RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 PRSS47A8MTI9 375 aa4.98□□□□□ -1.61
VPS13D-207ENST00000476169 M0R3H8 397 aa4.98□□□□□ -1.61
VPS13D-207ENST00000476169 MAFO75444 373 aaPredicted RBP4.98□□□□□ -1.61
VPS13D-207ENST00000476169 ALDH2P05091 517 aa4.98□□□□□ -1.61
VPS13D-207ENST00000476169 HSD3B1P14060 373 aa4.98□□□□□ -1.61
VPS13D-207ENST00000476169 GSPT1P15170 499 aaKnown RBP4.98□□□□□ -1.61
VPS13D-207ENST00000476169 EDNRBP24530 442 aa4.98□□□□□ -1.61
VPS13D-207ENST00000476169 IL6STP40189 918 aaPredicted RBP4.98□□□□□ -1.61
VPS13D-207ENST00000476169 PIK3CBP42338 1070 aa4.98□□□□□ -1.61
VPS13D-207ENST00000476169 TECP42680 631 aa4.98□□□□□ -1.61
VPS13D-207ENST00000476169 WASP42768 502 aa4.98□□□□□ -1.61
VPS13D-207ENST00000476169 MCAMP43121 646 aa4.98□□□□□ -1.61
VPS13D-207ENST00000476169 SRSF3P84103 164 aaKnown RBP4.98□□□□□ -1.61
VPS13D-207ENST00000476169 ICA1Q05084 483 aa4.98□□□□□ -1.61
VPS13D-207ENST00000476169 MGAT5Q09328 741 aa4.98□□□□□ -1.61
VPS13D-207ENST00000476169 PDE1CQ14123 709 aaPredicted RBP4.98□□□□□ -1.61
VPS13D-207ENST00000476169 DGKDQ16760 1214 aa4.98□□□□□ -1.61
VPS13D-207ENST00000476169 WDR72Q3MJ13 1102 aa4.98□□□□□ -1.61
VPS13D-207ENST00000476169 C3orf36Q3SXR2 165 aa4.98□□□□□ -1.61
VPS13D-207ENST00000476169 ANO6Q4KMQ2 910 aa4.98□□□□□ -1.61
VPS13D-207ENST00000476169 ZMYM1Q5SVZ6 1142 aa4.98□□□□□ -1.61
VPS13D-207ENST00000476169 LMBR1LQ6UX01 489 aa4.98□□□□□ -1.61
VPS13D-207ENST00000476169 GPR155Q7Z3F1 870 aa4.98□□□□□ -1.61
VPS13D-207ENST00000476169 LIX1LQ8IVB5 337 aa4.98□□□□□ -1.61
VPS13D-207ENST00000476169 SUGP1Q8IWZ8 645 aaKnown RBP4.98□□□□□ -1.61
VPS13D-207ENST00000476169 CCDC33Q8N5R6 958 aa4.98□□□□□ -1.61
VPS13D-207ENST00000476169 STPG3Q8N7X2 389 aa4.98□□□□□ -1.61
VPS13D-207ENST00000476169 GLB1L3Q8NCI6 653 aaPredicted RBP4.98□□□□□ -1.61
VPS13D-207ENST00000476169 SMARCC2Q8TAQ2 1214 aa4.98□□□□□ -1.61
VPS13D-207ENST00000476169 DPF2Q92785 391 aa4.98□□□□□ -1.61
VPS13D-207ENST00000476169 HDAC10Q969S8 669 aa4.98□□□□□ -1.61
VPS13D-207ENST00000476169 DYDC2Q96IM9 177 aa4.98□□□□□ -1.61
VPS13D-207ENST00000476169 PAWRQ96IZ0 340 aaKnown RBP4.98□□□□□ -1.61
VPS13D-207ENST00000476169 ZSWIM3Q96MP5 696 aa4.98□□□□□ -1.61
VPS13D-207ENST00000476169 CLIC6Q96NY7 704 aa4.98□□□□□ -1.61
VPS13D-207ENST00000476169 CGRRF1Q99675 332 aa4.98□□□□□ -1.61
VPS13D-207ENST00000476169 ZNF552Q9H707 407 aaPredicted RBP4.98□□□□□ -1.61
VPS13D-207ENST00000476169 PCDH18Q9HCL0 1135 aa4.98□□□□□ -1.61
VPS13D-207ENST00000476169 SMC4Q9NTJ3 1288 aa4.98□□□□□ -1.61
VPS13D-207ENST00000476169 POLR3BQ9NW08 1133 aaPredicted RBP4.98□□□□□ -1.61
VPS13D-207ENST00000476169 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.98□□□□□ -1.61
VPS13D-207ENST00000476169 L1RE1Q9UN81 338 aa4.98□□□□□ -1.61
VPS13D-207ENST00000476169 PCDHGB2Q9Y5G2 931 aa4.98□□□□□ -1.61
VPS13D-207ENST00000476169 J3KRW8 73 aa4.97□□□□□ -1.61
VPS13D-207ENST00000476169 BIN1O00499 593 aa4.97□□□□□ -1.61
VPS13D-207ENST00000476169 FIBPO43427 364 aa4.97□□□□□ -1.61
VPS13D-207ENST00000476169 NCK2O43639 380 aa4.97□□□□□ -1.61
VPS13D-207ENST00000476169 HYAL3O43820 417 aaPredicted RBP4.97□□□□□ -1.61
VPS13D-207ENST00000476169 SNX2O60749 519 aa4.97□□□□□ -1.61
VPS13D-207ENST00000476169 IL18BPO95998 194 aa4.97□□□□□ -1.61
VPS13D-207ENST00000476169 PFKLP17858 780 aa4.97□□□□□ -1.61
VPS13D-207ENST00000476169 NCKAP1LP55160 1127 aa4.97□□□□□ -1.61
VPS13D-207ENST00000476169 GP2P55259 537 aaKnown RBP4.97□□□□□ -1.61
VPS13D-207ENST00000476169 POU5F1Q01860 360 aaKnown RBP4.97□□□□□ -1.61
VPS13D-207ENST00000476169 STARD3Q14849 445 aa4.97□□□□□ -1.61
VPS13D-207ENST00000476169 POLD3Q15054 466 aaPredicted RBP4.97□□□□□ -1.61
VPS13D-207ENST00000476169 PRR16Q569H4 304 aa4.97□□□□□ -1.61
VPS13D-207ENST00000476169 FAM209BQ5JX69 171 aa4.97□□□□□ -1.61
VPS13D-207ENST00000476169 DGKKQ5KSL6 1271 aa4.97□□□□□ -1.61
VPS13D-207ENST00000476169 IZUMO3Q5VZ72 239 aa4.97□□□□□ -1.61
VPS13D-207ENST00000476169 GRAMD4Q6IC98 578 aa4.97□□□□□ -1.61
VPS13D-207ENST00000476169 PPP4R3AQ6IN85 833 aa4.97□□□□□ -1.61
VPS13D-207ENST00000476169 GGT6Q6P531 493 aa4.97□□□□□ -1.61
VPS13D-207ENST00000476169 TLDC1Q6P9B6 456 aa4.97□□□□□ -1.61
VPS13D-207ENST00000476169 FAM180AQ6UWF9 173 aa4.97□□□□□ -1.61
VPS13D-207ENST00000476169 MPZL3Q6UWV2 235 aa4.97□□□□□ -1.61
VPS13D-207ENST00000476169 MIGA2Q7L4E1 593 aa4.97□□□□□ -1.61
VPS13D-207ENST00000476169 CXXC5Q7LFL8 322 aaKnown RBP4.97□□□□□ -1.61
VPS13D-207ENST00000476169 B3GNT8Q7Z7M8 397 aa4.97□□□□□ -1.61
VPS13D-207ENST00000476169 STK32CQ86UX6 486 aa4.97□□□□□ -1.61
VPS13D-207ENST00000476169 ANKRD18AQ8IVF6 992 aa4.97□□□□□ -1.61
VPS13D-207ENST00000476169 KRT78Q8N1N4 520 aa4.97□□□□□ -1.61
VPS13D-207ENST00000476169 NAXEQ8NCW5 288 aa4.97□□□□□ -1.61
VPS13D-207ENST00000476169 NSUN6Q8TEA1 469 aaKnown RBP4.97□□□□□ -1.61
VPS13D-207ENST00000476169 RIN2Q8WYP3 895 aaPredicted RBP4.97□□□□□ -1.61
VPS13D-207ENST00000476169 KAT5Q92993 513 aa4.97□□□□□ -1.61
VPS13D-207ENST00000476169 WRNIP1Q96S55 665 aa4.97□□□□□ -1.61
VPS13D-207ENST00000476169 SYT3Q9BQG1 590 aa4.97□□□□□ -1.61
VPS13D-207ENST00000476169 FDXACB1Q9BRP7 624 aaPredicted RBP4.97□□□□□ -1.61
VPS13D-207ENST00000476169 ISCA1Q9BUE6 129 aa4.97□□□□□ -1.61
VPS13D-207ENST00000476169 AGO4Q9HCK5 861 aaKnown RBP4.97□□□□□ -1.61
VPS13D-207ENST00000476169 SIRT5Q9NXA8 310 aa4.97□□□□□ -1.61
VPS13D-207ENST00000476169 SCOCQ9UIL1 159 aa4.97□□□□□ -1.61
VPS13D-207ENST00000476169 MAGEL2Q9UJ55 1249 aa4.97□□□□□ -1.61
VPS13D-207ENST00000476169 CEP83Q9Y592 693 aa4.97□□□□□ -1.61
VPS13D-207ENST00000476169 LRRFIP2Q9Y608 721 aaKnown RBP4.97□□□□□ -1.61
VPS13D-207ENST00000476169 A0A087WV62 115 aa4.96□□□□□ -1.62
VPS13D-207ENST00000476169 A0A0A6YYK5 440 aaPredicted RBP4.96□□□□□ -1.62
VPS13D-207ENST00000476169 FAM171A2A8MVW0 826 aa4.96□□□□□ -1.62
VPS13D-207ENST00000476169 SEC24DO94855 1032 aaPredicted RBP4.96□□□□□ -1.62
VPS13D-207ENST00000476169 PYGLP06737 847 aa4.96□□□□□ -1.62
VPS13D-207ENST00000476169 ATF2P15336 505 aa4.96□□□□□ -1.62
VPS13D-207ENST00000476169 SMARCA1P28370 1054 aa4.96□□□□□ -1.62
VPS13D-207ENST00000476169 ADCY8P40145 1251 aa4.96□□□□□ -1.62
VPS13D-207ENST00000476169 STT3AP46977 705 aa4.96□□□□□ -1.62
VPS13D-207ENST00000476169 ITGA1P56199 1179 aa4.96□□□□□ -1.62
VPS13D-207ENST00000476169 ANTXR2P58335 489 aa4.96□□□□□ -1.62
VPS13D-207ENST00000476169 PPFIA1Q13136 1202 aa4.96□□□□□ -1.62
VPS13D-207ENST00000476169 GRM1Q13255 1194 aa4.96□□□□□ -1.62
VPS13D-207ENST00000476169 ADAM9Q13443 819 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms