RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 SOWAHDA6NJG2 315 aa14.92□□□□□ -0.02
TRAF4-210ENST00000475329 PMM2O15305 246 aa14.92□□□□□ -0.02
TRAF4-210ENST00000475329 ADAMTS4O75173 837 aa14.92□□□□□ -0.02
TRAF4-210ENST00000475329 SLC9A1P19634 815 aa14.92□□□□□ -0.02
TRAF4-210ENST00000475329 GTF2H1P32780 548 aa14.92□□□□□ -0.02
TRAF4-210ENST00000475329 MXI1P50539 228 aa14.92□□□□□ -0.02
TRAF4-210ENST00000475329 NLRP11P59045 1033 aaKnown RBP14.92□□□□□ -0.02
TRAF4-210ENST00000475329 POLR2FP61218 127 aaKnown RBP14.92□□□□□ -0.02
TRAF4-210ENST00000475329 ADAM17P78536 824 aa14.92□□□□□ -0.02
TRAF4-210ENST00000475329 PSMD6Q15008 389 aa14.92□□□□□ -0.02
TRAF4-210ENST00000475329 MEA1Q16626 185 aa14.92□□□□□ -0.02
TRAF4-210ENST00000475329 C1orf220Q5T0J3 134 aa14.92□□□□□ -0.02
TRAF4-210ENST00000475329 MAP3K21Q5TCX8 1036 aa14.92□□□□□ -0.02
TRAF4-210ENST00000475329 ATF7IP2Q5U623 682 aa14.92□□□□□ -0.02
TRAF4-210ENST00000475329 KLHDC7AQ5VTJ3 777 aa14.92□□□□□ -0.02
TRAF4-210ENST00000475329 MPZL3Q6UWV2 235 aa14.92□□□□□ -0.02
TRAF4-210ENST00000475329 RRAGAQ7L523 313 aa14.92□□□□□ -0.02
TRAF4-210ENST00000475329 SRGAP1Q7Z6B7 1085 aa14.92□□□□□ -0.02
TRAF4-210ENST00000475329 SLAIN1Q8ND83 568 aa14.92□□□□□ -0.02
TRAF4-210ENST00000475329 PARD3BQ8TEW8 1205 aa14.92□□□□□ -0.02
TRAF4-210ENST00000475329 ZNF296Q8WUU4 475 aaPredicted RBP14.92□□□□□ -0.02
TRAF4-210ENST00000475329 BAP1Q92560 729 aa14.92□□□□□ -0.02
TRAF4-210ENST00000475329 CCDC127Q96BQ5 260 aa14.92□□□□□ -0.02
TRAF4-210ENST00000475329 PRIMPOLQ96LW4 560 aa14.92□□□□□ -0.02
TRAF4-210ENST00000475329 PPP1R16BQ96T49 567 aa14.92□□□□□ -0.02
TRAF4-210ENST00000475329 TCHPQ9BT92 498 aa14.92□□□□□ -0.02
TRAF4-210ENST00000475329 INTS2Q9H0H0 1204 aaKnown RBP14.92□□□□□ -0.02
TRAF4-210ENST00000475329 FAM49AQ9H0Q0 323 aaPredicted RBP14.92□□□□□ -0.02
TRAF4-210ENST00000475329 MINDY3Q9H8M7 445 aa14.92□□□□□ -0.02
TRAF4-210ENST00000475329 LRRC53A6NM62 1247 aa14.91□□□□□ -0.02
TRAF4-210ENST00000475329 TTLL13PA6NNM8 815 aa14.91□□□□□ -0.02
TRAF4-210ENST00000475329 LRRIQ3A6PVS8 624 aaPredicted RBP14.91□□□□□ -0.02
TRAF4-210ENST00000475329 OGTO15294 1046 aa14.91□□□□□ -0.02
TRAF4-210ENST00000475329 HARSP12081 509 aaKnown RBP14.91□□□□□ -0.02
TRAF4-210ENST00000475329 ACTN1P12814 892 aa14.91□□□□□ -0.02
TRAF4-210ENST00000475329 PROZP22891 400 aa14.91□□□□□ -0.02
TRAF4-210ENST00000475329 CST5P28325 142 aaPredicted RBP14.91□□□□□ -0.02
TRAF4-210ENST00000475329 HOXC8P31273 242 aa14.91□□□□□ -0.02
TRAF4-210ENST00000475329 HNRNPH3P31942 346 aaKnown RBP14.91□□□□□ -0.02
TRAF4-210ENST00000475329 GCLMP48507 274 aa14.91□□□□□ -0.02
TRAF4-210ENST00000475329 MCL1Q07820 350 aa14.91□□□□□ -0.02
TRAF4-210ENST00000475329 PPP3CAQ08209 521 aa14.91□□□□□ -0.02
TRAF4-210ENST00000475329 ZNF568Q3ZCX4 644 aa14.91□□□□□ -0.02
TRAF4-210ENST00000475329 E4F1Q66K89 784 aaPredicted RBP14.91□□□□□ -0.02
TRAF4-210ENST00000475329 TRIM65Q6PJ69 517 aa14.91□□□□□ -0.02
TRAF4-210ENST00000475329 RUFY4Q6ZNE9 571 aa14.91□□□□□ -0.02
TRAF4-210ENST00000475329 ZBTB33Q86T24 672 aa14.91□□□□□ -0.02
TRAF4-210ENST00000475329 CCAR2Q8N163 923 aaKnown RBP14.91□□□□□ -0.02
TRAF4-210ENST00000475329 PPP1R13LQ8WUF5 828 aa14.91□□□□□ -0.02
TRAF4-210ENST00000475329 BEGAINQ9BUH8 593 aa14.91□□□□□ -0.02
TRAF4-210ENST00000475329 TMEM8AQ9HCN3 771 aa14.91□□□□□ -0.02
TRAF4-210ENST00000475329 SIX2Q9NPC8 291 aa14.91□□□□□ -0.02
TRAF4-210ENST00000475329 NLRC4Q9NPP4 1024 aa14.91□□□□□ -0.02
TRAF4-210ENST00000475329 RBAKQ9NYW8 714 aaPredicted RBP14.91□□□□□ -0.02
TRAF4-210ENST00000475329 HDAC6Q9UBN7 1215 aa14.91□□□□□ -0.02
TRAF4-210ENST00000475329 DDX20Q9UHI6 824 aaKnown RBP14.91□□□□□ -0.02
TRAF4-210ENST00000475329 FBXL5Q9UKA1 691 aa14.91□□□□□ -0.02
TRAF4-210ENST00000475329 TNFSF13BQ9Y275 285 aa14.91□□□□□ -0.02
TRAF4-210ENST00000475329 ABLIM1O14639 778 aa14.9□□□□□ -0.02
TRAF4-210ENST00000475329 B4GALT5O43286 388 aa14.9□□□□□ -0.02
TRAF4-210ENST00000475329 ERLIN2O94905 339 aa14.9□□□□□ -0.02
TRAF4-210ENST00000475329 UCHL3P15374 230 aa14.9□□□□□ -0.02
TRAF4-210ENST00000475329 RFX1P22670 979 aa14.9□□□□□ -0.02
TRAF4-210ENST00000475329 CLCN1P35523 988 aa14.9□□□□□ -0.02
TRAF4-210ENST00000475329 ACOT2P49753 483 aa14.9□□□□□ -0.02
TRAF4-210ENST00000475329 CDK17Q00537 523 aa14.9□□□□□ -0.02
TRAF4-210ENST00000475329 APBA1Q02410 837 aa14.9□□□□□ -0.02
TRAF4-210ENST00000475329 MAP2K1Q02750 393 aaPredicted RBP14.9□□□□□ -0.02
TRAF4-210ENST00000475329 HIC1Q14526 733 aa14.9□□□□□ -0.02
TRAF4-210ENST00000475329 EPC2Q52LR7 807 aa14.9□□□□□ -0.02
TRAF4-210ENST00000475329 SFMBT2Q5VUG0 894 aa14.9□□□□□ -0.02
TRAF4-210ENST00000475329 KRT39Q6A163 491 aa14.9□□□□□ -0.02
TRAF4-210ENST00000475329 DPY19L2P1Q6NXN4 242 aa14.9□□□□□ -0.02
TRAF4-210ENST00000475329 WDR59Q6PJI9 974 aa14.9□□□□□ -0.02
TRAF4-210ENST00000475329 CXCL17Q6UXB2 119 aa14.9□□□□□ -0.02
TRAF4-210ENST00000475329 CRELD2Q6UXH1 353 aaPredicted RBP14.9□□□□□ -0.02
TRAF4-210ENST00000475329 RAD9BQ6WBX8 426 aa14.9□□□□□ -0.02
TRAF4-210ENST00000475329 TNS4Q8IZW8 715 aa14.9□□□□□ -0.02
TRAF4-210ENST00000475329 ZNF710Q8N1W2 664 aa14.9□□□□□ -0.02
TRAF4-210ENST00000475329 KLHDC9Q8NEP7 349 aa14.9□□□□□ -0.02
TRAF4-210ENST00000475329 SYN2Q92777 582 aaPredicted RBP14.9□□□□□ -0.02
TRAF4-210ENST00000475329 FNBP1Q96RU3 617 aa14.9□□□□□ -0.02
TRAF4-210ENST00000475329 GCOM2Q9BZD3 368 aaPredicted RBP14.9□□□□□ -0.02
TRAF4-210ENST00000475329 TMEM117Q9H0C3 514 aa14.9□□□□□ -0.02
TRAF4-210ENST00000475329 ADAMTS10Q9H324 1103 aa14.9□□□□□ -0.02
TRAF4-210ENST00000475329 PTPRHQ9HD43 1115 aa14.9□□□□□ -0.02
TRAF4-210ENST00000475329 MYO6Q9UM54 1294 aa14.9□□□□□ -0.02
TRAF4-210ENST00000475329 PLAGL2Q9UPG8 496 aa14.9□□□□□ -0.02
TRAF4-210ENST00000475329 FHOD1Q9Y613 1164 aa14.9□□□□□ -0.02
TRAF4-210ENST00000475329 PDCD11Q14690 1871 aaKnown RBP14.89□□□□□ -0.03
TRAF4-210ENST00000475329 TULP1O00294 542 aaPredicted RBP14.89□□□□□ -0.03
TRAF4-210ENST00000475329 TREHO43280 583 aa14.89□□□□□ -0.03
TRAF4-210ENST00000475329 ZSCAN12O43309 604 aa14.89□□□□□ -0.03
TRAF4-210ENST00000475329 FAM189A1O60320 539 aa14.89□□□□□ -0.03
TRAF4-210ENST00000475329 INHAP05111 366 aa14.89□□□□□ -0.03
TRAF4-210ENST00000475329 DLATP10515 647 aaKnown RBP14.89□□□□□ -0.03
TRAF4-210ENST00000475329 CLDN10P78369 228 aa14.89□□□□□ -0.03
TRAF4-210ENST00000475329 RAPGEF1Q13905 1077 aa14.89□□□□□ -0.03
TRAF4-210ENST00000475329 MTF1Q14872 753 aa14.89□□□□□ -0.03
TRAF4-210ENST00000475329 AMHR2Q16671 573 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms