ -1.1
BRCA1-214ENST00000477152 MSLNLQ96KJ4 702 aa8.17□□□□□ -1.1
BRCA1-214ENST00000477152 ZNF558Q96NG5 402 aa8.17□□□□□ -1.1
BRCA1-214ENST00000477152 NECTIN4Q96NY8 510 aa8.17□□□□□ -1.1
BRCA1-214ENST00000477152 RIT2Q99578 217 aa8.17□□□□□ -1.1
BRCA1-214ENST00000477152 TEKT3Q9BXF9 490 aa8.17□□□□□ -1.1
BRCA1-214ENST00000477152 RNF26Q9BY78 433 aaPredicted RBP8.17□□□□□ -1.1
BRCA1-214ENST00000477152 CUEDC1Q9NWM3 386 aaPredicted RBP8.17□□□□□ -1.1
BRCA1-214ENST00000477152 FOXD3Q9UJU5 478 aaPredicted RBP8.17□□□□□ -1.1
BRCA1-214ENST00000477152 TELO2Q9Y4R8 837 aa8.17□□□□□ -1.1
BRCA1-214ENST00000477152 PLXNA4Q9HCM2 1894 aa8.16□□□□□ -1.1
BRCA1-214ENST00000477152 C9IYK1 514 aa8.16□□□□□ -1.1
BRCA1-214ENST00000477152 GAS7O60861 476 aa8.16□□□□□ -1.1
BRCA1-214ENST00000477152 TBX10O75333 385 aa8.16□□□□□ -1.1
BRCA1-214ENST00000477152 CIITAP33076 1130 aa8.16□□□□□ -1.1
BRCA1-214ENST00000477152 FAM189BP81408 668 aa8.16□□□□□ -1.1
BRCA1-214ENST00000477152 TBC1D8BQ0IIM8 1120 aa8.16□□□□□ -1.1
BRCA1-214ENST00000477152 SMC1AQ14683 1233 aaKnown RBP8.16□□□□□ -1.1
BRCA1-214ENST00000477152 DUSP6Q16828 381 aa8.16□□□□□ -1.1
BRCA1-214ENST00000477152 TMEM266Q2M3C6 531 aa8.16□□□□□ -1.1
BRCA1-214ENST00000477152 PRR16Q569H4 304 aa8.16□□□□□ -1.1
BRCA1-214ENST00000477152 EFCAB12Q6NXP0 572 aa8.16□□□□□ -1.1
BRCA1-214ENST00000477152 ELMSAN1Q6PJG2 1045 aa8.16□□□□□ -1.1
BRCA1-214ENST00000477152 RBM23Q86U06 439 aaKnown RBP8.16□□□□□ -1.1
BRCA1-214ENST00000477152 CCDC60Q8IWA6 550 aaPredicted RBP8.16□□□□□ -1.1
BRCA1-214ENST00000477152 RASGRP4Q8TDF6 673 aa8.16□□□□□ -1.1
BRCA1-214ENST00000477152 OSMRQ99650 979 aa8.16□□□□□ -1.1
BRCA1-214ENST00000477152 GCOM2Q9BZD3 368 aaPredicted RBP8.16□□□□□ -1.1
BRCA1-214ENST00000477152 TMX1Q9H3N1 280 aa8.16□□□□□ -1.1
BRCA1-214ENST00000477152 CHST12Q9NRB3 414 aa8.16□□□□□ -1.1
BRCA1-214ENST00000477152 SPG21Q9NZD8 308 aa8.16□□□□□ -1.1
BRCA1-214ENST00000477152 GABBR1Q9UBS5 961 aa8.16□□□□□ -1.1
BRCA1-214ENST00000477152 MUTYHQ9UIF7 546 aa8.16□□□□□ -1.1
BRCA1-214ENST00000477152 WDR81Q562E7 1941 aa8.15□□□□□ -1.1
BRCA1-214ENST00000477152 FAM86B1E9PN63 330 aa8.15□□□□□ -1.1
BRCA1-214ENST00000477152 C22orf31O95567 290 aa8.15□□□□□ -1.1
BRCA1-214ENST00000477152 CCNE2O96020 404 aa8.15□□□□□ -1.1
BRCA1-214ENST00000477152 FAM86B2P0C5J1 330 aa8.15□□□□□ -1.1
BRCA1-214ENST00000477152 XBP1P17861 261 aa8.15□□□□□ -1.1
BRCA1-214ENST00000477152 SFPQP23246 707 aaKnown RBP eCLIP8.15□□□□□ -1.1
BRCA1-214ENST00000477152 EIF4BP23588 611 aaKnown RBP8.15□□□□□ -1.1
BRCA1-214ENST00000477152 ALDH7A1P49419 539 aaKnown RBP8.15□□□□□ -1.1
BRCA1-214ENST00000477152 ARSDP51689 593 aa8.15□□□□□ -1.1
BRCA1-214ENST00000477152 NLRP11P59045 1033 aaKnown RBP8.15□□□□□ -1.1
BRCA1-214ENST00000477152 NLRP5P59047 1200 aa8.15□□□□□ -1.1
BRCA1-214ENST00000477152 IRX6P78412 446 aaPredicted RBP8.15□□□□□ -1.1
BRCA1-214ENST00000477152 KIZQ2M2Z5 673 aa8.15□□□□□ -1.1
BRCA1-214ENST00000477152 GALNT17Q6IS24 598 aa8.15□□□□□ -1.1
BRCA1-214ENST00000477152 TMEM184AQ6ZMB5 413 aa8.15□□□□□ -1.1
BRCA1-214ENST00000477152 Q6ZUG5 572 aa8.15□□□□□ -1.1
BRCA1-214ENST00000477152 ALYREFQ86V81 257 aaKnown RBP8.15□□□□□ -1.1
BRCA1-214ENST00000477152 FBXL16Q8N461 479 aa8.15□□□□□ -1.1
BRCA1-214ENST00000477152 NAP1L4Q99733 375 aaKnown RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms