RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 NCAPHQ15003 741 aa11.62□□□□□ -0.55
VAPB-204ENST00000475243 PID1Q7Z2X4 250 aa11.62□□□□□ -0.55
VAPB-204ENST00000475243 GPD1LQ8N335 351 aa11.62□□□□□ -0.55
VAPB-204ENST00000475243 SLC26A7Q8TE54 656 aa11.62□□□□□ -0.55
VAPB-204ENST00000475243 EXOC4Q96A65 974 aa11.62□□□□□ -0.55
VAPB-204ENST00000475243 MXD3Q9BW11 206 aa11.62□□□□□ -0.55
VAPB-204ENST00000475243 ELP3Q9H9T3 547 aa11.62□□□□□ -0.55
VAPB-204ENST00000475243 STK36Q9NRP7 1315 aa11.62□□□□□ -0.55
VAPB-204ENST00000475243 A0A0G2JLW4 131 aa11.62□□□□□ -0.55
VAPB-204ENST00000475243 ARSEP51690 589 aa11.62□□□□□ -0.55
VAPB-204ENST00000475243 BTBD8Q5XKL5 378 aa11.62□□□□□ -0.55
VAPB-204ENST00000475243 TMEM143Q96AN5 459 aa11.62□□□□□ -0.55
VAPB-204ENST00000475243 LRRC37BQ96QE4 947 aa11.62□□□□□ -0.55
VAPB-204ENST00000475243 MYCBPQ99417 103 aaPredicted RBP11.62□□□□□ -0.55
VAPB-204ENST00000475243 MIF4GDA9UHW6 222 aaKnown RBP11.62□□□□□ -0.55
VAPB-204ENST00000475243 OCM2P0CE71 109 aa11.62□□□□□ -0.55
VAPB-204ENST00000475243 OCMP0CE72 109 aaPredicted RBP11.62□□□□□ -0.55
VAPB-204ENST00000475243 NUDCD3Q8IVD9 361 aa11.62□□□□□ -0.55
VAPB-204ENST00000475243 GLYCTKQ8IVS8 523 aa11.62□□□□□ -0.55
VAPB-204ENST00000475243 ACTR5Q9H9F9 607 aaPredicted RBP11.62□□□□□ -0.55
VAPB-204ENST00000475243 TJP2Q9UDY2 1190 aa11.62□□□□□ -0.55
VAPB-204ENST00000475243 KCNN4O15554 427 aa11.62□□□□□ -0.55
VAPB-204ENST00000475243 PDGFRBP09619 1106 aa11.62□□□□□ -0.55
VAPB-204ENST00000475243 CYP19A1P11511 503 aaPredicted RBP11.62□□□□□ -0.55
VAPB-204ENST00000475243 RGS7P49802 495 aa11.62□□□□□ -0.55
VAPB-204ENST00000475243 KRT39Q6A163 491 aa11.62□□□□□ -0.55
VAPB-204ENST00000475243 DDX53Q86TM3 631 aaKnown RBP11.62□□□□□ -0.55
VAPB-204ENST00000475243 PARVAQ9NVD7 372 aa11.62□□□□□ -0.55
VAPB-204ENST00000475243 A0A087WUV0 522 aaPredicted RBP11.62□□□□□ -0.55
VAPB-204ENST00000475243 SRBD1Q8N5C6 995 aaKnown RBP11.62□□□□□ -0.55
VAPB-204ENST00000475243 CPA5Q8WXQ8 436 aa11.62□□□□□ -0.55
VAPB-204ENST00000475243 TGS1Q96RS0 853 aaKnown RBP11.62□□□□□ -0.55
VAPB-204ENST00000475243 NEUROG2Q9H2A3 272 aa11.62□□□□□ -0.55
VAPB-204ENST00000475243 JPH1Q9HDC5 661 aaPredicted RBP11.62□□□□□ -0.55
VAPB-204ENST00000475243 AIPL1Q9NZN9 384 aa11.62□□□□□ -0.55
VAPB-204ENST00000475243 SERPIND1P05546 499 aa11.62□□□□□ -0.55
VAPB-204ENST00000475243 BRAFP15056 766 aa11.62□□□□□ -0.55
VAPB-204ENST00000475243 LDHDQ86WU2 507 aa11.62□□□□□ -0.55
VAPB-204ENST00000475243 TMCC1O94876 653 aa11.61□□□□□ -0.55
VAPB-204ENST00000475243 CTSHP09668 335 aa11.61□□□□□ -0.55
VAPB-204ENST00000475243 FGFR4P22455 802 aa11.61□□□□□ -0.55
VAPB-204ENST00000475243 DMTNQ08495 405 aa11.61□□□□□ -0.55
VAPB-204ENST00000475243 ZC3H12BQ5HYM0 836 aaKnown RBP11.61□□□□□ -0.55
VAPB-204ENST00000475243 RAET1EQ8TD07 263 aa11.61□□□□□ -0.55
VAPB-204ENST00000475243 POLRMTO00411 1230 aaKnown RBP11.61□□□□□ -0.55
VAPB-204ENST00000475243 ZNF185O15231 689 aa11.61□□□□□ -0.55
VAPB-204ENST00000475243 HLA-DPA1P20036 260 aa11.61□□□□□ -0.55
VAPB-204ENST00000475243 AARSP49588 968 aaKnown RBP eCLIP11.61□□□□□ -0.55
VAPB-204ENST00000475243 PRAMEF18Q5VWM3 479 aa11.61□□□□□ -0.55
VAPB-204ENST00000475243 AP1ARQ63HQ0 302 aa11.61□□□□□ -0.55
VAPB-204ENST00000475243 TTC23LQ6PF05 361 aa11.61□□□□□ -0.55
VAPB-204ENST00000475243 DYRK4Q9NR20 520 aa11.61□□□□□ -0.55
VAPB-204ENST00000475243 TYK2P29597 1187 aa11.61□□□□□ -0.55
VAPB-204ENST00000475243 CCDC85BQ15834 202 aaPredicted RBP11.61□□□□□ -0.55
VAPB-204ENST00000475243 KLHL38Q2WGJ6 581 aa11.61□□□□□ -0.55
VAPB-204ENST00000475243 FAM117BQ6P1L5 589 aa11.61□□□□□ -0.55
VAPB-204ENST00000475243 DHX40Q8IX18 779 aaKnown RBP11.61□□□□□ -0.55
VAPB-204ENST00000475243 TAGAPQ8N103 731 aa11.61□□□□□ -0.55
VAPB-204ENST00000475243 CEP70Q8NHQ1 597 aa11.61□□□□□ -0.55
VAPB-204ENST00000475243 RFWD2Q8NHY2 731 aa11.61□□□□□ -0.55
VAPB-204ENST00000475243 TXNP10599 105 aaKnown RBP11.61□□□□□ -0.55
VAPB-204ENST00000475243 HOXD10P28358 340 aa11.61□□□□□ -0.55
VAPB-204ENST00000475243 FAM84BQ96KN1 310 aaPredicted RBP11.61□□□□□ -0.55
VAPB-204ENST00000475243 SYNDIG1Q9H7V2 258 aa11.61□□□□□ -0.55
VAPB-204ENST00000475243 ZC3H4Q9UPT8 1303 aaKnown RBP11.61□□□□□ -0.55
VAPB-204ENST00000475243 RNF103-CHMP3A0A140T963 221 aa11.61□□□□□ -0.55
VAPB-204ENST00000475243 APOL1O14791 398 aa11.61□□□□□ -0.55
VAPB-204ENST00000475243 HOXA7P31268 230 aaPredicted RBP11.61□□□□□ -0.55
VAPB-204ENST00000475243 CLEC10AQ8IUN9 316 aa11.61□□□□□ -0.55
VAPB-204ENST00000475243 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.61□□□□□ -0.55
VAPB-204ENST00000475243 CENPKQ9BS16 269 aa11.61□□□□□ -0.55
VAPB-204ENST00000475243 WNT8AQ9H1J5 351 aa11.61□□□□□ -0.55
VAPB-204ENST00000475243 QRICH2Q9H0J4 1663 aa11.61□□□□□ -0.55
VAPB-204ENST00000475243 EIF3EP60228 445 aaKnown RBP11.61□□□□□ -0.55
VAPB-204ENST00000475243 HAUS6Q7Z4H7 955 aa11.61□□□□□ -0.55
VAPB-204ENST00000475243 RHOT1Q8IXI2 618 aa11.61□□□□□ -0.55
VAPB-204ENST00000475243 SPATA31A3Q5VYP0 1347 aa11.6□□□□□ -0.55
VAPB-204ENST00000475243 USP27XA6NNY8 438 aa11.6□□□□□ -0.55
VAPB-204ENST00000475243 SCP2P22307 547 aa11.6□□□□□ -0.55
VAPB-204ENST00000475243 CHRNA3P32297 505 aa11.6□□□□□ -0.55
VAPB-204ENST00000475243 BLVRAP53004 296 aa11.6□□□□□ -0.55
VAPB-204ENST00000475243 SESN2P58004 480 aaPredicted RBP11.6□□□□□ -0.55
VAPB-204ENST00000475243 FOXO4P98177 505 aa11.6□□□□□ -0.55
VAPB-204ENST00000475243 ZNF235Q14590 738 aa11.6□□□□□ -0.55
VAPB-204ENST00000475243 ST13P4Q8IZP2 240 aaPredicted RBP11.6□□□□□ -0.55
VAPB-204ENST00000475243 TMEM60Q9H2L4 133 aa11.6□□□□□ -0.55
VAPB-204ENST00000475243 AMACRQ9UHK6 382 aa11.6□□□□□ -0.55
VAPB-204ENST00000475243 ADGRL3Q9HAR2 1447 aa11.6□□□□□ -0.55
VAPB-204ENST00000475243 GTPBP10A4D1E9 387 aaKnown RBP11.6□□□□□ -0.55
VAPB-204ENST00000475243 CLCA2Q9UQC9 943 aa11.6□□□□□ -0.55
VAPB-204ENST00000475243 PCDHA10Q9Y5I2 948 aa11.6□□□□□ -0.55
VAPB-204ENST00000475243 KIF28PB7ZC32 967 aa11.6□□□□□ -0.55
VAPB-204ENST00000475243 TADA2AO75478 443 aa11.6□□□□□ -0.55
VAPB-204ENST00000475243 SHC4Q6S5L8 630 aa11.6□□□□□ -0.55
VAPB-204ENST00000475243 MB21D2Q8IYB1 491 aaPredicted RBP11.6□□□□□ -0.55
VAPB-204ENST00000475243 YIPF2Q9BWQ6 316 aa11.6□□□□□ -0.55
VAPB-204ENST00000475243 SEL1LQ9UBV2 794 aa11.6□□□□□ -0.55
VAPB-204ENST00000475243 GGT7Q9UJ14 662 aa11.6□□□□□ -0.55
VAPB-204ENST00000475243 LAMC1P11047 1609 aa11.6□□□□□ -0.55
VAPB-204ENST00000475243 APRTP07741 180 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms