RNA–Protein interactions for RNA: ENST00000476994.1

SREBF1-211, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-211ENST00000476994 PHKA2P46019 1235 aa19.36■□□□□ 0.69
SREBF1-211ENST00000476994 CRYBB1P53674 252 aaPredicted RBP19.36■□□□□ 0.69
SREBF1-211ENST00000476994 FAM187BQ17R55 369 aa19.36■□□□□ 0.69
SREBF1-211ENST00000476994 SASS6Q6UVJ0 657 aa19.36■□□□□ 0.69
SREBF1-211ENST00000476994 PPP4R3CPQ6ZMV5 832 aa19.36■□□□□ 0.69
SREBF1-211ENST00000476994 C11orf57Q6ZUT1 292 aaPredicted RBP19.36■□□□□ 0.69
SREBF1-211ENST00000476994 SRGAP1Q7Z6B7 1085 aa19.36■□□□□ 0.69
SREBF1-211ENST00000476994 NLRP7Q8WX94 980 aa19.36■□□□□ 0.69
SREBF1-211ENST00000476994 TOP1MTQ969P6 601 aa19.36■□□□□ 0.69
SREBF1-211ENST00000476994 C2orf40Q9H1Z8 148 aa19.36■□□□□ 0.69
SREBF1-211ENST00000476994 IKZF4Q9H2S9 585 aa19.36■□□□□ 0.69
SREBF1-211ENST00000476994 KCTD10Q9H3F6 313 aa19.36■□□□□ 0.69
SREBF1-211ENST00000476994 TBX20Q9UMR3 447 aa19.36■□□□□ 0.69
SREBF1-211ENST00000476994 TTLL13PA6NNM8 815 aa19.35■□□□□ 0.69
SREBF1-211ENST00000476994 CSDE1O75534 798 aaKnown RBP19.35■□□□□ 0.69
SREBF1-211ENST00000476994 PIGRP01833 764 aa19.35■□□□□ 0.69
SREBF1-211ENST00000476994 EFNA5P52803 228 aa19.35■□□□□ 0.69
SREBF1-211ENST00000476994 ZCWPW2Q504Y3 356 aa19.35■□□□□ 0.69
SREBF1-211ENST00000476994 ZBTB8OSQ8IWT0 167 aa19.35■□□□□ 0.69
SREBF1-211ENST00000476994 MLKLQ8NB16 471 aa19.35■□□□□ 0.69
SREBF1-211ENST00000476994 SP7Q8TDD2 431 aaPredicted RBP19.35■□□□□ 0.69
SREBF1-211ENST00000476994 C17orf80Q9BSJ5 609 aa19.35■□□□□ 0.69
SREBF1-211ENST00000476994 ANO10Q9NW15 660 aa19.35■□□□□ 0.69
SREBF1-211ENST00000476994 MAPK8IP1Q9UQF2 711 aa19.35■□□□□ 0.69
SREBF1-211ENST00000476994 PCDHB13Q9Y5F0 798 aa19.35■□□□□ 0.69
SREBF1-211ENST00000476994 TGFB1I1O43294 461 aa19.34■□□□□ 0.69
SREBF1-211ENST00000476994 CCDC192P0DO97 292 aa19.34■□□□□ 0.69
SREBF1-211ENST00000476994 EIF4BP23588 611 aaKnown RBP19.34■□□□□ 0.69
SREBF1-211ENST00000476994 TIGD5Q53EQ6 642 aa19.34■□□□□ 0.69
SREBF1-211ENST00000476994 FBXO47Q5MNV8 452 aa19.34■□□□□ 0.69
SREBF1-211ENST00000476994 SLC39A4Q6P5W5 647 aa19.34■□□□□ 0.69
SREBF1-211ENST00000476994 LRSAM1Q6UWE0 723 aa19.34■□□□□ 0.69
SREBF1-211ENST00000476994 GCOM2Q9BZD3 368 aaPredicted RBP19.34■□□□□ 0.69
SREBF1-211ENST00000476994 PDCD11Q14690 1871 aaKnown RBP19.33■□□□□ 0.69
SREBF1-211ENST00000476994 K7ERI5 159 aa19.33■□□□□ 0.68
SREBF1-211ENST00000476994 M0QZ92 97 aa19.33■□□□□ 0.68
SREBF1-211ENST00000476994 ABLIM1O14639 778 aa19.33■□□□□ 0.68
SREBF1-211ENST00000476994 PRKCBP05771 671 aa19.33■□□□□ 0.68
SREBF1-211ENST00000476994 ABCD1P33897 745 aa19.33■□□□□ 0.68
SREBF1-211ENST00000476994 PMS1P54277 932 aaKnown RBP19.33■□□□□ 0.68
SREBF1-211ENST00000476994 LPIN1Q14693 890 aa19.33■□□□□ 0.68
SREBF1-211ENST00000476994 MAPK6Q16659 721 aa19.33■□□□□ 0.68
SREBF1-211ENST00000476994 EPC2Q52LR7 807 aa19.33■□□□□ 0.68
SREBF1-211ENST00000476994 CENPPQ6IPU0 288 aa19.33■□□□□ 0.68
SREBF1-211ENST00000476994 STXBP4Q6ZWJ1 553 aa19.33■□□□□ 0.68
SREBF1-211ENST00000476994 FAM228AQ86W67 206 aa19.33■□□□□ 0.68
SREBF1-211ENST00000476994 NELFCDQ8IXH7 590 aa19.33■□□□□ 0.68
SREBF1-211ENST00000476994 MRPL38Q96DV4 380 aaKnown RBP19.33■□□□□ 0.68
SREBF1-211ENST00000476994 ACCSQ96QU6 501 aa19.33■□□□□ 0.68
SREBF1-211ENST00000476994 DNAJC25Q9H1X3 360 aa19.33■□□□□ 0.68
SREBF1-211ENST00000476994 UBE2ZQ9H832 354 aaPredicted RBP19.33■□□□□ 0.68
SREBF1-211ENST00000476994 AGO3Q9H9G7 860 aaKnown RBP19.33■□□□□ 0.68
SREBF1-211ENST00000476994 PRMT7Q9NVM4 692 aaPredicted RBP19.33■□□□□ 0.68
SREBF1-211ENST00000476994 GINS2Q9Y248 185 aa19.33■□□□□ 0.68
SREBF1-211ENST00000476994 USP20Q9Y2K6 914 aa19.33■□□□□ 0.68
SREBF1-211ENST00000476994 NOC2LQ9Y3T9 749 aaKnown RBP19.33■□□□□ 0.68
SREBF1-211ENST00000476994 RWDD3Q9Y3V2 267 aa19.33■□□□□ 0.68
SREBF1-211ENST00000476994 SQORQ9Y6N5 450 aa19.33■□□□□ 0.68
SREBF1-211ENST00000476994 COL4A6Q14031 1691 aa19.33■□□□□ 0.68
SREBF1-211ENST00000476994 CNTNAP2Q9UHC6 1331 aa19.32■□□□□ 0.68
SREBF1-211ENST00000476994 INO80B-WBP1J3KQ70 363 aa19.32■□□□□ 0.68
SREBF1-211ENST00000476994 ACKR2O00590 384 aa19.32■□□□□ 0.68
SREBF1-211ENST00000476994 B4GALT5O43286 388 aa19.32■□□□□ 0.68
SREBF1-211ENST00000476994 TSPAN1O60635 241 aa19.32■□□□□ 0.68
SREBF1-211ENST00000476994 FGFR4P22455 802 aa19.32■□□□□ 0.68
SREBF1-211ENST00000476994 PPP1R2P41236 205 aa19.32■□□□□ 0.68
SREBF1-211ENST00000476994 GPM6BQ13491 265 aa19.32■□□□□ 0.68
SREBF1-211ENST00000476994 KNOP1Q1ED39 458 aaKnown RBP19.32■□□□□ 0.68
SREBF1-211ENST00000476994 ANO6Q4KMQ2 910 aa19.32■□□□□ 0.68
SREBF1-211ENST00000476994 CT47A1Q5JQC4 288 aaPredicted RBP19.32■□□□□ 0.68
SREBF1-211ENST00000476994 FOXR2Q6PJQ5 311 aa19.32■□□□□ 0.68
SREBF1-211ENST00000476994 TMEM192Q8IY95 271 aa19.32■□□□□ 0.68
SREBF1-211ENST00000476994 FIBCD1Q8N539 461 aa19.32■□□□□ 0.68
SREBF1-211ENST00000476994 DHTKD1Q96HY7 919 aaPredicted RBP19.32■□□□□ 0.68
SREBF1-211ENST00000476994 PRIMPOLQ96LW4 560 aa19.32■□□□□ 0.68
SREBF1-211ENST00000476994 SCLT1Q96NL6 688 aa19.32■□□□□ 0.68
SREBF1-211ENST00000476994 INO80BQ9C086 356 aaPredicted RBP19.32■□□□□ 0.68
SREBF1-211ENST00000476994 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.31■□□□□ 0.68
SREBF1-211ENST00000476994 TISP43B9A030 160 aa19.31■□□□□ 0.68
SREBF1-211ENST00000476994 ANKRD63C9JTQ0 380 aa19.31■□□□□ 0.68
SREBF1-211ENST00000476994 H3BNC9 293 aa19.31■□□□□ 0.68
SREBF1-211ENST00000476994 GHRP10912 638 aa19.31■□□□□ 0.68
SREBF1-211ENST00000476994 PROZP22891 400 aa19.31■□□□□ 0.68
SREBF1-211ENST00000476994 CCNE1P24864 410 aa19.31■□□□□ 0.68
SREBF1-211ENST00000476994 HOXA11P31270 313 aaPredicted RBP19.31■□□□□ 0.68
SREBF1-211ENST00000476994 PCBP1Q15365 356 aaKnown RBP eCLIP19.31■□□□□ 0.689e-11■■■■□ 19.9
SREBF1-211ENST00000476994 TTI2Q6NXR4 508 aa19.31■□□□□ 0.68
SREBF1-211ENST00000476994 P2RX5Q93086 422 aa19.31■□□□□ 0.68
SREBF1-211ENST00000476994 ACO2Q99798 780 aaKnown RBP19.31■□□□□ 0.68
SREBF1-211ENST00000476994 TMEM206Q9H813 350 aa19.31■□□□□ 0.68
SREBF1-211ENST00000476994 PTPRHQ9HD43 1115 aa19.31■□□□□ 0.68
SREBF1-211ENST00000476994 ERVK-5Q9HDB9 667 aa19.31■□□□□ 0.68
SREBF1-211ENST00000476994 CTNND2Q9UQB3 1225 aa19.31■□□□□ 0.68
SREBF1-211ENST00000476994 TRAF3IP3Q9Y228 551 aa19.31■□□□□ 0.68
SREBF1-211ENST00000476994 STYXL1Q9Y6J8 313 aa19.31■□□□□ 0.68
SREBF1-211ENST00000476994 TTC3P53804 2025 aa19.3■□□□□ 0.68
SREBF1-211ENST00000476994 TRIM49BA6NDI0 452 aa19.3■□□□□ 0.68
SREBF1-211ENST00000476994 PDXKO00764 312 aa19.3■□□□□ 0.68
SREBF1-211ENST00000476994 PSMA7O14818 248 aa19.3■□□□□ 0.68
SREBF1-211ENST00000476994 ARF4P18085 180 aaPredicted RBP19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms