RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 POMCP01189 267 aa17.88■□□□□ 0.45
COL1A1-205ENST00000476387 HSP90AA1P07900 732 aaKnown RBP17.88■□□□□ 0.45
COL1A1-205ENST00000476387 ARF4P18085 180 aaPredicted RBP17.88■□□□□ 0.45
COL1A1-205ENST00000476387 MTHFRP42898 656 aa17.88■□□□□ 0.45
COL1A1-205ENST00000476387 TRIM67Q6ZTA4 783 aa17.88■□□□□ 0.45
COL1A1-205ENST00000476387 SLC22A17Q8WUG5 538 aa17.88■□□□□ 0.45
COL1A1-205ENST00000476387 KIFAP3Q92845 792 aa17.88■□□□□ 0.45
COL1A1-205ENST00000476387 CPB2Q96IY4 423 aa17.88■□□□□ 0.45
COL1A1-205ENST00000476387 IFT74Q96LB3 600 aa17.88■□□□□ 0.45
COL1A1-205ENST00000476387 AK8Q96MA6 479 aa17.88■□□□□ 0.45
COL1A1-205ENST00000476387 RIPOR3Q96MK2 946 aa17.88■□□□□ 0.45
COL1A1-205ENST00000476387 MMTAG2Q9BU76 263 aaKnown RBP17.88■□□□□ 0.45
COL1A1-205ENST00000476387 TRIM6Q9C030 488 aaPredicted RBP17.88■□□□□ 0.45
COL1A1-205ENST00000476387 PRMT7Q9NVM4 692 aaPredicted RBP17.88■□□□□ 0.45
COL1A1-205ENST00000476387 GIT1Q9Y2X7 761 aa17.88■□□□□ 0.45
COL1A1-205ENST00000476387 NR2E1Q9Y466 385 aa17.88■□□□□ 0.45
COL1A1-205ENST00000476387 ZMYM2Q9UBW7 1377 aa17.88■□□□□ 0.45
COL1A1-205ENST00000476387 NRP1O14786 923 aa17.87■□□□□ 0.45
COL1A1-205ENST00000476387 NAMPTP43490 491 aa17.87■□□□□ 0.45
COL1A1-205ENST00000476387 DSC1Q08554 894 aa17.87■□□□□ 0.45
COL1A1-205ENST00000476387 SF3A1Q15459 793 aaKnown RBP17.87■□□□□ 0.45
COL1A1-205ENST00000476387 CDCA2Q69YH5 1023 aaPredicted RBP17.87■□□□□ 0.45
COL1A1-205ENST00000476387 SLC27A1Q6PCB7 646 aa17.87■□□□□ 0.45
COL1A1-205ENST00000476387 PPP4R3CPQ6ZMV5 832 aa17.87■□□□□ 0.45
COL1A1-205ENST00000476387 COLGALT2Q8IYK4 626 aa17.87■□□□□ 0.45
COL1A1-205ENST00000476387 DEPTORQ8TB45 409 aa17.87■□□□□ 0.45
COL1A1-205ENST00000476387 PRIMPOLQ96LW4 560 aa17.87■□□□□ 0.45
COL1A1-205ENST00000476387 GAD1Q99259 594 aa17.87■□□□□ 0.45
COL1A1-205ENST00000476387 EMILIN2Q9BXX0 1053 aa17.87■□□□□ 0.45
COL1A1-205ENST00000476387 RNF39Q9H2S5 420 aa17.87■□□□□ 0.45
COL1A1-205ENST00000476387 HES2Q9Y543 173 aa17.87■□□□□ 0.45
COL1A1-205ENST00000476387 ZDBF2Q9HCK1 2354 aa17.87■□□□□ 0.45
COL1A1-205ENST00000476387 A0A1B0GUA9 196 aa17.86■□□□□ 0.45
COL1A1-205ENST00000476387 TMEM221A6NGB7 291 aa17.86■□□□□ 0.45
COL1A1-205ENST00000476387 M0R296 226 aa17.86■□□□□ 0.45
COL1A1-205ENST00000476387 B4GALT5O43286 388 aa17.86■□□□□ 0.45
COL1A1-205ENST00000476387 LILRB3O75022 631 aa17.86■□□□□ 0.45
COL1A1-205ENST00000476387 EPCAMP16422 314 aa17.86■□□□□ 0.45
COL1A1-205ENST00000476387 HOXD11P31277 338 aaPredicted RBP17.86■□□□□ 0.45
COL1A1-205ENST00000476387 MLH1P40692 756 aa17.86■□□□□ 0.45
COL1A1-205ENST00000476387 RESTQ13127 1097 aa17.86■□□□□ 0.45
COL1A1-205ENST00000476387 PTPN21Q16825 1174 aa17.86■□□□□ 0.45
COL1A1-205ENST00000476387 TMEM132AQ24JP5 1023 aa17.86■□□□□ 0.45
COL1A1-205ENST00000476387 HYIQ5T013 277 aa17.86■□□□□ 0.45
COL1A1-205ENST00000476387 KIAA1841Q6NSI8 718 aa17.86■□□□□ 0.45
COL1A1-205ENST00000476387 CABP7Q86V35 215 aa17.86■□□□□ 0.45
COL1A1-205ENST00000476387 KCTD17Q8N5Z5 321 aa17.86■□□□□ 0.45
COL1A1-205ENST00000476387 RASSF8Q8NHQ8 419 aa17.86■□□□□ 0.45
COL1A1-205ENST00000476387 BSNDQ8WZ55 320 aa17.86■□□□□ 0.45
COL1A1-205ENST00000476387 POMKQ9H5K3 350 aa17.86■□□□□ 0.45
COL1A1-205ENST00000476387 MRPL17Q9NRX2 175 aaKnown RBP17.86■□□□□ 0.45
COL1A1-205ENST00000476387 SSX2IPQ9Y2D8 614 aa17.86■□□□□ 0.45
COL1A1-205ENST00000476387 SLC26A4O43511 780 aa17.85■□□□□ 0.45
COL1A1-205ENST00000476387 STX6O43752 255 aa17.85■□□□□ 0.45
COL1A1-205ENST00000476387 NR1I2O75469 434 aa17.85■□□□□ 0.45
COL1A1-205ENST00000476387 SOD2P04179 222 aa17.85■□□□□ 0.45
COL1A1-205ENST00000476387 SSBP05455 408 aaKnown RBP eCLIP17.85■□□□□ 0.45
COL1A1-205ENST00000476387 UBA7P41226 1012 aa17.85■□□□□ 0.45
COL1A1-205ENST00000476387 SIGLEC14Q08ET2 396 aa17.85■□□□□ 0.45
COL1A1-205ENST00000476387 MAPK6Q16659 721 aa17.85■□□□□ 0.45
COL1A1-205ENST00000476387 FAM187BQ17R55 369 aa17.85■□□□□ 0.45
COL1A1-205ENST00000476387 ATAT1Q5SQI0 421 aa17.85■□□□□ 0.45
COL1A1-205ENST00000476387 RARS2Q5T160 578 aaKnown RBP17.85■□□□□ 0.45
COL1A1-205ENST00000476387 CALML4Q96GE6 196 aa17.85■□□□□ 0.45
COL1A1-205ENST00000476387 DRC1Q96MC2 740 aa17.85■□□□□ 0.45
COL1A1-205ENST00000476387 ZFP42Q96MM3 310 aa17.85■□□□□ 0.45
COL1A1-205ENST00000476387 KLHL5Q96PQ7 755 aa17.85■□□□□ 0.45
COL1A1-205ENST00000476387 HERC2P3Q9BVR0 1158 aa17.85■□□□□ 0.45
COL1A1-205ENST00000476387 NXF3Q9H4D5 531 aaKnown RBP17.85■□□□□ 0.45
COL1A1-205ENST00000476387 SFXN1Q9H9B4 322 aa17.85■□□□□ 0.45
COL1A1-205ENST00000476387 MARCH5Q9NX47 278 aa17.85■□□□□ 0.45
COL1A1-205ENST00000476387 DAXXQ9UER7 740 aaPredicted RBP17.85■□□□□ 0.45
COL1A1-205ENST00000476387 MTMR6Q9Y217 621 aa17.85■□□□□ 0.45
COL1A1-205ENST00000476387 EFEMP2O95967 443 aa17.84■□□□□ 0.45
COL1A1-205ENST00000476387 PRKCBP05771 671 aa17.84■□□□□ 0.45
COL1A1-205ENST00000476387 URODP06132 367 aa17.84■□□□□ 0.45
COL1A1-205ENST00000476387 CNPP09543 421 aaKnown RBP17.84■□□□□ 0.45
COL1A1-205ENST00000476387 LIG1P18858 919 aa17.84■□□□□ 0.45
COL1A1-205ENST00000476387 KLRC2P26717 231 aa17.84■□□□□ 0.45
COL1A1-205ENST00000476387 LONP1P36776 959 aaKnown RBP17.84■□□□□ 0.45
COL1A1-205ENST00000476387 OR1G1P47890 313 aa17.84■□□□□ 0.45
COL1A1-205ENST00000476387 SCNN1GP51170 649 aa17.84■□□□□ 0.45
COL1A1-205ENST00000476387 CLCN4P51793 760 aa17.84■□□□□ 0.45
COL1A1-205ENST00000476387 KCNK18Q7Z418 384 aa17.84■□□□□ 0.45
COL1A1-205ENST00000476387 RNF168Q8IYW5 571 aaPredicted RBP17.84■□□□□ 0.45
COL1A1-205ENST00000476387 FBXL18Q96ME1 805 aa17.84■□□□□ 0.45
COL1A1-205ENST00000476387 PNMA5Q96PV4 448 aa17.84■□□□□ 0.45
COL1A1-205ENST00000476387 PLIN2Q99541 437 aa17.84■□□□□ 0.45
COL1A1-205ENST00000476387 TIPINQ9BVW5 301 aa17.84■□□□□ 0.45
COL1A1-205ENST00000476387 APOL6Q9BWW8 343 aa17.84■□□□□ 0.45
COL1A1-205ENST00000476387 FZD8Q9H461 694 aa17.84■□□□□ 0.45
COL1A1-205ENST00000476387 ZSCAN16Q9H4T2 348 aaPredicted RBP17.84■□□□□ 0.45
COL1A1-205ENST00000476387 TSHZ2Q9NRE2 1034 aa17.84■□□□□ 0.45
COL1A1-205ENST00000476387 MIOSQ9NXC5 875 aa17.84■□□□□ 0.45
COL1A1-205ENST00000476387 CDH22Q9UJ99 828 aa17.84■□□□□ 0.45
COL1A1-205ENST00000476387 PRG3Q9Y2Y8 225 aaPredicted RBP17.84■□□□□ 0.45
COL1A1-205ENST00000476387 CCDC169A6NNP5 214 aa17.83■□□□□ 0.44
COL1A1-205ENST00000476387 N4BP3O15049 544 aa17.83■□□□□ 0.44
COL1A1-205ENST00000476387 HIP1RO75146 1068 aa17.83■□□□□ 0.44
COL1A1-205ENST00000476387 NPTXRO95502 500 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms