RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 LRRC63Q05C16 580 aa10.95□□□□□ -0.66
COL8A1-206ENST00000474648 MCL1Q07820 350 aa10.95□□□□□ -0.66
COL8A1-206ENST00000474648 NFX1Q12986 1120 aaKnown RBP10.95□□□□□ -0.66
COL8A1-206ENST00000474648 MYBPC2Q14324 1141 aa10.95□□□□□ -0.66
COL8A1-206ENST00000474648 EDRF1Q3B7T1 1238 aa10.95□□□□□ -0.66
COL8A1-206ENST00000474648 PLEKHG4Q58EX7 1191 aa10.95□□□□□ -0.66
COL8A1-206ENST00000474648 SPATA1Q5VX52 437 aa10.95□□□□□ -0.66
COL8A1-206ENST00000474648 SLFN12LQ6IEE8 588 aa10.95□□□□□ -0.66
COL8A1-206ENST00000474648 MFSD5Q6N075 450 aa10.95□□□□□ -0.66
COL8A1-206ENST00000474648 LRRC55Q6ZSA7 311 aa10.95□□□□□ -0.66
COL8A1-206ENST00000474648 IRF2BP1Q8IU81 584 aa10.95□□□□□ -0.66
COL8A1-206ENST00000474648 ZSWIM2Q8NEG5 633 aa10.95□□□□□ -0.66
COL8A1-206ENST00000474648 DBF4BQ8NFT6 615 aa10.95□□□□□ -0.66
COL8A1-206ENST00000474648 GOLGA5Q8TBA6 731 aa10.95□□□□□ -0.66
COL8A1-206ENST00000474648 BICD1Q96G01 975 aa10.95□□□□□ -0.66
COL8A1-206ENST00000474648 HTATIP2Q9BUP3 242 aa10.95□□□□□ -0.66
COL8A1-206ENST00000474648 NAT10Q9H0A0 1025 aaKnown RBP10.95□□□□□ -0.66
COL8A1-206ENST00000474648 HSD3B7Q9H2F3 369 aa10.95□□□□□ -0.66
COL8A1-206ENST00000474648 PCIF1Q9H4Z3 704 aa10.95□□□□□ -0.66
COL8A1-206ENST00000474648 PRDM5Q9NQX1 630 aaPredicted RBP10.95□□□□□ -0.66
COL8A1-206ENST00000474648 CHST12Q9NRB3 414 aa10.95□□□□□ -0.66
COL8A1-206ENST00000474648 BICDL2A1A5D9 508 aa10.94□□□□□ -0.66
COL8A1-206ENST00000474648 IKBKBO14920 756 aa10.94□□□□□ -0.66
COL8A1-206ENST00000474648 HNRNPDLO14979 420 aaKnown RBP10.94□□□□□ -0.66
COL8A1-206ENST00000474648 N4BP3O15049 544 aa10.94□□□□□ -0.66
COL8A1-206ENST00000474648 FAM189A1O60320 539 aa10.94□□□□□ -0.66
COL8A1-206ENST00000474648 MCF2P10911 925 aa10.94□□□□□ -0.66
COL8A1-206ENST00000474648 RAG1P15918 1043 aa10.94□□□□□ -0.66
COL8A1-206ENST00000474648 RFC2P35250 354 aa10.94□□□□□ -0.66
COL8A1-206ENST00000474648 FAM189BP81408 668 aa10.94□□□□□ -0.66
COL8A1-206ENST00000474648 FKBP3Q00688 224 aaKnown RBP10.94□□□□□ -0.66
COL8A1-206ENST00000474648 NCBP1Q09161 790 aaKnown RBP10.94□□□□□ -0.66
COL8A1-206ENST00000474648 PAK2Q13177 524 aa10.94□□□□□ -0.66
COL8A1-206ENST00000474648 ADAM9Q13443 819 aa10.94□□□□□ -0.66
COL8A1-206ENST00000474648 MPZL3Q6UWV2 235 aa10.94□□□□□ -0.66
COL8A1-206ENST00000474648 CRELD2Q6UXH1 353 aaPredicted RBP10.94□□□□□ -0.66
COL8A1-206ENST00000474648 HS2ST1Q7LGA3 356 aa10.94□□□□□ -0.66
COL8A1-206ENST00000474648 ZBTB33Q86T24 672 aa10.94□□□□□ -0.66
COL8A1-206ENST00000474648 C7orf61Q8IZ16 206 aa10.94□□□□□ -0.66
COL8A1-206ENST00000474648 FAM200AQ8TCP9 573 aa10.94□□□□□ -0.66
COL8A1-206ENST00000474648 CCDC51Q96ER9 411 aa10.94□□□□□ -0.66
COL8A1-206ENST00000474648 EEF2KMTQ96G04 330 aa10.94□□□□□ -0.66
COL8A1-206ENST00000474648 FBXL18Q96ME1 805 aa10.94□□□□□ -0.66
COL8A1-206ENST00000474648 TSG101Q99816 390 aa10.94□□□□□ -0.66
COL8A1-206ENST00000474648 EIF2AQ9BY44 585 aaKnown RBP10.94□□□□□ -0.66
COL8A1-206ENST00000474648 IFIH1Q9BYX4 1025 aaKnown RBP10.94□□□□□ -0.66
COL8A1-206ENST00000474648 RBSNQ9H1K0 784 aa10.94□□□□□ -0.66
COL8A1-206ENST00000474648 CDT1Q9H211 546 aa10.94□□□□□ -0.66
COL8A1-206ENST00000474648 HSPBP1Q9NZL4 362 aa10.94□□□□□ -0.66
COL8A1-206ENST00000474648 PIN4Q9Y237 131 aaKnown RBP10.94□□□□□ -0.66
COL8A1-206ENST00000474648 ENPP3O14638 875 aa10.93□□□□□ -0.66
COL8A1-206ENST00000474648 CLDN3O15551 220 aa10.93□□□□□ -0.66
COL8A1-206ENST00000474648 EVI5O60447 810 aa10.93□□□□□ -0.66
COL8A1-206ENST00000474648 CSF2RAP15509 400 aa10.93□□□□□ -0.66
COL8A1-206ENST00000474648 NR2F2P24468 414 aa10.93□□□□□ -0.66
COL8A1-206ENST00000474648 RPL13P26373 211 aaKnown RBP10.93□□□□□ -0.66
COL8A1-206ENST00000474648 CASP4P49662 377 aa10.93□□□□□ -0.66
COL8A1-206ENST00000474648 CYP2J2P51589 502 aa10.93□□□□□ -0.66
COL8A1-206ENST00000474648 MCCD1P59942 119 aaPredicted RBP10.93□□□□□ -0.66
COL8A1-206ENST00000474648 MYL5Q02045 173 aa10.93□□□□□ -0.66
COL8A1-206ENST00000474648 ZBTB41Q5SVQ8 909 aa10.93□□□□□ -0.66
COL8A1-206ENST00000474648 NOTUMQ6P988 496 aa10.93□□□□□ -0.66
COL8A1-206ENST00000474648 SLC27A1Q6PCB7 646 aa10.93□□□□□ -0.66
COL8A1-206ENST00000474648 FAM43BQ6ZT52 329 aaPredicted RBP10.93□□□□□ -0.66
COL8A1-206ENST00000474648 C16orf59Q7L2K0 433 aa10.93□□□□□ -0.66
COL8A1-206ENST00000474648 FILIP1Q7Z7B0 1213 aa10.93□□□□□ -0.66
COL8A1-206ENST00000474648 DEFB128Q7Z7B8 93 aa10.93□□□□□ -0.66
COL8A1-206ENST00000474648 LUZP1Q86V48 1076 aa10.93□□□□□ -0.66
COL8A1-206ENST00000474648 CSGALNACT2Q8N6G5 542 aa10.93□□□□□ -0.66
COL8A1-206ENST00000474648 AOPEPQ8N6M6 819 aa10.93□□□□□ -0.66
COL8A1-206ENST00000474648 LINC01599Q8WXQ3 324 aa10.93□□□□□ -0.66
COL8A1-206ENST00000474648 POMGNT1Q8WZA1 660 aa10.93□□□□□ -0.66
COL8A1-206ENST00000474648 SEPT8Q92599 483 aa10.93□□□□□ -0.66
COL8A1-206ENST00000474648 DPF3Q92784 378 aa10.93□□□□□ -0.66
COL8A1-206ENST00000474648 BORCS6Q96GS4 357 aa10.93□□□□□ -0.66
COL8A1-206ENST00000474648 CEP63Q96MT8 703 aa10.93□□□□□ -0.66
COL8A1-206ENST00000474648 TCHPQ9BT92 498 aa10.93□□□□□ -0.66
COL8A1-206ENST00000474648 TRAIPQ9BWF2 469 aa10.93□□□□□ -0.66
COL8A1-206ENST00000474648 SRRTQ9BXP5 876 aaKnown RBP10.93□□□□□ -0.66
COL8A1-206ENST00000474648 RGS18Q9NS28 235 aa10.93□□□□□ -0.66
COL8A1-206ENST00000474648 SAMSN1Q9NSI8 373 aaKnown RBP10.93□□□□□ -0.66
COL8A1-206ENST00000474648 FANCLQ9NW38 375 aa10.93□□□□□ -0.66
COL8A1-206ENST00000474648 AGO2Q9UKV8 859 aaKnown RBP10.93□□□□□ -0.66
COL8A1-206ENST00000474648 NFE2L3Q9Y4A8 694 aa10.93□□□□□ -0.66
COL8A1-206ENST00000474648 GOLGA8IPA6NC78 632 aa10.92□□□□□ -0.66
COL8A1-206ENST00000474648 GOLGA8JA6NMD2 632 aa10.92□□□□□ -0.66
COL8A1-206ENST00000474648 SMTNL1A8MU46 457 aa10.92□□□□□ -0.66
COL8A1-206ENST00000474648 KIAA0391O15091 583 aaKnown RBP10.92□□□□□ -0.66
COL8A1-206ENST00000474648 CETN3O15182 167 aa10.92□□□□□ -0.66
COL8A1-206ENST00000474648 OGTO15294 1046 aa10.92□□□□□ -0.66
COL8A1-206ENST00000474648 MEFVO15553 781 aaPredicted RBP10.92□□□□□ -0.66
COL8A1-206ENST00000474648 EXTL3O43909 919 aa10.92□□□□□ -0.66
COL8A1-206ENST00000474648 AKAP3O75969 853 aa10.92□□□□□ -0.66
COL8A1-206ENST00000474648 NPTXRO95502 500 aa10.92□□□□□ -0.66
COL8A1-206ENST00000474648 HARSP12081 509 aaKnown RBP10.92□□□□□ -0.66
COL8A1-206ENST00000474648 ZNF18P17022 549 aa10.92□□□□□ -0.66
COL8A1-206ENST00000474648 ZSCAN20P17040 1043 aaPredicted RBP10.92□□□□□ -0.66
COL8A1-206ENST00000474648 NOLC1Q14978 699 aaKnown RBP eCLIP10.92□□□□□ -0.66
COL8A1-206ENST00000474648 TMEM132AQ24JP5 1023 aa10.92□□□□□ -0.66
COL8A1-206ENST00000474648 DCAF4L1Q3SXM0 396 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms