RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 USP41Q3LFD5 358 aa18.37■□□□□ 0.53
APOBEC3F-203ENST00000476513 FUT10Q6P4F1 479 aa18.37■□□□□ 0.53
APOBEC3F-203ENST00000476513 RNF149Q8NC42 400 aa18.37■□□□□ 0.53
APOBEC3F-203ENST00000476513 BRF1Q92994 677 aa18.37■□□□□ 0.53
APOBEC3F-203ENST00000476513 CEP170P1Q96L14 293 aa18.37■□□□□ 0.53
APOBEC3F-203ENST00000476513 MBOAT7Q96N66 472 aa18.37■□□□□ 0.53
APOBEC3F-203ENST00000476513 SLC26A6Q9BXS9 759 aa18.37■□□□□ 0.53
APOBEC3F-203ENST00000476513 PCDHGA2Q9Y5H1 932 aa18.37■□□□□ 0.53
APOBEC3F-203ENST00000476513 KMT2BQ9UMN6 2715 aaPredicted RBP18.36■□□□□ 0.53
APOBEC3F-203ENST00000476513 TSPAN1O60635 241 aa18.36■□□□□ 0.53
APOBEC3F-203ENST00000476513 ERLIN2O94905 339 aa18.36■□□□□ 0.53
APOBEC3F-203ENST00000476513 SDHBP21912 280 aa18.36■□□□□ 0.53
APOBEC3F-203ENST00000476513 QARSP47897 775 aaKnown RBP18.36■□□□□ 0.53
APOBEC3F-203ENST00000476513 NTHL1P78549 312 aa18.36■□□□□ 0.53
APOBEC3F-203ENST00000476513 COL4A3Q01955 1670 aa18.36■□□□□ 0.53
APOBEC3F-203ENST00000476513 UBXN2BQ14CS0 331 aa18.36■□□□□ 0.53
APOBEC3F-203ENST00000476513 MLF2Q15773 248 aaPredicted RBP18.36■□□□□ 0.53
APOBEC3F-203ENST00000476513 SLC44A4Q53GD3 710 aa18.36■□□□□ 0.53
APOBEC3F-203ENST00000476513 Q6ZUG5 572 aa18.36■□□□□ 0.53
APOBEC3F-203ENST00000476513 GRASPQ7Z6J2 395 aaPredicted RBP18.36■□□□□ 0.53
APOBEC3F-203ENST00000476513 EXOC8Q8IYI6 725 aa18.36■□□□□ 0.53
APOBEC3F-203ENST00000476513 GPR161Q8N6U8 529 aaKnown RBP18.36■□□□□ 0.53
APOBEC3F-203ENST00000476513 ATRIPQ8WXE1 791 aa18.36■□□□□ 0.53
APOBEC3F-203ENST00000476513 C22orf23Q9BZE7 217 aa18.36■□□□□ 0.53
APOBEC3F-203ENST00000476513 OSBPL6Q9BZF3 934 aa18.36■□□□□ 0.53
APOBEC3F-203ENST00000476513 SH3GLB2Q9NR46 395 aa18.36■□□□□ 0.53
APOBEC3F-203ENST00000476513 BMP2KQ9NSY1 1161 aaPredicted RBP18.36■□□□□ 0.53
APOBEC3F-203ENST00000476513 WRAP73Q9P2S5 460 aaPredicted RBP18.36■□□□□ 0.53
APOBEC3F-203ENST00000476513 FAM170BA6NMN3 283 aa18.35■□□□□ 0.53
APOBEC3F-203ENST00000476513 RFC5P40937 340 aa18.35■□□□□ 0.53
APOBEC3F-203ENST00000476513 CREMQ03060 361 aa18.35■□□□□ 0.53
APOBEC3F-203ENST00000476513 PRKCQQ04759 706 aa18.35■□□□□ 0.53
APOBEC3F-203ENST00000476513 FERMT3Q86UX7 667 aa18.35■□□□□ 0.53
APOBEC3F-203ENST00000476513 ZBTB44Q8NCP5 570 aa18.35■□□□□ 0.53
APOBEC3F-203ENST00000476513 RABGGTAQ92696 567 aa18.35■□□□□ 0.53
APOBEC3F-203ENST00000476513 CCDC51Q96ER9 411 aa18.35■□□□□ 0.53
APOBEC3F-203ENST00000476513 CPB2Q96IY4 423 aa18.35■□□□□ 0.53
APOBEC3F-203ENST00000476513 APOL6Q9BWW8 343 aa18.35■□□□□ 0.53
APOBEC3F-203ENST00000476513 FBXW11Q9UKB1 542 aa18.35■□□□□ 0.53
APOBEC3F-203ENST00000476513 ADAM28Q9UKQ2 775 aa18.35■□□□□ 0.53
APOBEC3F-203ENST00000476513 GIT1Q9Y2X7 761 aa18.35■□□□□ 0.53
APOBEC3F-203ENST00000476513 PPME1Q9Y570 386 aa18.35■□□□□ 0.53
APOBEC3F-203ENST00000476513 ASAP2O43150 1006 aa18.34■□□□□ 0.53
APOBEC3F-203ENST00000476513 IFNAR1P17181 557 aa18.34■□□□□ 0.53
APOBEC3F-203ENST00000476513 CD72P21854 359 aa18.34■□□□□ 0.53
APOBEC3F-203ENST00000476513 AXLP30530 894 aa18.34■□□□□ 0.53
APOBEC3F-203ENST00000476513 NOTUMQ6P988 496 aa18.34■□□□□ 0.53
APOBEC3F-203ENST00000476513 MOXD1Q6UVY6 613 aa18.34■□□□□ 0.53
APOBEC3F-203ENST00000476513 PRSS55Q6UWB4 352 aaPredicted RBP18.34■□□□□ 0.53
APOBEC3F-203ENST00000476513 MTSS1LQ765P7 747 aa18.34■□□□□ 0.53
APOBEC3F-203ENST00000476513 GSTCDQ8NEC7 633 aa18.34■□□□□ 0.53
APOBEC3F-203ENST00000476513 TCP11Q8WWU5 503 aa18.34■□□□□ 0.53
APOBEC3F-203ENST00000476513 FGF13Q92913 245 aa18.34■□□□□ 0.53
APOBEC3F-203ENST00000476513 CSRNP2Q9H175 543 aa18.34■□□□□ 0.53
APOBEC3F-203ENST00000476513 LTB4R2Q9NPC1 389 aa18.34■□□□□ 0.53
APOBEC3F-203ENST00000476513 DDX25Q9UHL0 483 aaKnown RBP18.34■□□□□ 0.53
APOBEC3F-203ENST00000476513 VAV3Q9UKW4 847 aa18.34■□□□□ 0.53
APOBEC3F-203ENST00000476513 PCDHA4Q9UN74 947 aa18.34■□□□□ 0.53
APOBEC3F-203ENST00000476513 SMG5Q9UPR3 1016 aaKnown RBP18.34■□□□□ 0.53
APOBEC3F-203ENST00000476513 PRR5-ARHGAP8B1AHC4 643 aa18.33■□□□□ 0.52
APOBEC3F-203ENST00000476513 SLC37A4O43826 429 aa18.33■□□□□ 0.52
APOBEC3F-203ENST00000476513 DKC1O60832 514 aaKnown RBP eCLIP18.33■□□□□ 0.52
APOBEC3F-203ENST00000476513 P4HBP07237 508 aaKnown RBP18.33■□□□□ 0.52
APOBEC3F-203ENST00000476513 HNRNPA1P09651 372 aaKnown RBP eCLIP18.33■□□□□ 0.52
APOBEC3F-203ENST00000476513 ARHGAP8P85298 464 aa18.33■□□□□ 0.52
APOBEC3F-203ENST00000476513 PPP2R5CQ13362 524 aa18.33■□□□□ 0.52
APOBEC3F-203ENST00000476513 EMC2Q15006 297 aa18.33■□□□□ 0.52
APOBEC3F-203ENST00000476513 PCBP1Q15365 356 aaKnown RBP eCLIP18.33■□□□□ 0.52
APOBEC3F-203ENST00000476513 RTP2Q5QGT7 225 aa18.33■□□□□ 0.52
APOBEC3F-203ENST00000476513 NELL1Q92832 810 aa18.33■□□□□ 0.52
APOBEC3F-203ENST00000476513 SECISBP2LQ93073 1101 aaKnown RBP18.33■□□□□ 0.52
APOBEC3F-203ENST00000476513 EPC1Q9H2F5 836 aa18.33■□□□□ 0.52
APOBEC3F-203ENST00000476513 NXF3Q9H4D5 531 aaKnown RBP18.33■□□□□ 0.52
APOBEC3F-203ENST00000476513 ZSCAN32Q9NX65 697 aa18.33■□□□□ 0.52
APOBEC3F-203ENST00000476513 CDV3Q9UKY7 258 aaKnown RBP18.33■□□□□ 0.52
APOBEC3F-203ENST00000476513 MTCL1Q9Y4B5 1905 aaKnown RBP18.32■□□□□ 0.52
APOBEC3F-203ENST00000476513 M0R2N6 131 aa18.32■□□□□ 0.52
APOBEC3F-203ENST00000476513 LILRB5O75023 590 aa18.32■□□□□ 0.52
APOBEC3F-203ENST00000476513 TADA2AO75478 443 aa18.32■□□□□ 0.52
APOBEC3F-203ENST00000476513 AKAP5P24588 427 aa18.32■□□□□ 0.52
APOBEC3F-203ENST00000476513 MAGEA9P43362 315 aa18.32■□□□□ 0.52
APOBEC3F-203ENST00000476513 PTENP60484 403 aa18.32■□□□□ 0.52
APOBEC3F-203ENST00000476513 PFKPQ01813 784 aa18.32■□□□□ 0.52
APOBEC3F-203ENST00000476513 LMNB2Q03252 620 aa18.32■□□□□ 0.52
APOBEC3F-203ENST00000476513 RSPO2Q6UXX9 243 aaPredicted RBP18.32■□□□□ 0.52
APOBEC3F-203ENST00000476513 ITFG1Q8TB96 612 aa18.32■□□□□ 0.52
APOBEC3F-203ENST00000476513 CLSTN3Q9BQT9 956 aa18.32■□□□□ 0.52
APOBEC3F-203ENST00000476513 NCOA5Q9HCD5 579 aaKnown RBP18.32■□□□□ 0.52
APOBEC3F-203ENST00000476513 CACNG4Q9UBN1 327 aa18.32■□□□□ 0.52
APOBEC3F-203ENST00000476513 FRYLO94915 3013 aa18.31■□□□□ 0.52
APOBEC3F-203ENST00000476513 DCDC2BA2VCK2 349 aa18.31■□□□□ 0.52
APOBEC3F-203ENST00000476513 INO80B-WBP1J3KQ70 363 aa18.31■□□□□ 0.52
APOBEC3F-203ENST00000476513 C8AP07357 584 aa18.31■□□□□ 0.52
APOBEC3F-203ENST00000476513 TGM1P22735 817 aa18.31■□□□□ 0.52
APOBEC3F-203ENST00000476513 YWHABP31946 246 aaKnown RBP18.31■□□□□ 0.52
APOBEC3F-203ENST00000476513 NCBP1Q09161 790 aaKnown RBP18.31■□□□□ 0.52
APOBEC3F-203ENST00000476513 GRIK3Q13003 919 aa18.31■□□□□ 0.52
APOBEC3F-203ENST00000476513 AMHR2Q16671 573 aa18.31■□□□□ 0.52
APOBEC3F-203ENST00000476513 PPM1LQ5SGD2 360 aa18.31■□□□□ 0.52
APOBEC3F-203ENST00000476513 ZBTB41Q5SVQ8 909 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms